BLASTX nr result

ID: Rehmannia25_contig00027921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00027921
         (635 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512349.1| chloroplast-targeted copper chaperone, putat...    58   3e-06
ref|XP_002328429.1| predicted protein [Populus trichocarpa] gi|5...    56   1e-05

>ref|XP_002512349.1| chloroplast-targeted copper chaperone, putative [Ricinus communis]
           gi|223548310|gb|EEF49801.1| chloroplast-targeted copper
           chaperone, putative [Ricinus communis]
          Length = 537

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
 Frame = -1

Query: 635 KLEKAGKHAELWGPQKG--QFSVMNNQFIKNIQIEXXXXXXXXXXXXXXXDQHKGGFQVP 462
           KLEK+GKHAELWG  KG   F  + N   KN+Q++                  KGG QV 
Sbjct: 65  KLEKSGKHAELWGAPKGFKNFQNLPNNQFKNMQLDHGKDNKSQKGG-------KGGQQVQ 117

Query: 461 VQMMHQNKGSKDVRFLGKEQHSVKFKL 381
            Q M Q KGSKD++   K+Q SVKF +
Sbjct: 118 HQ-MQQFKGSKDLKMPHKDQKSVKFNM 143


>ref|XP_002328429.1| predicted protein [Populus trichocarpa]
           gi|566169295|ref|XP_006382620.1| hypothetical protein
           POPTR_0005s03840g [Populus trichocarpa]
           gi|550337984|gb|ERP60417.1| hypothetical protein
           POPTR_0005s03840g [Populus trichocarpa]
          Length = 468

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
 Frame = -1

Query: 635 KLEKAGKHAELWGPQKGQ---FSVMNNQFIKNIQIEXXXXXXXXXXXXXXXDQHKGGFQV 465
           +LEK+GKHAELWG QKG     +V+NNQ +KN++I+                  KGG   
Sbjct: 65  QLEKSGKHAELWGGQKGSNNFQNVVNNQ-LKNMKID----GGKGGGGGKDNKSPKGGKGQ 119

Query: 464 PVQMMHQNKGSKDVRF-LGKEQHSVKFKLPQHN 369
            VQ M Q KGSKDV+    K+Q +V+F + + +
Sbjct: 120 QVQTMQQMKGSKDVKMPPNKDQKAVRFNVNEED 152


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