BLASTX nr result

ID: Rehmannia25_contig00027902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00027902
         (488 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269079.1| PREDICTED: phylloplanin [Vitis vinifera] gi|...    58   1e-06
ref|XP_006368028.1| PREDICTED: repetitive proline-rich cell wall...    57   2e-06
ref|XP_002883018.1| predicted protein [Arabidopsis lyrata subsp....    56   4e-06
ref|XP_006298733.1| hypothetical protein CARUB_v10014831mg [Caps...    55   7e-06

>ref|XP_002269079.1| PREDICTED: phylloplanin [Vitis vinifera]
           gi|296083359|emb|CBI22995.3| unnamed protein product
           [Vitis vinifera]
          Length = 156

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
 Frame = +2

Query: 59  FFLIAVLFAAATPIANAQIFNLFN--LNGLSVNGQICCTSTGNCPDQGIA-----GAVVK 217
           FF + V  AAA P+A AQ+ N+    L+ + + G + CT+ GN    G A      A V+
Sbjct: 8   FFSLLVAVAAA-PVAEAQLGNIIGSILDLIRIQGNLFCTANGNMGVNGTATPVFPNAPVQ 66

Query: 218 LNCSRFFGASTTIGQNTTNANGFFNITVPRGQGLFLGLPIFPIVPCVATVQLPLDAAVCS 397
           L C    GA   I   TTN+ G F+I +   Q L   L    +  C   V  PL  + C+
Sbjct: 67  LQC----GAGNVISSATTNSAGLFSILLDPLQFLLSSL----LTNCNLVVNTPL--STCN 116

Query: 398 ALSTTSGALVSGVRGVGALVLGTL 469
           +   +SGAL+S +R +G  + G L
Sbjct: 117 SGLPSSGALLSPLRLIGNTLQGPL 140


>ref|XP_006368028.1| PREDICTED: repetitive proline-rich cell wall protein 2-like
           [Solanum tuberosum]
          Length = 415

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/116 (32%), Positives = 58/116 (50%)
 Frame = +2

Query: 140 LSVNGQICCTSTGNCPDQGIAGAVVKLNCSRFFGASTTIGQNTTNANGFFNITVPRGQGL 319
           +++ G + C+++GN P  GI G  V + C      +TT+ Q  TN  G  N+T+     +
Sbjct: 298 ITIRGVVSCSTSGNAPGPGIGGVNVAIICG-----NTTLAQVITNVEGLINVTLSTNTNI 352

Query: 320 FLGLPIFPIVPCVATVQLPLDAAVCSALSTTSGALVSGVRGVGALVLGTLGRVLNA 487
             G      + CVA   LP+    C+ L  TSG L + +  VG +V G  G VL+A
Sbjct: 353 LFGNT--STLSCVARAALPI--VNCTVL-PTSGILQAPLMLVGNIVQGVSGVVLSA 403


>ref|XP_002883018.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328858|gb|EFH59277.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 155

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
 Frame = +2

Query: 44  NYAFTFFLIAVLFAAATPIANAQIFNLFNLNGLSVNGQICCTSTGNCPDQG-----IAGA 208
           N   TF L       A+P+ANAQI  L  +N   +NG + CT  G  P  G      A A
Sbjct: 6   NKHITFSLFLFCLIVASPMANAQI-GLGGINVPIINGVLFCTING-APLNGTSATAFANA 63

Query: 209 VVKLNCSRFFGASTTIGQNTTNANGFFNITVPRGQGLFLGLPIFPIVPCVATVQLPLDAA 388
           VV+L C      +T + +  T+  G F  +     G+ + LP   +  C   V  P  + 
Sbjct: 64  VVQLQCGSL---NTVVAETITSITGLFTFSTT---GIQISLPTL-LNDCRIVVPTPRSS- 115

Query: 389 VCSALSTTSGALVSGVRGVGALVLGTLGRV 478
            CS+   ++G LVS +R VG+L+ G L  V
Sbjct: 116 -CSSTLPSTGQLVSQLRIVGSLISGLLNIV 144


>ref|XP_006298733.1| hypothetical protein CARUB_v10014831mg [Capsella rubella]
           gi|482567442|gb|EOA31631.1| hypothetical protein
           CARUB_v10014831mg [Capsella rubella]
          Length = 153

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
 Frame = +2

Query: 44  NYAFTFFLIAVLFAAATPIANAQIFNLFNLNGLSVNGQICCTSTGNCPDQG------IAG 205
           N   +F L+ +     +P+A AQ+ N  NL    V G + CT  G  P  G       A 
Sbjct: 6   NKHISFSLVLLCLIVVSPMAMAQLPNFLNLP--LVTGLLSCTVNG-APLNGTSTTPAFAN 62

Query: 206 AVVKLNCSRFFGASTTIGQNTTNANGFFNITVPRGQGLFLGLPIFPIVPCVATVQLPLDA 385
           A+V+L C      +T + Q TTN  G F ++         G    P +     V +P   
Sbjct: 63  AIVQLQCG---SQNTVVSQTTTNVAGIFTLST--------GALSIPALLSGCRVVVPTPR 111

Query: 386 AVCSALSTTSGALVSGVRGVGALVLGTLGRV 478
           A C+A   + G L+S +  VG+LV G L  V
Sbjct: 112 ASCNATLPSVGQLISPLMAVGSLVSGILNIV 142


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