BLASTX nr result
ID: Rehmannia25_contig00027801
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00027801
(494 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC19420.1| RING-H2 finger protein ATL54 [Morus notabilis] 63 3e-08
ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vit... 61 1e-07
ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854... 60 4e-07
ref|XP_003545702.1| PREDICTED: RING-H2 finger protein ATL54-like... 60 4e-07
gb|ACU18813.1| unknown [Glycine max] 60 4e-07
ref|XP_002301077.1| zinc finger family protein [Populus trichoca... 60 4e-07
gb|EOY15913.1| RING/U-box superfamily protein, putative [Theobro... 59 5e-07
ref|XP_002513984.1| ring finger protein, putative [Ricinus commu... 59 7e-07
ref|XP_002323964.2| hypothetical protein POPTR_0017s07650g [Popu... 59 9e-07
ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like... 59 9e-07
emb|CBI19211.3| unnamed protein product [Vitis vinifera] 59 9e-07
emb|CBI34030.3| unnamed protein product [Vitis vinifera] 59 9e-07
ref|XP_002522602.1| ring finger protein, putative [Ricinus commu... 59 9e-07
emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera] 59 9e-07
ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like... 58 1e-06
ref|XP_004155494.1| PREDICTED: RING-H2 finger protein ATL54-like... 57 2e-06
ref|XP_004137067.1| PREDICTED: RING-H2 finger protein ATL54-like... 57 2e-06
ref|XP_003531024.1| PREDICTED: RING-H2 finger protein ATL54-like... 57 3e-06
ref|XP_004250123.1| PREDICTED: RING-H2 finger protein ATL54-like... 56 6e-06
ref|XP_004250122.1| PREDICTED: RING-H2 finger protein ATL54-like... 56 6e-06
>gb|EXC19420.1| RING-H2 finger protein ATL54 [Morus notabilis]
Length = 368
Score = 63.2 bits (152), Expect = 3e-08
Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +3
Query: 177 CINPPSQ-------NHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPP 335
CI+PP+ +H+ S FL V I N+SR +S
Sbjct: 46 CISPPTSVISYSHNHHKFSTFLTVTIVLLAASFLVICGYVFYTKYY---NNSRRRNSSRQ 102
Query: 336 SDNDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
SD+ +N + FLDE P + DHPIW+IRT GL ++INSI V YKKGE L
Sbjct: 103 SDH-RNRDDHEFLDEEHGPTL-DHPIWYIRTAGLQPSIINSIAVLKYKKGEGL 153
>ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]
Length = 379
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/104 (31%), Positives = 53/104 (50%)
Frame = +3
Query: 183 NPPSQNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPPSDNDQNPGE 362
+PP + +LSP+L++ + SR + P++
Sbjct: 53 SPPRKAEKLSPYLVICLSVLATTFFVVFLYVFYKKYYSRRRLSRRRNSQAPAEG----AH 108
Query: 363 DHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
D F+DE Q PV +DHPIW+IRT+GL +VI++I + YK+G+ L
Sbjct: 109 DDFIDEDQEPV-VDHPIWYIRTVGLQPSVISAITICKYKRGDGL 151
>ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854068 [Vitis vinifera]
Length = 372
Score = 59.7 bits (143), Expect = 4e-07
Identities = 37/103 (35%), Positives = 50/103 (48%)
Frame = +3
Query: 186 PPSQNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPPSDNDQNPGED 365
PP + H++SP LI ++C N SR + PP QN +
Sbjct: 27 PPLRPHEISPILIFIVCTLGAVFFVVSCCTVVLKYYSGWNRSRRS--DPPV---QNHTHE 81
Query: 366 HFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
F+DE Q PV+ HPIW I T+GL ++VI+ I V Y K E L
Sbjct: 82 DFIDEEQSPVVY-HPIWLINTVGLQQSVIDLITVIKYNKEEGL 123
>ref|XP_003545702.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
Length = 385
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +3
Query: 342 NDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
N + +D F+DE P M+DHPIW+IRT+GL +++IN+I V YKKGE L
Sbjct: 112 NQTHHDDDDFVDEENGP-MVDHPIWYIRTLGLQQSIINAITVCKYKKGEGL 161
>gb|ACU18813.1| unknown [Glycine max]
Length = 385
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = +3
Query: 342 NDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
N + +D F+DE P M+DHPIW+IRT+GL +++IN+I V YKKGE L
Sbjct: 112 NQTHHDDDDFVDEENGP-MVDHPIWYIRTLGLQQSIINAITVCKYKKGEGL 161
>ref|XP_002301077.1| zinc finger family protein [Populus trichocarpa]
gi|222842803|gb|EEE80350.1| zinc finger family protein
[Populus trichocarpa]
Length = 389
Score = 59.7 bits (143), Expect = 4e-07
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Frame = +3
Query: 162 SDCYSCINPPS-----QNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTIN 326
SD Y PP Q H LSP++I+++ SR
Sbjct: 37 SDYYLLPPPPPPPFLPQEHHLSPYVIIIVALLASFFLIVSYYVIVAKSCSGWCGSRNNTE 96
Query: 327 SPPSDNDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
++D ++ FLDE + +DHPIW I TIGL +++INSI V YKKGE L
Sbjct: 97 PQAQEDDT---DEEFLDENR----VDHPIWFITTIGLQQSIINSITVCKYKKGEGL 145
>gb|EOY15913.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 394
Score = 59.3 bits (142), Expect = 5e-07
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Frame = +3
Query: 186 PPS---QNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPPSDNDQNP 356
PPS QNH +SP++I+++ SR P + D +
Sbjct: 45 PPSLSDQNHYISPYVIILVSVLASFFLLIGYYVIIVKSCFGLCWSRNN-RQPQAQTDGS- 102
Query: 357 GEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
++ FLDE + +DHPIW I T+GL +++INSI V YKKGE L
Sbjct: 103 -DEEFLDENR----VDHPIWFITTVGLQQSIINSITVCKYKKGEGL 143
>ref|XP_002513984.1| ring finger protein, putative [Ricinus communis]
gi|223547070|gb|EEF48567.1| ring finger protein,
putative [Ricinus communis]
Length = 393
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/100 (36%), Positives = 49/100 (49%)
Frame = +3
Query: 195 QNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPPSDNDQNPGEDHFL 374
Q H LSP++I+++ SR +P S+ D ++ FL
Sbjct: 53 QEHHLSPYVIILVSVLASFFLVVSYYVIIAKSCPGWCSSRNN-RAPQSEADNT--DEEFL 109
Query: 375 DELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
DE Q +DHPIW I T GL +++INSI V YKKGE L
Sbjct: 110 DENQ----VDHPIWFITTAGLQQSIINSITVCKYKKGEGL 145
>ref|XP_002323964.2| hypothetical protein POPTR_0017s07650g [Populus trichocarpa]
gi|550319719|gb|EEF04097.2| hypothetical protein
POPTR_0017s07650g [Populus trichocarpa]
Length = 338
Score = 58.5 bits (140), Expect = 9e-07
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Frame = +3
Query: 165 DCYSCINPP--SQNHQLSPFLIVMICXXXXXXXXXXXXXXXXXXXXXXNHSRTTINSPPS 338
DC+ C++ P SQ+H+L + MI S +
Sbjct: 6 DCFDCLDAPTASQHHKLGKIALAMIVLSAIALVLACCVIYVKFIRKRRRRSSSQ-QEDDE 64
Query: 339 DNDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
+ + D +D+ Q PV +DHPIW+IRT+GL +VI+SI V YK G+ L
Sbjct: 65 EEQRIETRDQLVDQDQGPV-VDHPIWYIRTVGLQPSVISSITVCKYKSGDGL 115
>ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like [Vitis vinifera]
Length = 404
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +3
Query: 327 SPPSDNDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
SPPS++D ++ FLDE + P IDHPIW I T GL + +INSI V YK+GE L
Sbjct: 102 SPPSESDGR--DEEFLDENRGPA-IDHPIWFITTAGLQQAIINSITVCKYKRGEGL 154
>emb|CBI19211.3| unnamed protein product [Vitis vinifera]
Length = 318
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +3
Query: 327 SPPSDNDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
SPPS++D ++ FLDE + P IDHPIW I T GL + +INSI V YK+GE L
Sbjct: 124 SPPSESDGR--DEEFLDENRGPA-IDHPIWFITTAGLQQAIINSITVCKYKRGEGL 176
>emb|CBI34030.3| unnamed protein product [Vitis vinifera]
Length = 284
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +3
Query: 342 NDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
ND D F+DE Q PV +DHPIW+IRT+GL +VI++I + YK+G+ L
Sbjct: 28 NDSGISHDDFIDEDQEPV-VDHPIWYIRTVGLQPSVISAITICKYKRGDGL 77
>ref|XP_002522602.1| ring finger protein, putative [Ricinus communis]
gi|223538078|gb|EEF39689.1| ring finger protein,
putative [Ricinus communis]
Length = 378
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/62 (46%), Positives = 38/62 (61%)
Frame = +3
Query: 309 SRTTINSPPSDNDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGE 488
SR +S P D + FLDE P++ DHP+W+I TIGL +VINSI V YK+G+
Sbjct: 90 SRRGRSSQPQDQRNETTHEEFLDEDHGPIL-DHPVWYINTIGLQPSVINSISVCKYKRGD 148
Query: 489 SL 494
L
Sbjct: 149 GL 150
>emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]
Length = 404
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +3
Query: 327 SPPSDNDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
SPPS++D ++ FLDE + P IDHPIW I T GL + +INSI V YK+GE L
Sbjct: 102 SPPSESDGR--DEEFLDENRGPA-IDHPIWFITTAGLQQAIINSITVCKYKRGEGL 154
>ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
Length = 403
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Frame = +3
Query: 309 SRTTINSPPSDNDQNP---GEDHFLD-ELQRPVMIDHPIWHIRTIGLPETVINSIPVFNY 476
SR ++SP + Q +D F+D E M+DHPIW+IRT+GL +++IN+I V Y
Sbjct: 110 SRRRVSSPSTSRRQTQTHHDDDDFVDDEEHHGRMVDHPIWYIRTLGLQQSIINAITVCKY 169
Query: 477 KKGESL 494
KKGE L
Sbjct: 170 KKGEGL 175
>ref|XP_004155494.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
Length = 360
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/54 (57%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Frame = +3
Query: 345 DQNPGEDH----FLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
D P E H FLDE Q PV+ DHPIW+IRTIGLP VI++I V +K GE L
Sbjct: 110 DPPPPETHHQHDFLDEEQGPVL-DHPIWYIRTIGLPPAVIDAIAVCKFKSGEGL 162
>ref|XP_004137067.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
Length = 360
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/54 (57%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Frame = +3
Query: 345 DQNPGEDH----FLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
D P E H FLDE Q PV+ DHPIW+IRTIGLP VI++I V +K GE L
Sbjct: 110 DPPPPETHHQHDFLDEEQGPVL-DHPIWYIRTIGLPPAVIDAIAVCKFKSGEGL 162
>ref|XP_003531024.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
Length = 358
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/60 (46%), Positives = 38/60 (63%)
Frame = +3
Query: 315 TTINSPPSDNDQNPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKGESL 494
TT++ P + E +FLDE + ++DHPIW+IRT GL + VI +I V NYKK E L
Sbjct: 101 TTLSQPQT-------EQYFLDEEEHGPVVDHPIWYIRTTGLQQAVITAITVCNYKKDEGL 153
>ref|XP_004250123.1| PREDICTED: RING-H2 finger protein ATL54-like isoform 2 [Solanum
lycopersicum]
Length = 400
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +3
Query: 312 RTTINSPPSDNDQ--NPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKG 485
R+ NS P++ Q ED +DE P M+DHPIW+IRT+GL + VI+SI VF Y+K
Sbjct: 96 RSRSNSRPNNVSQFDETREDFVIDENLGP-MLDHPIWYIRTVGLGQDVIDSITVFKYRKD 154
Query: 486 ESL 494
E L
Sbjct: 155 EFL 157
>ref|XP_004250122.1| PREDICTED: RING-H2 finger protein ATL54-like isoform 1 [Solanum
lycopersicum]
Length = 418
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +3
Query: 312 RTTINSPPSDNDQ--NPGEDHFLDELQRPVMIDHPIWHIRTIGLPETVINSIPVFNYKKG 485
R+ NS P++ Q ED +DE P M+DHPIW+IRT+GL + VI+SI VF Y+K
Sbjct: 96 RSRSNSRPNNVSQFDETREDFVIDENLGP-MLDHPIWYIRTVGLGQDVIDSITVFKYRKD 154
Query: 486 ESL 494
E L
Sbjct: 155 EFL 157