BLASTX nr result
ID: Rehmannia25_contig00027718
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00027718
(560 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v... 279 3e-73
emb|CBI26376.3| unnamed protein product [Vitis vinifera] 279 3e-73
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso... 276 2e-72
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso... 276 2e-72
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci... 271 8e-71
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr... 271 8e-71
ref|XP_002315726.1| predicted protein [Populus trichocarpa] 269 3e-70
dbj|BAF03494.1| XRCC4 homolog [Populus nigra] 269 3e-70
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ... 266 3e-69
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr... 265 7e-69
ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu... 265 7e-69
gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [The... 264 1e-68
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis] 264 1e-68
gb|EPS69900.1| hypothetical protein M569_04862, partial [Genlise... 261 8e-68
ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Caps... 258 9e-67
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso... 256 3e-66
gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Th... 255 6e-66
gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Th... 254 8e-66
ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidop... 251 1e-64
dbj|BAD43030.1| putative double strand break repair protein (XRC... 251 1e-64
>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
Length = 259
Score = 279 bits (714), Expect = 3e-73
Identities = 130/178 (73%), Positives = 155/178 (87%)
Frame = -3
Query: 534 TPKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWD 355
TP+H+CLKL+IP + EP+F+K TW+P+ F +SITDGLHAW C+A+EDEV+ERA+ WD
Sbjct: 4 TPRHSCLKLQIP---NQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60
Query: 354 QSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKK 175
Q VSDY+ LAE++LGFQQPGSVYGFS+AG+G +RLSWTFEKEGTKLEWRWKC SPDS+
Sbjct: 61 QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120
Query: 174 TTAEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
TTA VLDFLM+ANIRLSEEVV KTQSF+R+K EAEKCLAQSEK N+EK+ FES IY K
Sbjct: 121 TTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAK 178
>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 279 bits (714), Expect = 3e-73
Identities = 130/178 (73%), Positives = 155/178 (87%)
Frame = -3
Query: 534 TPKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWD 355
TP+H+CLKL+IP + EP+F+K TW+P+ F +SITDGLHAW C+A+EDEV+ERA+ WD
Sbjct: 4 TPRHSCLKLQIP---NQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD 60
Query: 354 QSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKK 175
Q VSDY+ LAE++LGFQQPGSVYGFS+AG+G +RLSWTFEKEGTKLEWRWKC SPDS+
Sbjct: 61 QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS 120
Query: 174 TTAEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
TTA VLDFLM+ANIRLSEEVV KTQSF+R+K EAEKCLAQSEK N+EK+ FES IY K
Sbjct: 121 TTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAK 178
>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
tuberosum]
Length = 267
Score = 276 bits (707), Expect = 2e-72
Identities = 130/178 (73%), Positives = 150/178 (84%)
Frame = -3
Query: 534 TPKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWD 355
+PKHTCLKL I E +FVKGTW+ + FD+ ITDGL +WTCHA+E+EV+ERAS WD
Sbjct: 5 SPKHTCLKLVI----SNKEQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERASQWD 60
Query: 354 QSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKK 175
Q VS+Y+DLAEKYLGFQQPGS YGF +AG G KRLSWTFEKEGTKLEWRWKCQPS +SKK
Sbjct: 61 QPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQPSSNSKK 120
Query: 174 TTAEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
TTA++LDFLMDANIRLS+EVV KT+SF+R+K EAEKCL QSEKL+ EK FES IY K
Sbjct: 121 TTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSREKEEFESAIYAK 178
>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
lycopersicum]
Length = 254
Score = 276 bits (706), Expect = 2e-72
Identities = 130/178 (73%), Positives = 150/178 (84%)
Frame = -3
Query: 534 TPKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWD 355
+PKHTCLKL I E +FVKGTW+ + FD+ ITDGLH+WTCHA+E+EV+ERAS WD
Sbjct: 5 SPKHTCLKLVI----SNKEQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERASQWD 60
Query: 354 QSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKK 175
Q VS+Y+DL EKYLGFQQPGSVYGF +AG G KRLSWTFEKEGTKLEWRWKCQ S +SKK
Sbjct: 61 QPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLEWRWKCQSSSNSKK 120
Query: 174 TTAEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
TTA++LDFLMDANIRLS+EVV KT+SF+R+K EAEKCL QSEKL+ EK FES IY K
Sbjct: 121 TTADILDFLMDANIRLSDEVVSKTESFERMKVEAEKCLTQSEKLSKEKEEFESAIYAK 178
>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
Length = 256
Score = 271 bits (693), Expect = 8e-71
Identities = 124/176 (70%), Positives = 151/176 (85%)
Frame = -3
Query: 528 KHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWDQS 349
+HTCLKLEI +P+FVKGTW+ T FD+SITDGL+ W C+A+E++VK+RA+ WDQ
Sbjct: 4 RHTCLKLEI---SDATDPIFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQWDQP 60
Query: 348 VSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKKTT 169
V++Y+ LAE+YLGFQQPGSVYGF++A +GCKRLSWTFEKEGTKLEWRWKC P+P+SKK T
Sbjct: 61 VTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGPAPNSKKVT 120
Query: 168 AEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
A +LDFLMDANIRLS+EVV KTQSF+R+K EAEKCLAQSE+ N+EK FES IY K
Sbjct: 121 AGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFNNEKLEFESAIYAK 176
>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
gi|557522035|gb|ESR33402.1| hypothetical protein
CICLE_v10005690mg [Citrus clementina]
Length = 256
Score = 271 bits (693), Expect = 8e-71
Identities = 126/180 (70%), Positives = 152/180 (84%)
Frame = -3
Query: 540 MDTPKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASS 361
M+ HTCLKLEIP +P+FVKGTW+ T FD+SITDGL+AW C+A+E++VK+RA+
Sbjct: 1 MEATSHTCLKLEIP---DATDPIFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAL 57
Query: 360 WDQSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDS 181
WDQ V++YV LAE+YLGFQQPGSVYGF++A +GCKRLSWTFEKEGTKLEWRWKC +P+S
Sbjct: 58 WDQPVTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKCGSAPNS 117
Query: 180 KKTTAEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
KK TA +LDFLMDANIRLS+EVV KTQSF+R+K EAEKCLAQSE+ +EK FES IY K
Sbjct: 118 KKVTAGILDFLMDANIRLSDEVVTKTQSFERLKVEAEKCLAQSERFKNEKLEFESAIYAK 177
>ref|XP_002315726.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 269 bits (688), Expect = 3e-70
Identities = 125/176 (71%), Positives = 150/176 (85%)
Frame = -3
Query: 528 KHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWDQS 349
+HTCLKLEIP EP+F+KGTW+P F++SITDGL++W C+ATE+EV++RA+ WDQ
Sbjct: 7 RHTCLKLEIP------EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRDRAAQWDQP 60
Query: 348 VSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKKTT 169
VS Y+ LAEK+LGFQ PGSVY F++AG G KRLSWTFEKEGTKLEWRWKCQPSPD+KKTT
Sbjct: 61 VSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKKTT 120
Query: 168 AEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
+LDFLMDANIRLSEEVV KTQSF+++K EAEKCLAQSEK NS+K FE+ +Y K
Sbjct: 121 TLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYAK 176
>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
Length = 255
Score = 269 bits (688), Expect = 3e-70
Identities = 126/176 (71%), Positives = 149/176 (84%)
Frame = -3
Query: 528 KHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWDQS 349
+HTCLKLEIP EP+F+KGTW+P F++SITDGL++W C+ATE+EV+ RA+ WDQ
Sbjct: 7 RHTCLKLEIP------EPIFIKGTWFPFHFNLSITDGLNSWFCNATEEEVRGRAAQWDQP 60
Query: 348 VSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKKTT 169
VS Y+ LAEK+LGFQ PGSVY F++AG G KRLSWTFEKEGTKLEWRWKCQPSPD+KKTT
Sbjct: 61 VSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLEWRWKCQPSPDTKKTT 120
Query: 168 AEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
+LDFLMDANIRLSEEVV KTQSF+R+K EAEKCLAQSEK NS+K FE+ +Y K
Sbjct: 121 TLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAK 176
>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
putative [Ricinus communis]
Length = 265
Score = 266 bits (680), Expect = 3e-69
Identities = 124/179 (69%), Positives = 149/179 (83%)
Frame = -3
Query: 537 DTPKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSW 358
+T +HTCLKLEI EP+FVKGTW+ + F +SITDGL+AW C+ATE +VKERA+ W
Sbjct: 11 ETARHTCLKLEIT------EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKERAAQW 64
Query: 357 DQSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSK 178
DQ VS+Y++LAE YLGFQQPGS+Y F++AG+ KRLSWTFEKEGTKLEWRWKCQPSPD+K
Sbjct: 65 DQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLEWRWKCQPSPDNK 124
Query: 177 KTTAEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
TTA +LDFLMDANIRLSEEVV KT SF+R+K+EA+KCL QSE+ EK+ FES IY K
Sbjct: 125 MTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQSERFAGEKTEFESSIYAK 183
>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
gi|557522040|gb|ESR33407.1| hypothetical protein
CICLE_v10005689mg [Citrus clementina]
Length = 256
Score = 265 bits (676), Expect = 7e-69
Identities = 121/176 (68%), Positives = 149/176 (84%)
Frame = -3
Query: 528 KHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWDQS 349
+HTCLKLEIP +P+F KGTW+ T FD+SITDGL+AW C+A+E++VK+RA+ WDQ
Sbjct: 4 RHTCLKLEIP---DATDPIFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQWDQP 60
Query: 348 VSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKKTT 169
V++Y+ LAE+YLGFQQPGSVYGF++A +GCKRLSWTFEKEGTKLEWRWK P+P+SKK T
Sbjct: 61 VTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLEWRWKFGPAPNSKKVT 120
Query: 168 AEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
A +LDFLMDANIRLS+EVV KTQSF+R+K E +KCLAQSE+ +EK FES IY K
Sbjct: 121 AGILDFLMDANIRLSDEVVTKTQSFERLKVETQKCLAQSERFKNEKVEFESAIYSK 176
>ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus]
gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair
protein XRCC4-like [Cucumis sativus]
Length = 233
Score = 265 bits (676), Expect = 7e-69
Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 2/182 (1%)
Frame = -3
Query: 540 MDTPKHTCLKLEIPMGGGKPE--PVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERA 367
MD +HTCLKLE+P E +FVKGTW RFD+SITDG HAWTCHATEDEV+ RA
Sbjct: 1 MDAIRHTCLKLEVPTNAQPNERSSIFVKGTWNHLRFDLSITDGFHAWTCHATEDEVRLRA 60
Query: 366 SSWDQSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSP 187
+ WDQ SDYV LAE+YLGFQQPGS+Y F++AGNG KRLSWTF+KEG KLEWRWKCQP+
Sbjct: 61 AQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFDKEGMKLEWRWKCQPAS 120
Query: 186 DSKKTTAEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIY 7
D+K TTA +L+FLMDANIRLSEEVV K QS +R+K E+EKCLAQSEK+ EK FE+ IY
Sbjct: 121 DNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQSEKICDEKVEFETAIY 180
Query: 6 GK 1
K
Sbjct: 181 AK 182
>gb|EOY05930.1| DNA repair protein XRCC4, putative isoform 1 [Theobroma cacao]
Length = 263
Score = 264 bits (675), Expect = 1e-68
Identities = 125/178 (70%), Positives = 147/178 (82%)
Frame = -3
Query: 534 TPKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWD 355
T +HTCLKLEIP EP+FVKGTW+ FDISITDGLHAW C+ATE+EVKERA+ WD
Sbjct: 8 TTRHTCLKLEIP----STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQWD 63
Query: 354 QSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKK 175
Q V++Y++LAE+YLGFQQ GSVY F++AG+ KRLSW FEKEGTKLEWRWK +PSPDS+K
Sbjct: 64 QPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSPDSQK 123
Query: 174 TTAEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
T +LDFLMDANIRLSEEV KTQSF+++K EAEKCL QSE+ +EK FESEIY K
Sbjct: 124 ITGGILDFLMDANIRLSEEVFRKTQSFEKLKVEAEKCLEQSERSTNEKMEFESEIYAK 181
>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
Length = 257
Score = 264 bits (674), Expect = 1e-68
Identities = 121/179 (67%), Positives = 150/179 (83%)
Frame = -3
Query: 537 DTPKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSW 358
++ +HTCLKLE +P+FV TW+P+ F++S+TDG HAW CHA+E+EV++RA+ W
Sbjct: 3 ESKRHTCLKLEPK----DSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVRDRAAQW 58
Query: 357 DQSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSK 178
DQ V +YV LAE+YLGFQQP SVY F++AG+G KRLSWTFEKEGTKL+WRWKCQP+PDSK
Sbjct: 59 DQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQWRWKCQPAPDSK 118
Query: 177 KTTAEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
KTTAE LDFLMDANIRLSEEVV K+QSF+R+K EAEKCL QSEK+++EK FES +Y K
Sbjct: 119 KTTAETLDFLMDANIRLSEEVVIKSQSFERLKVEAEKCLEQSEKISNEKMEFESTLYAK 177
>gb|EPS69900.1| hypothetical protein M569_04862, partial [Genlisea aurea]
Length = 203
Score = 261 bits (667), Expect = 8e-68
Identities = 120/175 (68%), Positives = 147/175 (84%), Gaps = 1/175 (0%)
Frame = -3
Query: 522 TCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWDQSVS 343
TCLKL+ GG PEP+F+KGTW+ TRFD+++TDGL AW CHATE+EV ERAS+WDQ+ S
Sbjct: 1 TCLKLDTSAVGGPPEPIFIKGTWFATRFDLAMTDGLQAWVCHATEEEVTERASNWDQNAS 60
Query: 342 DYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEG-TKLEWRWKCQPSPDSKKTTA 166
DYV+ A +YLGFQQPGSVY S+A NGCKR+S+TFEKEG KLEWRWK QPS +SKKTTA
Sbjct: 61 DYVEFAGRYLGFQQPGSVYVVSDAENGCKRVSFTFEKEGMMKLEWRWKLQPSSNSKKTTA 120
Query: 165 EVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
E+++FLMDANIRLSEE++WKT++ D +K E EKC+ QSE+L EK FE+EIYGK
Sbjct: 121 EMMEFLMDANIRLSEEIMWKTKAIDELKLEMEKCVEQSERLCREKIAFETEIYGK 175
>ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Capsella rubella]
gi|482567111|gb|EOA31300.1| hypothetical protein
CARUB_v10014474mg [Capsella rubella]
Length = 249
Score = 258 bits (658), Expect = 9e-67
Identities = 121/176 (68%), Positives = 145/176 (82%)
Frame = -3
Query: 528 KHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWDQS 349
KHTCL+LEI +P+FVKGTWY +RFDIS+TDG +W C+ATE+EV ERA+ WDQ
Sbjct: 8 KHTCLRLEI----SGADPIFVKGTWYHSRFDISVTDGSSSWICNATEEEVAERAAQWDQP 63
Query: 348 VSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKKTT 169
VS+Y++LAE+YLGFQQP S+YGFS+A GCKRLSWTFEKEGTKLEWRWKC+PS DSKK T
Sbjct: 64 VSEYLELAEQYLGFQQPDSIYGFSDALEGCKRLSWTFEKEGTKLEWRWKCKPSHDSKKIT 123
Query: 168 AEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
VLDFLM++NIRLSEEVV KT+SF+++K EAEKCLAQ +KL EK+ FE Y K
Sbjct: 124 VGVLDFLMESNIRLSEEVVNKTRSFEKMKSEAEKCLAQGQKLCKEKTEFEDATYAK 179
>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 259
Score = 256 bits (653), Expect = 3e-66
Identities = 119/177 (67%), Positives = 147/177 (83%)
Frame = -3
Query: 531 PKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWDQ 352
P+ +CLKLE + +P+FVKGTW+ +RFD+SITDGL+AW CHA+ED V++RA+ WDQ
Sbjct: 9 PRQSCLKLEPK----ESQPIFVKGTWFHSRFDLSITDGLNAWVCHASEDAVRDRAAQWDQ 64
Query: 351 SVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKKT 172
V DYV LAE+YLGFQ P SVY F++AG+G KRLSWTF+KEGTKLEWRWKC+PSP+SK+T
Sbjct: 65 PVPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLEWRWKCEPSPNSKET 124
Query: 171 TAEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
TA VLDFLMDAN+ LSEEVV KTQSF+R+K EAE CL QSE++ +EK FES +Y K
Sbjct: 125 TAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEMCLIQSERIANEKIEFESAVYAK 181
>gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
Length = 276
Score = 255 bits (651), Expect = 6e-66
Identities = 125/191 (65%), Positives = 147/191 (76%), Gaps = 13/191 (6%)
Frame = -3
Query: 534 TPKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWD 355
T +HTCLKLEIP EP+FVKGTW+ FDISITDGLHAW C+ATE+EVKERA+ WD
Sbjct: 8 TTRHTCLKLEIP----STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQWD 63
Query: 354 QSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKK 175
Q V++Y++LAE+YLGFQQ GSVY F++AG+ KRLSW FEKEGTKLEWRWK +PSPDS+K
Sbjct: 64 QPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSPDSQK 123
Query: 174 TTAEVLDFLMDANIRLS-------------EEVVWKTQSFDRVKQEAEKCLAQSEKLNSE 34
T +LDFLMDANIRLS EEV KTQSF+++K EAEKCL QSE+ +E
Sbjct: 124 ITGGILDFLMDANIRLSHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLEQSERSTNE 183
Query: 33 KSVFESEIYGK 1
K FESEIY K
Sbjct: 184 KMEFESEIYAK 194
>gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
Length = 277
Score = 254 bits (650), Expect = 8e-66
Identities = 125/192 (65%), Positives = 147/192 (76%), Gaps = 14/192 (7%)
Frame = -3
Query: 534 TPKHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWD 355
T +HTCLKLEIP EP+FVKGTW+ FDISITDGLHAW C+ATE+EVKERA+ WD
Sbjct: 8 TTRHTCLKLEIP----STEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQWD 63
Query: 354 QSVSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKK 175
Q V++Y++LAE+YLGFQQ GSVY F++AG+ KRLSW FEKEGTKLEWRWK +PSPDS+K
Sbjct: 64 QPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFEKEGTKLEWRWKFRPSPDSQK 123
Query: 174 TTAEVLDFLMDANIRLS--------------EEVVWKTQSFDRVKQEAEKCLAQSEKLNS 37
T +LDFLMDANIRLS EEV KTQSF+++K EAEKCL QSE+ +
Sbjct: 124 ITGGILDFLMDANIRLSKHVCVCVCVCVCLQEEVFRKTQSFEKLKVEAEKCLEQSERSTN 183
Query: 36 EKSVFESEIYGK 1
EK FESEIY K
Sbjct: 184 EKMEFESEIYAK 195
>ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidopsis thaliana]
gi|238479872|ref|NP_001154639.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
gi|85701292|sp|Q682V0.2|XRCC4_ARATH RecName: Full=DNA
repair protein XRCC4 gi|9800643|gb|AAF91285.2|AF233528_1
putative double strand break repair protein [Arabidopsis
thaliana] gi|9294200|dbj|BAB02102.1| unnamed protein
product [Arabidopsis thaliana]
gi|332643196|gb|AEE76717.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
gi|332643197|gb|AEE76718.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
Length = 264
Score = 251 bits (640), Expect = 1e-64
Identities = 119/176 (67%), Positives = 143/176 (81%)
Frame = -3
Query: 528 KHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWDQS 349
KHTCL+LEI +P+FVKGTW+ +RFDIS+TDG +W C+ATE+EV ERA+ WDQ
Sbjct: 24 KHTCLRLEI----SGADPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAAQWDQP 79
Query: 348 VSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKKTT 169
VS+Y+ LAE+YLGFQQP SVY FS+A G KRLSWTFEKEGTKLEWRWKC+PS DSKK T
Sbjct: 80 VSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDDSKKIT 139
Query: 168 AEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
+LDFLM+ANIRLSEEVV KT+SF++++ EAE+CLAQ EKL EK+ FES Y K
Sbjct: 140 VGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEKLCDEKTEFESATYAK 195
>dbj|BAD43030.1| putative double strand break repair protein (XRCC4) [Arabidopsis
thaliana] gi|56461768|gb|AAV91340.1| At1g61410
[Arabidopsis thaliana] gi|61656135|gb|AAX49370.1|
At1g61410 [Arabidopsis thaliana]
Length = 248
Score = 251 bits (640), Expect = 1e-64
Identities = 119/176 (67%), Positives = 143/176 (81%)
Frame = -3
Query: 528 KHTCLKLEIPMGGGKPEPVFVKGTWYPTRFDISITDGLHAWTCHATEDEVKERASSWDQS 349
KHTCL+LEI +P+FVKGTW+ +RFDIS+TDG +W C+ATE+EV ERA+ WDQ
Sbjct: 8 KHTCLRLEI----SGADPIFVKGTWHNSRFDISVTDGSSSWICNATEEEVAERAAQWDQP 63
Query: 348 VSDYVDLAEKYLGFQQPGSVYGFSEAGNGCKRLSWTFEKEGTKLEWRWKCQPSPDSKKTT 169
VS+Y+ LAE+YLGFQQP SVY FS+A G KRLSWTFEKEGTKLEWRWKC+PS DSKK T
Sbjct: 64 VSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLEWRWKCKPSDDSKKIT 123
Query: 168 AEVLDFLMDANIRLSEEVVWKTQSFDRVKQEAEKCLAQSEKLNSEKSVFESEIYGK 1
+LDFLM+ANIRLSEEVV KT+SF++++ EAE+CLAQ EKL EK+ FES Y K
Sbjct: 124 VGILDFLMEANIRLSEEVVNKTRSFEKMRSEAERCLAQGEKLCDEKTEFESATYAK 179