BLASTX nr result
ID: Rehmannia25_contig00027676
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00027676
(724 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004246060.1| PREDICTED: cytoplasmic tRNA 2-thiolation pro... 44 8e-07
ref|XP_004142985.1| PREDICTED: cytoplasmic tRNA 2-thiolation pro... 44 1e-06
gb|EXB57867.1| hypothetical protein L484_001064 [Morus notabilis] 44 1e-06
ref|NP_001189746.1| ROL5, repressor of LRX1 [Arabidopsis thalian... 43 3e-06
ref|NP_181956.2| ROL5, repressor of LRX1 [Arabidopsis thaliana] ... 43 3e-06
ref|XP_002881955.1| hypothetical protein ARALYDRAFT_483552 [Arab... 43 3e-06
ref|XP_006390227.1| hypothetical protein EUTSA_v10018770mg [Eutr... 43 5e-06
ref|XP_006294486.1| hypothetical protein CARUB_v10023513mg [Caps... 43 5e-06
ref|NP_001242776.1| uncharacterized protein LOC100816096 [Glycin... 42 5e-06
gb|ESW09318.1| hypothetical protein PHAVU_009G117600g [Phaseolus... 42 5e-06
ref|XP_002307125.2| hypothetical protein POPTR_0005s08520g [Popu... 44 6e-06
ref|XP_006355236.1| PREDICTED: cytoplasmic tRNA 2-thiolation pro... 43 6e-06
ref|XP_006301165.1| hypothetical protein CARUB_v10021562mg, part... 44 8e-06
>ref|XP_004246060.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Solanum
lycopersicum]
Length = 352
Score = 43.9 bits (102), Expect(2) = 8e-07
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRIST PEQG C RCGYI
Sbjct: 267 DIIKSGEDFRISTSTKMPEQGTCERCGYI 295
Score = 35.8 bits (81), Expect(2) = 8e-07
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 407 FAKLCY*DFKIAGIYSSNTYHGFVREFIKYLDIIR 511
F KL Y F IYS N Y GF REFIK+L+ +R
Sbjct: 229 FKKLDY--FSTECIYSPNAYRGFAREFIKHLERMR 261
>ref|XP_004142985.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Cucumis
sativus] gi|449529421|ref|XP_004171698.1| PREDICTED:
cytoplasmic tRNA 2-thiolation protein 1-like [Cucumis
sativus]
Length = 359
Score = 43.9 bits (102), Expect(2) = 1e-06
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRIST PEQG C RCGYI
Sbjct: 272 DIIKSGEDFRISTSTKMPEQGTCERCGYI 300
Score = 35.0 bits (79), Expect(2) = 1e-06
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +2
Query: 407 FAKLCY*DFKIAGIYSSNTYHGFVREFIKYLDIIR 511
F KL Y F IYS N Y GF REFIK L+ IR
Sbjct: 234 FKKLDY--FSTECIYSPNAYRGFAREFIKDLERIR 266
>gb|EXB57867.1| hypothetical protein L484_001064 [Morus notabilis]
Length = 321
Score = 43.9 bits (102), Expect(2) = 1e-06
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRIST PEQG C RCGYI
Sbjct: 237 DIIKSGEDFRISTSTKMPEQGTCERCGYI 265
Score = 35.0 bits (79), Expect(2) = 1e-06
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2
Query: 443 GIYSSNTYHGFVREFIKYLDIIR 511
GIYS N Y GF REFIK L+ IR
Sbjct: 209 GIYSPNAYRGFAREFIKDLERIR 231
>ref|NP_001189746.1| ROL5, repressor of LRX1 [Arabidopsis thaliana]
gi|330255306|gb|AEC10400.1| ROL5, repressor of LRX1
[Arabidopsis thaliana]
Length = 358
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRI+T PEQG C RCGYI
Sbjct: 272 DIIKSGEDFRIATTTKMPEQGTCERCGYI 300
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +2
Query: 407 FAKLCY*DFKIAGIYSSNTYHGFVREFIKYLDIIR 511
F KL Y F IYS N Y GF REFIK L+ IR
Sbjct: 234 FKKLDY--FSTECIYSPNAYRGFAREFIKDLERIR 266
>ref|NP_181956.2| ROL5, repressor of LRX1 [Arabidopsis thaliana]
gi|226711456|sp|O64862.2|CTU1_ARATH RecName:
Full=Cytoplasmic tRNA 2-thiolation protein 1; AltName:
Full=Cytoplasmic tRNA adenylyltransferase 1
gi|26449617|dbj|BAC41934.1| unknown protein [Arabidopsis
thaliana] gi|30725380|gb|AAP37712.1| At2g44270
[Arabidopsis thaliana] gi|330255305|gb|AEC10399.1| ROL5,
repressor of LRX1 [Arabidopsis thaliana]
Length = 355
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRI+T PEQG C RCGYI
Sbjct: 269 DIIKSGEDFRIATTTKMPEQGTCERCGYI 297
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +2
Query: 407 FAKLCY*DFKIAGIYSSNTYHGFVREFIKYLDIIR 511
F KL Y F IYS N Y GF REFIK L+ IR
Sbjct: 231 FKKLDY--FSTECIYSPNAYRGFAREFIKDLERIR 263
>ref|XP_002881955.1| hypothetical protein ARALYDRAFT_483552 [Arabidopsis lyrata subsp.
lyrata] gi|297327794|gb|EFH58214.1| hypothetical protein
ARALYDRAFT_483552 [Arabidopsis lyrata subsp. lyrata]
Length = 355
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRI+T PEQG C RCGYI
Sbjct: 269 DIIKSGEDFRIATTTKMPEQGTCERCGYI 297
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +2
Query: 407 FAKLCY*DFKIAGIYSSNTYHGFVREFIKYLDIIR 511
F KL Y F IYS N Y GF REFIK L+ IR
Sbjct: 231 FKKLDY--FSTECIYSPNAYRGFAREFIKDLERIR 263
>ref|XP_006390227.1| hypothetical protein EUTSA_v10018770mg [Eutrema salsugineum]
gi|557086661|gb|ESQ27513.1| hypothetical protein
EUTSA_v10018770mg [Eutrema salsugineum]
Length = 356
Score = 42.7 bits (99), Expect(2) = 5e-06
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRI+T PEQG C RCGYI
Sbjct: 272 DIIKSGEDFRIATTTKMPEQGTCERCGYI 300
Score = 34.3 bits (77), Expect(2) = 5e-06
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2
Query: 407 FAKLCY*DFKIAGIYSSNTYHGFVREFIKYLDIIR 511
F KL Y F IYS N Y GF REFIK L+ +R
Sbjct: 234 FKKLDY--FSTECIYSPNAYRGFAREFIKDLERLR 266
>ref|XP_006294486.1| hypothetical protein CARUB_v10023513mg [Capsella rubella]
gi|482563194|gb|EOA27384.1| hypothetical protein
CARUB_v10023513mg [Capsella rubella]
Length = 355
Score = 42.7 bits (99), Expect(2) = 5e-06
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRI+T PEQG C RCGYI
Sbjct: 269 DIIKSGEDFRIATTTKMPEQGTCERCGYI 297
Score = 34.3 bits (77), Expect(2) = 5e-06
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2
Query: 407 FAKLCY*DFKIAGIYSSNTYHGFVREFIKYLDIIR 511
F KL Y F IYS N Y GF REFIK L+ +R
Sbjct: 231 FKKLDY--FSTECIYSPNAYRGFAREFIKDLERLR 263
>ref|NP_001242776.1| uncharacterized protein LOC100816096 [Glycine max]
gi|255635229|gb|ACU17969.1| unknown [Glycine max]
Length = 353
Score = 42.0 bits (97), Expect(2) = 5e-06
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK E+FRIST PEQG C RCGYI
Sbjct: 270 DIIKSGENFRISTSTKMPEQGTCERCGYI 298
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 20/35 (57%), Positives = 21/35 (60%)
Frame = +2
Query: 407 FAKLCY*DFKIAGIYSSNTYHGFVREFIKYLDIIR 511
F KL Y F IYS N Y GF REFIK L+ IR
Sbjct: 232 FKKLDY--FSTECIYSPNAYRGFAREFIKDLERIR 264
>gb|ESW09318.1| hypothetical protein PHAVU_009G117600g [Phaseolus vulgaris]
Length = 322
Score = 42.0 bits (97), Expect(2) = 5e-06
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK E+FRIST PEQG C RCGYI
Sbjct: 239 DIIKSGENFRISTTTKMPEQGTCQRCGYI 267
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2
Query: 443 GIYSSNTYHGFVREFIKYLDIIR 511
GIYS N Y GF REFIK L+ IR
Sbjct: 211 GIYSPNAYRGFAREFIKDLERIR 233
>ref|XP_002307125.2| hypothetical protein POPTR_0005s08520g [Populus trichocarpa]
gi|566170211|ref|XP_006382926.1| hypothetical protein
POPTR_0005s08520g [Populus trichocarpa]
gi|550338408|gb|EEE94121.2| hypothetical protein
POPTR_0005s08520g [Populus trichocarpa]
gi|550338409|gb|ERP60723.1| hypothetical protein
POPTR_0005s08520g [Populus trichocarpa]
Length = 353
Score = 43.9 bits (102), Expect(2) = 6e-06
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRIST PEQG C RCGYI
Sbjct: 268 DIIKSGEDFRISTSTKMPEQGTCERCGYI 296
Score = 32.7 bits (73), Expect(2) = 6e-06
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2
Query: 407 FAKLCY*DFKIAGIYSSNTYHGFVREFIKYLDIIR 511
F +L Y F IYS N Y GF REFIK L+ +R
Sbjct: 230 FKRLDY--FSTECIYSPNAYRGFAREFIKDLERMR 262
>ref|XP_006355236.1| PREDICTED: cytoplasmic tRNA 2-thiolation protein 1-like [Solanum
tuberosum]
Length = 352
Score = 42.7 bits (99), Expect(2) = 6e-06
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRIST PEQG C RCGYI
Sbjct: 267 DIIKSGEDFRISTSTKMPEQGICERCGYI 295
Score = 33.9 bits (76), Expect(2) = 6e-06
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +2
Query: 407 FAKLCY*DFKIAGIYSSNTYHGFVREFIKYLDIIR 511
F KL Y F IYS N Y GF REFIK L+ +R
Sbjct: 229 FKKLDY--FSTECIYSPNAYRGFAREFIKDLERMR 261
>ref|XP_006301165.1| hypothetical protein CARUB_v10021562mg, partial [Capsella rubella]
gi|482569875|gb|EOA34063.1| hypothetical protein
CARUB_v10021562mg, partial [Capsella rubella]
Length = 392
Score = 43.9 bits (102), Expect(2) = 8e-06
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +3
Query: 630 NIIKFVEDFRISTCKNTPEQGNCGRCGYI 716
+IIK EDFRIST PEQG C RCGYI
Sbjct: 307 DIIKSGEDFRISTTTKMPEQGTCERCGYI 335
Score = 32.3 bits (72), Expect(2) = 8e-06
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +2
Query: 431 FKIAGIYSSNTYHGFVREFIKYLDIIR 511
F IYS N Y GF REFIK L+ +R
Sbjct: 275 FSTECIYSPNAYRGFAREFIKDLERLR 301