BLASTX nr result
ID: Rehmannia25_contig00027047
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00027047
(513 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABG22014.1| retrotransposon protein, putative, unclassified [... 71 1e-10
ref|NP_001053783.1| Os04g0603800 [Oryza sativa Japonica Group] g... 71 2e-10
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 71 2e-10
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] 71 2e-10
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 71 2e-10
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 70 2e-10
emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group] 70 4e-10
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 68 1e-09
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 68 1e-09
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera] 67 3e-09
ref|XP_004295307.1| PREDICTED: uncharacterized protein LOC101309... 66 5e-09
emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera] 66 5e-09
gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 65 7e-09
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 65 7e-09
gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e... 65 9e-09
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera] 65 9e-09
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] 65 9e-09
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 62 1e-08
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 65 1e-08
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 65 1e-08
>gb|ABG22014.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1422
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/84 (44%), Positives = 45/84 (53%)
Frame = +2
Query: 158 RLKDRLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYD 337
R+ +L LP E+ IHPVFHVS LKK + EG K EP ++ RR
Sbjct: 1336 RVAYKLQLPAEALIHPVFHVSQLKKHLGSHAVPMANLPAAGPEGQIKTEPVAIMRRRMIP 1395
Query: 338 RNGIKVSQILVEWVNSSPEKATWK 409
R G+ V+Q LV W N SP ATWK
Sbjct: 1396 RRGVAVTQWLVFWKNLSPADATWK 1419
>ref|NP_001053783.1| Os04g0603800 [Oryza sativa Japonica Group]
gi|113565354|dbj|BAF15697.1| Os04g0603800, partial
[Oryza sativa Japonica Group]
Length = 123
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/79 (46%), Positives = 43/79 (54%)
Frame = +2
Query: 173 LDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGIK 352
L LP E+ IHPVFHVS LKK + D++G K EP VL RR R
Sbjct: 31 LQLPEEAGIHPVFHVSQLKKHVGNLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEP 90
Query: 353 VSQILVEWVNSSPEKATWK 409
V+Q LV W N SPE ATW+
Sbjct: 91 VTQWLVHWENLSPEDATWE 109
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/84 (41%), Positives = 47/84 (55%)
Frame = +2
Query: 158 RLKDRLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYD 337
+L +L LP +++IHPVFHVS LKK + +G K EP VL RR
Sbjct: 1378 QLAYKLQLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVP 1437
Query: 338 RNGIKVSQILVEWVNSSPEKATWK 409
R G+ V+Q L+ W N SP +ATW+
Sbjct: 1438 RKGVAVTQWLILWQNLSPAEATWE 1461
>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/79 (46%), Positives = 43/79 (54%)
Frame = +2
Query: 173 LDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGIK 352
L LP E+ IHPVFHVS LKK + D++G K EP VL RR R
Sbjct: 1281 LQLPEEAGIHPVFHVSQLKKHVGNLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEP 1340
Query: 353 VSQILVEWVNSSPEKATWK 409
V+Q LV W N SPE ATW+
Sbjct: 1341 VTQWLVHWENLSPEDATWE 1359
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 70.9 bits (172), Expect = 2e-10
Identities = 38/84 (45%), Positives = 45/84 (53%)
Frame = +2
Query: 158 RLKDRLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYD 337
R+ +L LP S IHPVFHVS LKK I +G K EP VL RR
Sbjct: 1489 RVAYKLQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIP 1548
Query: 338 RNGIKVSQILVEWVNSSPEKATWK 409
R G+ V+Q LV W N SP +ATW+
Sbjct: 1549 RGGVAVTQWLVLWHNLSPSEATWE 1572
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/80 (43%), Positives = 44/80 (55%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
RL LP E+ IHPVFHVS LKK + +G K EP VL RR RN +
Sbjct: 862 RLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNV 921
Query: 350 KVSQILVEWVNSSPEKATWK 409
V+Q L+ W N +P +ATW+
Sbjct: 922 AVTQWLILWSNLTPAEATWE 941
>emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]
Length = 394
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/80 (43%), Positives = 43/80 (53%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
RL LP ++ IHPVFHVS LKK + EG K +P VL RR RNG+
Sbjct: 301 RLQLPNDATIHPVFHVSQLKKHLGKRAIPMPNLPSVGPEGQIKTQPTAVLQRRMMPRNGV 360
Query: 350 KVSQILVEWVNSSPEKATWK 409
V+Q L+ W N P ATW+
Sbjct: 361 AVTQWLILWENLGPTDATWE 380
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
+L LP ++ IHPVFHVS LKK + +G K +P VL RR RNG+
Sbjct: 1420 KLQLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGV 1479
Query: 350 KVSQILVEWVNSSPEKATWK 409
V+Q L+ W N P ATW+
Sbjct: 1480 AVTQWLILWENLGPADATWE 1499
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/80 (41%), Positives = 43/80 (53%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
+L LP ++ IHPVFHVS LKK + +G K +P VL RR RNG+
Sbjct: 1318 KLQLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGV 1377
Query: 350 KVSQILVEWVNSSPEKATWK 409
V+Q L+ W N P ATW+
Sbjct: 1378 AVTQWLILWENLGPADATWE 1397
>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
Length = 647
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/80 (42%), Positives = 44/80 (55%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
+L LP SRIHPVFHVSLLKK I D+G F +EP ++D R + + G
Sbjct: 525 QLQLPAGSRIHPVFHVSLLKKTIGDSNACCPTLPPLTDDGAFIIEPTEIIDTRWFKKGGN 584
Query: 350 KVSQILVEWVNSSPEKATWK 409
+ LV+W N E ATW+
Sbjct: 585 FFEECLVKWKNLLVEDATWE 604
>ref|XP_004295307.1| PREDICTED: uncharacterized protein LOC101309522 [Fragaria vesca
subsp. vesca]
Length = 249
Score = 65.9 bits (159), Expect = 5e-09
Identities = 35/80 (43%), Positives = 44/80 (55%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
RL LPP S+IHPVFHVSLLKKRI D G +P RVLD +
Sbjct: 145 RLKLPPNSKIHPVFHVSLLKKRIGEGLPVSTTLPQFDSSGDIIWQPLRVLDMGVRTKKKQ 204
Query: 350 KVSQILVEWVNSSPEKATWK 409
+++ LV+W + S E ATW+
Sbjct: 205 RITTWLVQWKSMSEEDATWE 224
>emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera]
Length = 1852
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/80 (42%), Positives = 44/80 (55%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
RL LPPE +IHPVFHVSLLKK + DEG +V P +V++ R R
Sbjct: 1104 RLSLPPEVKIHPVFHVSLLKKYVGTSLPALVDLAPISDEGQLQVTPEKVVNTRWIKRGTK 1163
Query: 350 KVSQILVEWVNSSPEKATWK 409
+ + LV+W N E ATW+
Sbjct: 1164 FIEESLVQWKNLPVEDATWE 1183
>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/80 (42%), Positives = 41/80 (51%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
+L LP E+ IHPVFHVS LKK + +G K EP VL RR R
Sbjct: 1067 KLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVLARRVIPRQNE 1126
Query: 350 KVSQILVEWVNSSPEKATWK 409
V Q L+ W N +PE ATW+
Sbjct: 1127 PVVQWLIHWENLTPEDATWE 1146
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/80 (42%), Positives = 41/80 (51%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
+L LP E+ IHPVFHVS LKK + +G K EP VL RR R
Sbjct: 1153 KLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVLARRVIPRQNE 1212
Query: 350 KVSQILVEWVNSSPEKATWK 409
V Q L+ W N +PE ATW+
Sbjct: 1213 PVVQWLIHWENLTPEDATWE 1232
>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 335
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/78 (42%), Positives = 42/78 (53%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
RL LP + IHPVFHV+ LKK + + G K EP VLDRR R
Sbjct: 258 RLQLPEHTLIHPVFHVNQLKKHLGSHAVPLTGLPLVGENGKIKTEPVVVLDRRIVPRRNE 317
Query: 350 KVSQILVEWVNSSPEKAT 403
V+Q+L++W+N PE AT
Sbjct: 318 PVAQLLIQWLNLGPEDAT 335
>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
Length = 2822
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
RL+LPPE +IHPVFHVS LK+++ D++G + EP +L RR +
Sbjct: 1134 RLELPPEEKIHPVFHVSCLKEKLGERHQLVVTLPPADNDGVIRPEPEEILHRRLKKKKNH 1193
Query: 350 KVSQILVEWVNSSPEKATW 406
V+++LV+W ++A+W
Sbjct: 1194 AVTEVLVKWKGLGEDEASW 1212
>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
Length = 1434
Score = 65.1 bits (157), Expect = 9e-09
Identities = 35/77 (45%), Positives = 41/77 (53%)
Frame = +2
Query: 173 LDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGIK 352
L LP E+ IHPVFHVS LKK + D++G K EP VL RR R
Sbjct: 1358 LQLPEEAGIHPVFHVSQLKKHVGNLAVPLPNLPLVDEDGNIKAEPVAVLARRVVPRRNEP 1417
Query: 353 VSQILVEWVNSSPEKAT 403
V+Q LV W N +PE AT
Sbjct: 1418 VTQWLVHWENLTPEDAT 1434
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 61.6 bits (148), Expect(2) = 1e-08
Identities = 34/80 (42%), Positives = 41/80 (51%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
+L LP S+IHPVFHVS LKK I TDD G +P VL+RR +N
Sbjct: 1218 KLLLPASSQIHPVFHVSQLKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNA 1277
Query: 350 KVSQILVEWVNSSPEKATWK 409
V Q V+W N ATW+
Sbjct: 1278 PVVQWKVQWANLPLSAATWE 1297
Score = 23.1 bits (48), Expect(2) = 1e-08
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 411 DVKFIHKKFPAFDP 452
D FI K FPAF+P
Sbjct: 1298 DAAFISKVFPAFNP 1311
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
RL+LPPE++IHPVFHVS LK+++ D +G + EP +L RR +
Sbjct: 1373 RLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLPPXDKDGVIRXEPEEILHRRLKKKKNH 1432
Query: 350 KVSQILVEWVNSSPEKATW 406
V+++LV+W ++A+W
Sbjct: 1433 AVTEVLVKWKGLGEDEASW 1451
>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/104 (35%), Positives = 52/104 (50%)
Frame = +2
Query: 170 RLDLPPESRIHPVFHVSLLKKRIXXXXXXXXXXXXTDDEGYFKVEPFRVLDRREYDRNGI 349
+L LP SR+H VFHVSLLKK + +D+G +EP VL RR G
Sbjct: 1163 KLKLPEGSRVHSVFHVSLLKKAVGNYHEEENLPDLEEDKGVV-IEPETVLTRRTIQVQGE 1221
Query: 350 KVSQILVEWVNSSPEKATWKRC*VYSQEISGF*SLRTRISFTGG 481
K+ Q+LV W+ E+ATW+ + + F L + +GG
Sbjct: 1222 KIDQVLVHWMGQKVEEATWEDTLIIRSQFPNF-YLEDKAMLSGG 1264