BLASTX nr result
ID: Rehmannia25_contig00026940
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00026940
(848 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 420 e-115
emb|CBI18448.3| unnamed protein product [Vitis vinifera] 420 e-115
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ... 415 e-113
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit... 411 e-112
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr... 410 e-112
ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citr... 410 e-112
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit... 409 e-112
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [... 407 e-111
gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe... 405 e-110
ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 404 e-110
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis] 404 e-110
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis] 402 e-109
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 399 e-109
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr... 397 e-108
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana] 396 e-108
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian... 396 e-108
ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mit... 393 e-107
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit... 393 e-107
gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus... 392 e-107
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu... 391 e-106
>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
vinifera]
Length = 479
Score = 420 bits (1079), Expect = e-115
Identities = 202/247 (81%), Positives = 219/247 (88%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGLLLMGRTKES++HLHWLFSD+ KAK SK W+DACE QRYWALVIGSPKQKEG
Sbjct: 233 RESSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEG 292
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APL+KVLLDDG+TERVILAN SGLEASQEAITEYRVLGP INGCSWIEL P TSRKH
Sbjct: 293 VIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKH 352
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPTTG+PYK+RRPEGLDVQKGSVL
Sbjct: 353 QLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVL 412
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE++LPN+AKF+ + N + P+ KPDILRFVA MP+HMKISWN
Sbjct: 413 SKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWN 472
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 473 LMSSYLV 479
>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 420 bits (1079), Expect = e-115
Identities = 202/247 (81%), Positives = 219/247 (88%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGLLLMGRTKES++HLHWLFSD+ KAK SK W+DACE QRYWALVIGSPKQKEG
Sbjct: 235 RESSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEG 294
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APL+KVLLDDG+TERVILAN SGLEASQEAITEYRVLGP INGCSWIEL P TSRKH
Sbjct: 295 VIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKH 354
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPTTG+PYK+RRPEGLDVQKGSVL
Sbjct: 355 QLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGKPYKMRRPEGLDVQKGSVL 414
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE++LPN+AKF+ + N + P+ KPDILRFVA MP+HMKISWN
Sbjct: 415 SKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKPDILRFVASMPNHMKISWN 474
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 475 LMSSYLV 481
>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 471
Score = 415 bits (1066), Expect = e-113
Identities = 197/247 (79%), Positives = 216/247 (87%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGLLLMGRTKES++HLHWLF+D+ K K WNDAC+ YQR+WALVIG+PK+KEG
Sbjct: 227 RESSGLLLMGRTKESVAHLHWLFNDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEG 286
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
LICAPL+K+LLDDG+TERVILA N GLEASQEAITEYRVLGP INGCSWIELRP TSRKH
Sbjct: 287 LICAPLSKILLDDGKTERVILAQNVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKH 346
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPTTG+PYKLRRPEGLDVQKGSVL
Sbjct: 347 QLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVL 406
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE+VLPN+AKF+ + + + P KPD+LRFVA MP HMKISWN
Sbjct: 407 SKVPLLHLHCRELVLPNIAKFLPVLNK--NTETLPPALSMKPDLLRFVATMPKHMKISWN 464
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 465 LMSSYLV 471
>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
sinensis]
Length = 471
Score = 411 bits (1057), Expect = e-112
Identities = 201/250 (80%), Positives = 220/250 (88%), Gaps = 3/250 (1%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGLLLMGRTKES+S L WLFSDV K+K SK WNDACE MYQRYWALVIGSP++K+G
Sbjct: 224 RESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPREKQG 283
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APL+KVLLDDG+TER+ILA NSGLEASQEA+TEYRVLGP INGCSWIELRP T RKH
Sbjct: 284 IIRAPLSKVLLDDGKTERIILAQNSGLEASQEAMTEYRVLGPMINGCSWIELRPLTCRKH 343
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPT+G+PYKLRRP+GLDVQKGSVL
Sbjct: 344 QLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVL 403
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSK---PDILRFVAPMPSHMKI 713
SKVPLLHLHCRE+VLPN+AKFI + + N + P SK PD+LRFVA MPSHMKI
Sbjct: 404 SKVPLLHLHCRELVLPNIAKFINVLNQKSDN--LFPTLSSKPDGPDLLRFVASMPSHMKI 461
Query: 714 SWNLMSSYLV 743
SWNLMSSYLV
Sbjct: 462 SWNLMSSYLV 471
>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
gi|557538602|gb|ESR49646.1| hypothetical protein
CICLE_v10031422mg [Citrus clementina]
Length = 471
Score = 410 bits (1055), Expect = e-112
Identities = 201/250 (80%), Positives = 219/250 (87%), Gaps = 3/250 (1%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGLLLMGRTKES+S L WLFSDV K+K SK WNDACE MYQRYWALVIGSPK+K+G
Sbjct: 224 RESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPKEKQG 283
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APL+KVLLDDG+TER+ILA NSGLEASQEA+TEYRVLGP INGCSWIELRP T RKH
Sbjct: 284 IIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVTEYRVLGPMINGCSWIELRPLTCRKH 343
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPT+G+PYKLRRP+GLDVQKGSVL
Sbjct: 344 QLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVL 403
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSK---PDILRFVAPMPSHMKI 713
SKVPLLHLHCRE+VLPN+AKF + + N + P SK PD+LRFVA MPSHMKI
Sbjct: 404 SKVPLLHLHCRELVLPNIAKFRNVLNQKSDN--LFPTLSSKPDGPDLLRFVASMPSHMKI 461
Query: 714 SWNLMSSYLV 743
SWNLMSSYLV
Sbjct: 462 SWNLMSSYLV 471
>ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
gi|557538601|gb|ESR49645.1| hypothetical protein
CICLE_v10031422mg [Citrus clementina]
Length = 343
Score = 410 bits (1055), Expect = e-112
Identities = 201/250 (80%), Positives = 219/250 (87%), Gaps = 3/250 (1%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGLLLMGRTKES+S L WLFSDV K+K SK WNDACE MYQRYWALVIGSPK+K+G
Sbjct: 96 RESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPKEKQG 155
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APL+KVLLDDG+TER+ILA NSGLEASQEA+TEYRVLGP INGCSWIELRP T RKH
Sbjct: 156 IIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVTEYRVLGPMINGCSWIELRPLTCRKH 215
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EPT+G+PYKLRRP+GLDVQKGSVL
Sbjct: 216 QLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGKPYKLRRPDGLDVQKGSVL 275
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSK---PDILRFVAPMPSHMKI 713
SKVPLLHLHCRE+VLPN+AKF + + N + P SK PD+LRFVA MPSHMKI
Sbjct: 276 SKVPLLHLHCRELVLPNIAKFRNVLNQKSDN--LFPTLSSKPDGPDLLRFVASMPSHMKI 333
Query: 714 SWNLMSSYLV 743
SWNLMSSYLV
Sbjct: 334 SWNLMSSYLV 343
>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
PREDICTED: RNA pseudouridine synthase 3,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
pseudouridine synthase 3, mitochondrial-like isoform X3
[Solanum tuberosum]
Length = 475
Score = 409 bits (1050), Expect = e-112
Identities = 195/247 (78%), Positives = 217/247 (87%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGL LMGRT+ESISHLH LFS+ +K+K SK WNDAC YQRYWALVIGSPK+KEG
Sbjct: 232 RESSGLHLMGRTEESISHLHLLFSNTKKSKSLSKAWNDACGSTYQRYWALVIGSPKEKEG 291
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APLTKVLLDDG TERV+LA SGLEAS EA+TEYR+LGP INGCSWIELRP+TSRKH
Sbjct: 292 VISAPLTKVLLDDGRTERVMLAQQSGLEASDEAVTEYRLLGPMINGCSWIELRPHTSRKH 351
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
Q+RVHCAEALGTPIVGDYKYGWFVH +WKQMPRVD EPTTG+PY+L+RPEGLDVQKGSVL
Sbjct: 352 QIRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVDVEPTTGKPYRLKRPEGLDVQKGSVL 411
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE+VLPN+AKFIELH R + ++ SKPD+LRFVAPMPS MKISW
Sbjct: 412 SKVPLLHLHCRELVLPNIAKFIELHSRKTKKH---SDYSSKPDLLRFVAPMPSPMKISWK 468
Query: 723 LMSSYLV 743
LMSS L+
Sbjct: 469 LMSSCLI 475
>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 468
Score = 407 bits (1046), Expect = e-111
Identities = 197/247 (79%), Positives = 214/247 (86%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGLLLMGRTKESI HL WLFSDV K+ K WNDAC+ YQRYWALVIGSPK+KEG
Sbjct: 224 RESSGLLLMGRTKESIDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEG 283
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
LI APL+KVLL+DG+TERV+LA +SGLEASQEA+TEYRVLGP INGCSWIELRP TSRKH
Sbjct: 284 LIRAPLSKVLLNDGKTERVVLAQHSGLEASQEALTEYRVLGPRINGCSWIELRPLTSRKH 343
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGW VH RWKQMPRVD EP +G+PYKLRRP GLDVQKGSVL
Sbjct: 344 QLRVHCAEALGTPIVGDYKYGWCVHQRWKQMPRVDIEPFSGKPYKLRRPAGLDVQKGSVL 403
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE VLPN+AKF+ + N H P D+KPD+LRFVA MP+HMKISWN
Sbjct: 404 SKVPLLHLHCREFVLPNIAKFLAVLNEKSENIH--PALDAKPDLLRFVASMPTHMKISWN 461
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 462 LMSSYLV 468
>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
Length = 471
Score = 405 bits (1040), Expect = e-110
Identities = 196/247 (79%), Positives = 215/247 (87%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGL LMGRTKES+S L WL++D K K + W+DACE YQRYWALVIGSPK+KEG
Sbjct: 227 RESSGLHLMGRTKESVSLLQWLYTDFNKGKSSCQAWDDACEARYQRYWALVIGSPKEKEG 286
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
LICAPL+KVLLD+G+TERVILA+ SGLEASQ+AIT+YRVLGPTINGCSWIELRP TSRKH
Sbjct: 287 LICAPLSKVLLDNGKTERVILAHQSGLEASQKAITQYRVLGPTINGCSWIELRPLTSRKH 346
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMP VD EPT+G PYKLRRP GLDVQKGSVL
Sbjct: 347 QLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPHVDVEPTSGLPYKLRRPAGLDVQKGSVL 406
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE+VLPN+AKF+ + + + H P SKPDILRFVA MPSHMKISWN
Sbjct: 407 SKVPLLHLHCRELVLPNIAKFLLILDQKLDSLH--PAVSSKPDILRFVASMPSHMKISWN 464
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 465 LMSSYLV 471
>ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Solanum
lycopersicum]
Length = 475
Score = 404 bits (1039), Expect = e-110
Identities = 194/247 (78%), Positives = 215/247 (87%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGL LMGRT+ESISHLH LFS+ +++K SK WNDAC YQRYWALVIGSPK KEG
Sbjct: 232 RESSGLHLMGRTEESISHLHLLFSNTKRSKSLSKAWNDACGSTYQRYWALVIGSPKVKEG 291
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APLTKVLLDDG TERV+LA SGLEAS EA+TEYR+LGP INGCSWIELRP+TSRKH
Sbjct: 292 VISAPLTKVLLDDGRTERVMLAQQSGLEASDEAVTEYRLLGPMINGCSWIELRPHTSRKH 351
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH +WKQMPRVD EP TG+PY+L+RPEGLDVQKGSVL
Sbjct: 352 QLRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVDVEPITGKPYRLKRPEGLDVQKGSVL 411
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE+VLPN+AKFIELH R + ++ SKPD+LRFVAPMPS MKISW
Sbjct: 412 SKVPLLHLHCRELVLPNIAKFIELHSR---KTRKNTDYSSKPDLLRFVAPMPSPMKISWK 468
Query: 723 LMSSYLV 743
LMSS L+
Sbjct: 469 LMSSCLI 475
>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
Length = 449
Score = 404 bits (1038), Expect = e-110
Identities = 194/247 (78%), Positives = 217/247 (87%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
R+SSGLLLMGRTKESISHL WLFS++ K WNDACE YQ+YWALVIGSPK+KEG
Sbjct: 212 RDSSGLLLMGRTKESISHLEWLFSNI-------KAWNDACEAKYQKYWALVIGSPKEKEG 264
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+ICAPL+KVLL+DG+TERVILA+ +G +ASQEAITEYRVLGP INGCSW+ELRP TSRKH
Sbjct: 265 IICAPLSKVLLNDGKTERVILAHQTGFQASQEAITEYRVLGPMINGCSWLELRPLTSRKH 324
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMP+V+ EPTTG+PYKLRRPEGLDVQKGSV+
Sbjct: 325 QLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVNIEPTTGKPYKLRRPEGLDVQKGSVM 384
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHL CRE+VLPN+AKF+ + R N DP +SKPD+LRFVA MPSHMKISWN
Sbjct: 385 SKVPLLHLQCRELVLPNIAKFLRVFDRKSQNQ--DPALESKPDLLRFVARMPSHMKISWN 442
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 443 LMSSYLV 449
>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
Length = 449
Score = 402 bits (1032), Expect = e-109
Identities = 193/247 (78%), Positives = 216/247 (87%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
R+SSGLLLMGRTKESISHL WLFS++ K WNDACE YQ+YWALVIGSPK+KEG
Sbjct: 212 RDSSGLLLMGRTKESISHLEWLFSNI-------KAWNDACEAKYQKYWALVIGSPKEKEG 264
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+ICAPL+KVLL+DG+TERVILA+ +G +ASQEAITEYRVLGP INGCSW+ELRP TSRKH
Sbjct: 265 IICAPLSKVLLNDGKTERVILAHQTGFQASQEAITEYRVLGPMINGCSWLELRPLTSRKH 324
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGW VH RWKQMP+V+ EPTTG+PYKLRRPEGLDVQKGSV+
Sbjct: 325 QLRVHCAEALGTPIVGDYKYGWLVHKRWKQMPQVNIEPTTGKPYKLRRPEGLDVQKGSVM 384
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHL CRE+VLPN+AKF+ + R N DP +SKPD+LRFVA MPSHMKISWN
Sbjct: 385 SKVPLLHLQCRELVLPNIAKFLRVFDRKSENQ--DPALESKPDLLRFVARMPSHMKISWN 442
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 443 LMSSYLV 449
>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
X1 [Cicer arietinum]
Length = 479
Score = 399 bits (1025), Expect = e-109
Identities = 185/247 (74%), Positives = 215/247 (87%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSG+LL+GRTK+S+SHL WLFS++ K K WNDACE YQRYWALVIG+PK+KEG
Sbjct: 235 RESSGILLLGRTKDSVSHLQWLFSNINNTKSSCKAWNDACESTYQRYWALVIGTPKEKEG 294
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APL+KVLL+DG+TERVILA+ S +E QEA+TEYRVLGP INGCSW+ELRP T RKH
Sbjct: 295 IIHAPLSKVLLNDGKTERVILAHESSIEPHQEAVTEYRVLGPKINGCSWVELRPLTYRKH 354
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH+RWKQMPRVD EPTTG+PYKLRRPEGLDVQKGSVL
Sbjct: 355 QLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVL 414
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE+ LPN+AKF+ + ++ + +DP +PD+LRFVA MP+HM+ISWN
Sbjct: 415 SKVPLLHLHCRELALPNIAKFLNVLEK--SSQQLDPSLSLQPDVLRFVATMPNHMRISWN 472
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 473 LMSSYLV 479
>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
gi|557086377|gb|ESQ27229.1| hypothetical protein
EUTSA_v10018480mg [Eutrema salsugineum]
Length = 478
Score = 397 bits (1019), Expect = e-108
Identities = 190/250 (76%), Positives = 213/250 (85%), Gaps = 3/250 (1%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RE+SGLL+MGRTKESI HLH +FSD + K WN ACE MYQ+YWALVIGSPK KEG
Sbjct: 233 RETSGLLVMGRTKESIDHLHSVFSDFKGRDSRCKAWNKACEAMYQQYWALVIGSPKDKEG 292
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I AP++KVLLDDG+T+RV+LA SG EASQEAITEYRVLGP INGCSW+ELRP TSRKH
Sbjct: 293 VISAPISKVLLDDGKTDRVVLARGSGFEASQEAITEYRVLGPMINGCSWLELRPLTSRKH 352
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH +WKQMP+VD EPT+G+PYKLRRPEGLD+QKGSVL
Sbjct: 353 QLRVHCAEALGTPIVGDYKYGWFVHKKWKQMPQVDIEPTSGKPYKLRRPEGLDIQKGSVL 412
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHD---SKPDILRFVAPMPSHMKI 713
SKVPLLHLHCREMVLPN+AKF+ + N +D H SKPD+LRFVA MPSHMKI
Sbjct: 413 SKVPLLHLHCREMVLPNIAKFLHV----LNNQEIDSLHPGIISKPDLLRFVASMPSHMKI 468
Query: 714 SWNLMSSYLV 743
SWN+MSSYLV
Sbjct: 469 SWNIMSSYLV 478
>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
Length = 326
Score = 396 bits (1018), Expect = e-108
Identities = 191/250 (76%), Positives = 212/250 (84%), Gaps = 3/250 (1%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RE+SGLL+MGRTKESI +LH +FSD + K WN ACE MYQ+YWALVIGSPK+KEG
Sbjct: 81 RETSGLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEG 140
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
LI APL+KVLLDDG+T+RV+LA SG EASQ+AITEY+VLGP INGCSW+ELRP TSRKH
Sbjct: 141 LISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKH 200
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMP+VD EPTTG+PYKLRRPEGLDVQKGSVL
Sbjct: 201 QLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVL 260
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHD---SKPDILRFVAPMPSHMKI 713
SKVPLLHLHCREMVLPN+AKF+ + +P H KPD+LRFVA MPSHMKI
Sbjct: 261 SKVPLLHLHCREMVLPNIAKFLHV----MNQQETEPLHTGIIDKPDLLRFVASMPSHMKI 316
Query: 714 SWNLMSSYLV 743
SWNLMSSYLV
Sbjct: 317 SWNLMSSYLV 326
>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
pseudouridine synthase 3, mitochondrial; AltName:
Full=RNA pseudouridylate synthase 3; AltName:
Full=RNA-uridine isomerase 3; Flags: Precursor
gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
thaliana] gi|56790228|gb|AAW30031.1| At1g78910
[Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
pseudourine synthase 3 [Arabidopsis thaliana]
Length = 478
Score = 396 bits (1018), Expect = e-108
Identities = 191/250 (76%), Positives = 212/250 (84%), Gaps = 3/250 (1%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RE+SGLL+MGRTKESI +LH +FSD + K WN ACE MYQ+YWALVIGSPK+KEG
Sbjct: 233 RETSGLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEG 292
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
LI APL+KVLLDDG+T+RV+LA SG EASQ+AITEY+VLGP INGCSW+ELRP TSRKH
Sbjct: 293 LISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKH 352
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMP+VD EPTTG+PYKLRRPEGLDVQKGSVL
Sbjct: 353 QLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVL 412
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHD---SKPDILRFVAPMPSHMKI 713
SKVPLLHLHCREMVLPN+AKF+ + +P H KPD+LRFVA MPSHMKI
Sbjct: 413 SKVPLLHLHCREMVLPNIAKFLHV----MNQQETEPLHTGIIDKPDLLRFVASMPSHMKI 468
Query: 714 SWNLMSSYLV 743
SWNLMSSYLV
Sbjct: 469 SWNLMSSYLV 478
>ref|XP_006601251.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X2 [Glycine max]
Length = 449
Score = 393 bits (1010), Expect = e-107
Identities = 184/247 (74%), Positives = 214/247 (86%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSG+LL+GRTK+S+SHL WLFS++ AK K+WN+ACE YQRYWALVIG+PK+KEG
Sbjct: 205 RESSGILLLGRTKDSVSHLQWLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEG 264
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APL+KVLL+DG+TER+ILA++S +E QEA+TEYRVLGP INGCSW+ELRP T RKH
Sbjct: 265 IIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKH 324
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH+RWKQMPRVD EPTTG+PYKLRRPEGLDVQKGSVL
Sbjct: 325 QLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVL 384
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE+VLPN+ KF +H + + +PD+LRFVA MPSHM+ISWN
Sbjct: 385 SKVPLLHLHCRELVLPNIVKF--MHVLNNSSEELRTSLREQPDVLRFVATMPSHMRISWN 442
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 443 LMSSYLV 449
>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X1 [Glycine max]
Length = 476
Score = 393 bits (1010), Expect = e-107
Identities = 184/247 (74%), Positives = 214/247 (86%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSG+LL+GRTK+S+SHL WLFS++ AK K+WN+ACE YQRYWALVIG+PK+KEG
Sbjct: 232 RESSGILLLGRTKDSVSHLQWLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEG 291
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APL+KVLL+DG+TER+ILA++S +E QEA+TEYRVLGP INGCSW+ELRP T RKH
Sbjct: 292 IIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKH 351
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH+RWKQMPRVD EPTTG+PYKLRRPEGLDVQKGSVL
Sbjct: 352 QLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRRPEGLDVQKGSVL 411
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE+VLPN+ KF +H + + +PD+LRFVA MPSHM+ISWN
Sbjct: 412 SKVPLLHLHCRELVLPNIVKF--MHVLNNSSEELRTSLREQPDVLRFVATMPSHMRISWN 469
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 470 LMSSYLV 476
>gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
Length = 480
Score = 392 bits (1007), Expect = e-107
Identities = 183/247 (74%), Positives = 214/247 (86%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RE+SG+LL+GRTK+S SHL WLF+++ AK K WNDACE YQRYWALVIG+PK+KEG
Sbjct: 236 RETSGILLLGRTKDSASHLQWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEG 295
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
+I APL+KVLL+DG+TER+ILAN+S +E QEA+TE+RVLGP INGCSW+ELRP T RKH
Sbjct: 296 IIHAPLSKVLLNDGKTERIILANHSSVEPRQEAVTEFRVLGPKINGCSWVELRPLTYRKH 355
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH+RWKQMPR+D EPTTG+PYKLRRPEGLDVQKGSVL
Sbjct: 356 QLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRIDIEPTTGKPYKLRRPEGLDVQKGSVL 415
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
SKVPLLHLHCRE+VLPN+AKF LH + + + +P++LRFVA MPSHM+ISWN
Sbjct: 416 SKVPLLHLHCRELVLPNIAKF--LHVLNNSSEELHSSLNQQPEVLRFVATMPSHMRISWN 473
Query: 723 LMSSYLV 743
LMSSYLV
Sbjct: 474 LMSSYLV 480
>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
gi|550341843|gb|ERP62872.1| hypothetical protein
POPTR_0004s23670g [Populus trichocarpa]
Length = 462
Score = 391 bits (1005), Expect = e-106
Identities = 188/247 (76%), Positives = 213/247 (86%)
Frame = +3
Query: 3 RESSGLLLMGRTKESISHLHWLFSDVRKAKPFSKEWNDACEEMYQRYWALVIGSPKQKEG 182
RESSGLLLMGRTKESI+HL LFS + KA+ WNDACE YQRYWALVIGSPK KEG
Sbjct: 218 RESSGLLLMGRTKESIAHLQLLFSYINKAQSKCHAWNDACEATYQRYWALVIGSPKDKEG 277
Query: 183 LICAPLTKVLLDDGETERVILANNSGLEASQEAITEYRVLGPTINGCSWIELRPYTSRKH 362
LI A L+KVLLDDG+TERV+LA +S LE S++A+TEYRVLGPTINGCSWIELRP TSRKH
Sbjct: 278 LISARLSKVLLDDGKTERVVLAQHSSLEPSRDAVTEYRVLGPTINGCSWIELRPLTSRKH 337
Query: 363 QLRVHCAEALGTPIVGDYKYGWFVHNRWKQMPRVDFEPTTGEPYKLRRPEGLDVQKGSVL 542
QLRVHCAEALGTPIVGDYKYGWFVH RWKQMPRVD EP++G+PYKLR PEG+D+QKGSVL
Sbjct: 338 QLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPSSGKPYKLRWPEGVDIQKGSVL 397
Query: 543 SKVPLLHLHCREMVLPNVAKFIELHKRPFGNYHVDPEHDSKPDILRFVAPMPSHMKISWN 722
+KVPLLHLHCRE+VLPN+AKF+++ N H P ++PD+LRFVA MPSHMKISWN
Sbjct: 398 AKVPLLHLHCRELVLPNIAKFLDVLDGKSENVH--PALSTRPDLLRFVASMPSHMKISWN 455
Query: 723 LMSSYLV 743
LMSS+LV
Sbjct: 456 LMSSFLV 462