BLASTX nr result

ID: Rehmannia25_contig00026879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00026879
         (474 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532599.1| nucleic acid binding protein, putative [Rici...    77   2e-12
ref|XP_004241270.1| PREDICTED: uncharacterized protein LOC101261...    75   7e-12
ref|XP_006365738.1| PREDICTED: zinc finger protein JACKDAW-like ...    75   9e-12
ref|XP_002282251.2| PREDICTED: uncharacterized protein LOC100248...    65   1e-08

>ref|XP_002532599.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527655|gb|EEF29765.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 543

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 65/171 (38%), Positives = 90/171 (52%), Gaps = 13/171 (7%)
 Frame = +1

Query: 1   LAEESARFTPVNIPPTNLNFRNHHDFTSSTGGSLNNLHHQNPGNSQFPTMFRPD------ 162
           LAEES RFTPV+    N N RN      +   +L   HHQ    SQF ++FRP+      
Sbjct: 191 LAEESGRFTPVSAA-INANLRNDL-INGANSINLPPPHHQTTVISQFSSVFRPEFGTTTA 248

Query: 163 -QLGGILDHQSGLDLQKPRLPMWLDNANPPPHHLNNFQLGTSSNT-LPAELVQMATTNPL 336
            +L G   +  G+D+QKPRLP+WLDNANP    LN   +G+++N+ LP ELVQ    N  
Sbjct: 249 SELLG--SNNLGVDVQKPRLPIWLDNANP---QLNPIGVGSNANSFLPHELVQTQQINMF 303

Query: 337 NN-----NWLFSRGQQDTSSSTIFPRGVVLKXXXXXXXXXXKGTLSEAINS 474
            +      WL S+ Q+   + ++ PRG+             KG L+E+I S
Sbjct: 304 GSGSSQLQWL-SKYQEGLFTGSL-PRGL-------KEEEGSKGDLTESITS 345


>ref|XP_004241270.1| PREDICTED: uncharacterized protein LOC101261125 [Solanum
           lycopersicum]
          Length = 528

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 72/177 (40%), Positives = 95/177 (53%), Gaps = 19/177 (10%)
 Frame = +1

Query: 1   LAEESARFTPVNIPPT-NLNFRNHHDFTSSTGGSLNNLHHQNPGNSQFPT-MFRPDQLGG 174
           LAEESARFT  ++P T NLNFRN        GG  N    Q+ GN QF + +FRP+ +G 
Sbjct: 191 LAEESARFT--SVPSTANLNFRNE---ILLNGGFGNTNLQQSTGNPQFGSNLFRPEFMGL 245

Query: 175 ILD------HQ---SGLDLQKPRLPMWLDNANPPPHHLNNFQLGTSSNT---LP-AELVQ 315
            LD      HQ   + +D QKPR+P+WLDN N  P+  N+F + +SS+T   LP  ELVQ
Sbjct: 246 GLDPAISHHHQPQLNNVDGQKPRIPLWLDN-NMNPNPGNDFLVASSSSTTSNLPHHELVQ 304

Query: 316 MATTNPLNNNWLFSRGQQDT----SSSTIFPRGVVLKXXXXXXXXXXKGTLSEAINS 474
           +A  N     ++   G  D     SSS+  P  V+LK          K  +SE I+S
Sbjct: 305 IAAHNNTQQWFINGTGVGDDSGIGSSSSQLPSRVLLK-----EEEENKRNMSETISS 356


>ref|XP_006365738.1| PREDICTED: zinc finger protein JACKDAW-like [Solanum tuberosum]
          Length = 528

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 68/156 (43%), Positives = 88/156 (56%), Gaps = 18/156 (11%)
 Frame = +1

Query: 1   LAEESARFTPVNIPPT-NLNFRNHHDFTSSTGGSLNNLHHQNPGNSQFPT-MFRPDQLGG 174
           LAEESARFT  ++P T NLNFRN        G +  N+ H   GN QF + +FRP+ +G 
Sbjct: 191 LAEESARFT--SVPSTANLNFRNEILLNGEFGNT--NVQHST-GNPQFGSNLFRPEFMGL 245

Query: 175 ILD-------HQ---SGLDLQKPRLPMWLDNANPPPHHLNNFQLGTSSNT---LP-AELV 312
            LD       HQ   + +D QKPR+P+WLDN N  P+  N+F + +SS+T   LP  ELV
Sbjct: 246 GLDPAISHHHHQPQLNNVDGQKPRIPLWLDN-NMNPNPGNDFLVASSSSTTSNLPHHELV 304

Query: 313 QMATTNPLNNNWLFSRGQQD--TSSSTIFPRGVVLK 414
           Q+A  N  NN   F  G      SSS+  P  V+LK
Sbjct: 305 QIAAHN--NNQQWFINGDDSGIGSSSSQLPSRVLLK 338


>ref|XP_002282251.2| PREDICTED: uncharacterized protein LOC100248459 [Vitis vinifera]
          Length = 527

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 67/175 (38%), Positives = 89/175 (50%), Gaps = 17/175 (9%)
 Frame = +1

Query: 1   LAEESARFTPVNIPPTNLNFRNHHDFTSSTGGSLNNLH-HQNPGNSQFPTMFRPDQLGG- 174
           LAEESAR T V+ P  N  FRN         GS++N   H  P   QF ++FRP+ +G  
Sbjct: 190 LAEESARLTSVSAP--NPIFRNE-----LMNGSISNPQAHIIP---QFSSVFRPEFVGSE 239

Query: 175 -ILDHQSGLDLQKPRLPMWLDNANPPPHHLNNFQLGTSSN-----TLPAELVQMATTNPL 336
            ++ H +  D QKPRLP+WLD+AN    HLNN  +G ++N        A L +M  T P+
Sbjct: 240 QLVGHLNA-DGQKPRLPLWLDHAN---SHLNN-PIGVNTNGSFLAPTSAGLPEMVQTAPM 294

Query: 337 N---------NNWLFSRGQQDTSSSTIFPRGVVLKXXXXXXXXXXKGTLSEAINS 474
           +         N WL    +   +SST+ PR  VLK          KG LSE+I S
Sbjct: 295 SMYGSPASSQNQWLQRCSEASFTSSTL-PR--VLK-----EEEENKGNLSESITS 341


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