BLASTX nr result

ID: Rehmannia25_contig00026850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00026850
         (340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347854.1| PREDICTED: Fanconi anemia group D2 protein h...    57   3e-06
ref|XP_004231232.1| PREDICTED: Fanconi anemia group D2 protein h...    56   4e-06

>ref|XP_006347854.1| PREDICTED: Fanconi anemia group D2 protein homolog [Solanum
            tuberosum]
          Length = 1503

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 41/111 (36%), Positives = 54/111 (48%)
 Frame = -3

Query: 338  LPELYPHWELSPVIQFDYVRDSENMSQSLKXXXXXXXXXXXXXGKSSLPSANSNIEEKLR 159
            LPEL PH E   + Q D+ RD E  +++                K    S  S  + KLR
Sbjct: 845  LPELQPHPESLSLNQLDHNRDQEMKNEN----GNGNVGLSQKKKKEKKNSQASLTDGKLR 900

Query: 158  QPTIVDIWRKAGAIPSQEALKEDVSVMSSKTIQSESEGNQAGNSNMSQDIE 6
            QPTI+D+ RKAGA+P+QE      S   SK    E   NQ  N NMS +++
Sbjct: 901  QPTIMDVLRKAGAVPTQEP-STGPSGTCSKGSAPEPSVNQPRNINMSANVD 950


>ref|XP_004231232.1| PREDICTED: Fanconi anemia group D2 protein homolog [Solanum
            lycopersicum]
          Length = 1516

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = -3

Query: 338  LPELYPHWELSPVIQFDYVRDSENMSQSLKXXXXXXXXXXXXXGKSSLPSANSNIEE-KL 162
            LPEL PH E     Q D+ RD E     +K              K    S+ +++ + +L
Sbjct: 844  LPELQPHLESLSPNQLDHNRDQE-----MKNGNGNGNVGPSQKKKKEKKSSQASLTDGQL 898

Query: 161  RQPTIVDIWRKAGAIPSQEALKEDVSVMSSKTIQSESEGNQAGNSNMSQDIE 6
            RQPTI+D+ RKAGA+PSQE      S   SK    E   NQ  N NMS +++
Sbjct: 899  RQPTIMDVLRKAGAVPSQEP-STAPSGTCSKGSAPEPSVNQPRNVNMSANVD 949


Top