BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00026849
         (419 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...    59   7e-07
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]    59   7e-07
ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citr...    57   3e-06
ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3...    57   3e-06
gb|EOY03369.1| Nonsense-mediated mRNA decay NMD3 family protein ...    57   3e-06
gb|EOY03368.1| Nonsense-mediated mRNA decay NMD3 family protein ...    57   3e-06
ref|XP_006350665.1| PREDICTED: 60S ribosomal export protein NMD3...    55   1e-05

>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 10/66 (15%)
 Frame = +3

Query: 24  SWKLRSLDMEIDAAEGG------DNEYELFLRDLEEDPGSVFNLSL----EIQPSENMAS 173
           SWKL+SL+ME+D ++G       + EYE+FLRDLEEDP   FN+SL    E QPSE MAS
Sbjct: 419 SWKLKSLNMEVDDSKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSE-MAS 477

Query: 174 GINGGD 191
             +G D
Sbjct: 478 MTDGED 483


>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
          Length = 594

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/66 (54%), Positives = 45/66 (68%), Gaps = 10/66 (15%)
 Frame = +3

Query: 24  SWKLRSLDMEIDAAEGG------DNEYELFLRDLEEDPGSVFNLSL----EIQPSENMAS 173
           SWKL+SL+ME+D ++G       + EYE+FLRDLEEDP   FN+SL    E QPSE MAS
Sbjct: 419 SWKLKSLNMEVDDSKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSE-MAS 477

Query: 174 GINGGD 191
             +G D
Sbjct: 478 MTDGED 483


>ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citrus clementina]
           gi|557532730|gb|ESR43913.1| hypothetical protein
           CICLE_v10011515mg [Citrus clementina]
          Length = 511

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 10/72 (13%)
 Frame = +3

Query: 6   KKIQKCSWKLRSLDMEIDAAEGG------DNEYELFLRDLEEDPGSVFNLSL----EIQP 155
           K+ +  SWKL+SLDME+D ++G       + EYE FLRDLEE+P   FN+SL    + QP
Sbjct: 413 KRSKPRSWKLKSLDMEVDDSKGRTDQEKMNKEYEEFLRDLEENPELRFNISLYRNKDYQP 472

Query: 156 SENMASGINGGD 191
           SE MAS  +G D
Sbjct: 473 SE-MASVTDGED 483


>ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3-like, partial [Citrus
           sinensis]
          Length = 523

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 14/77 (18%)
 Frame = +3

Query: 3   EKKIQKC----SWKLRSLDMEIDAAEGG------DNEYELFLRDLEEDPGSVFNLSL--- 143
           EK+++K     SWKL+SLDME+D ++G       + EYE FLRDLEE+P   FN+SL   
Sbjct: 421 EKRLRKRGKPRSWKLKSLDMEVDDSKGRTDQEKMNKEYEEFLRDLEENPELRFNVSLYRN 480

Query: 144 -EIQPSENMASGINGGD 191
            + QPSE MAS  +G D
Sbjct: 481 KDYQPSE-MASVTDGED 496


>gb|EOY03369.1| Nonsense-mediated mRNA decay NMD3 family protein isoform 2
           [Theobroma cacao] gi|508711473|gb|EOY03370.1|
           Nonsense-mediated mRNA decay NMD3 family protein isoform
           2 [Theobroma cacao]
          Length = 506

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 10/73 (13%)
 Frame = +3

Query: 3   EKKIQKCSWKLRSLDMEIDAAEGG------DNEYELFLRDLEEDPGSVFNLSL----EIQ 152
           +K+ +  SWKL+SLDME+D  +G       ++EYE FLRDLEE+P   FNLSL    + Q
Sbjct: 408 KKRGKPRSWKLKSLDMEVDDTKGRAYEEKMNSEYEGFLRDLEENPELRFNLSLYRNRDYQ 467

Query: 153 PSENMASGINGGD 191
           PSE MAS   G D
Sbjct: 468 PSE-MASVSEGDD 479


>gb|EOY03368.1| Nonsense-mediated mRNA decay NMD3 family protein isoform 1
           [Theobroma cacao]
          Length = 520

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 10/73 (13%)
 Frame = +3

Query: 3   EKKIQKCSWKLRSLDMEIDAAEGG------DNEYELFLRDLEEDPGSVFNLSL----EIQ 152
           +K+ +  SWKL+SLDME+D  +G       ++EYE FLRDLEE+P   FNLSL    + Q
Sbjct: 422 KKRGKPRSWKLKSLDMEVDDTKGRAYEEKMNSEYEGFLRDLEENPELRFNLSLYRNRDYQ 481

Query: 153 PSENMASGINGGD 191
           PSE MAS   G D
Sbjct: 482 PSE-MASVSEGDD 493


>ref|XP_006350665.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum
           tuberosum]
          Length = 511

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 11/74 (14%)
 Frame = +3

Query: 3   EKKIQKCSWKLRSLDMEIDAAEGG-------DNEYELFLRDLEEDPGSVFNLSL----EI 149
           +K+ +  SWKL+SL+MEID    G       ++EYE FLRDLEE+P   FN+SL    E 
Sbjct: 412 KKRGKPRSWKLKSLNMEIDDNVKGRDHEEKMNSEYEQFLRDLEENPDLRFNISLYRNKEY 471

Query: 150 QPSENMASGINGGD 191
           QPSE MAS  +G D
Sbjct: 472 QPSE-MASVTDGDD 484