BLASTX nr result
ID: Rehmannia25_contig00026814
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00026814
(414 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADB85304.1| putative retrotransposon protein [Phyllostachys e... 97 6e-24
ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827... 98 5e-21
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera] 105 8e-21
gb|ABA97314.2| retrotransposon protein, putative, unclassified [... 100 1e-20
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 99 1e-20
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 99 1e-20
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] 95 2e-20
emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera] 103 2e-20
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera] 103 2e-20
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera] 103 2e-20
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 96 3e-20
emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera] 103 3e-20
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 102 4e-20
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] 102 4e-20
gb|AAP44617.1| putative polyprotein [Oryza sativa Japonica Group... 96 6e-20
gb|AAS07071.1| putative integrase, 3'-partial [Oryza sativa Japo... 96 6e-20
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 102 7e-20
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group] 100 8e-20
gb|AAN59765.1| Putative retroelement [Oryza sativa Japonica Grou... 101 9e-20
emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group] 92 1e-19
>gb|ADB85304.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 335
Score = 97.4 bits (241), Expect(2) = 6e-24
Identities = 39/61 (63%), Positives = 47/61 (77%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ D +TE +NQCLE YLR M P++W+ WL+LAE+WYNT YH LK+TPFQALYGY
Sbjct: 98 PQTDRQTERVNQCLEAYLRSMTFQEPREWMNWLTLAEWWYNTTYHTSLKVTPFQALYGYP 157
Query: 248 P 250
P
Sbjct: 158 P 158
Score = 38.9 bits (89), Expect(2) = 6e-24
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +3
Query: 309 VQQTRQMVQDLRENLQQAQNHMKVYADTSRTGGKF 413
V+Q QM++ L+ NL AQ+ MK YAD SRT +F
Sbjct: 178 VEQKEQMLEQLKSNLHNAQDRMKHYADKSRTERQF 212
>ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827899 [Brachypodium
distachyon]
Length = 1665
Score = 98.2 bits (243), Expect(2) = 5e-21
Identities = 40/66 (60%), Positives = 49/66 (74%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+TE LNQCLETYLRC+VH P +W +WL AEYWYNTN+H L +PF+ LYG
Sbjct: 1391 PQTDGQTERLNQCLETYLRCLVHAKPNRWARWLPQAEYWYNTNFHSALGRSPFEVLYGRK 1450
Query: 248 PSMLSI 265
P L++
Sbjct: 1451 PRNLAM 1456
Score = 28.5 bits (62), Expect(2) = 5e-21
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 3 SSFSKELFKLMGIRLHMSLSYYPKLMGK 86
SSF ++LFKL L++S SY+P+ G+
Sbjct: 1369 SSFWQQLFKLADTTLNLSSSYHPQTDGQ 1396
>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
Length = 1412
Score = 105 bits (261), Expect = 8e-21
Identities = 44/84 (52%), Positives = 60/84 (71%)
Frame = +2
Query: 5 LFLKRVVQTHGYSFAHVLILLPQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYW 184
+F + + G S PQ DG+TE +N+C+ETYLRCMV +NP QW W+SLAE+W
Sbjct: 1165 VFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMVGDNPGQWANWISLAEFW 1224
Query: 185 YNTNYHIGLKLTPFQALYGYSPSM 256
YNT+YH LK++PF+ALYGY+P +
Sbjct: 1225 YNTSYHSSLKMSPFEALYGYAPPL 1248
>gb|ABA97314.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1219
Score = 99.8 bits (247), Expect(2) = 1e-20
Identities = 40/68 (58%), Positives = 50/68 (73%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+TE +NQCLET+LRC VH P QW +WL+LAEYWYNT++H L TPF+ LYG+
Sbjct: 1119 PQTDGQTERVNQCLETFLRCFVHACPSQWSRWLALAEYWYNTSFHSALGTTPFEVLYGHK 1178
Query: 248 PSMLSIGA 271
P + A
Sbjct: 1179 PRYFGLSA 1186
Score = 25.8 bits (55), Expect(2) = 1e-20
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 21 LFKLMGIRLHMSLSYYPKLMGK 86
LFKL +L +S SYYP+ G+
Sbjct: 1103 LFKLASTQLRLSSSYYPQTDGQ 1124
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 98.6 bits (244), Expect(2) = 1e-20
Identities = 44/87 (50%), Positives = 56/87 (64%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+TE +NQCLE+YLR M P QW WLSLA +WYNT YH L++TPFQALYGY
Sbjct: 1292 PQTDGQTERVNQCLESYLRNMTFQEPHQWYSWLSLAGWWYNTTYHTSLQMTPFQALYGYP 1351
Query: 248 PSMLSIGAYVDSSSGEGKKFSTANKAD 328
P ++ + + S E + + N D
Sbjct: 1352 PPQINEFSISCNVSAEARTERSLNVGD 1378
Score = 26.6 bits (57), Expect(2) = 1e-20
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 3 SSFSKELFKLMGIRLHMSLSYYPKLMGK 86
S +E+FK M ++L S SY+P+ G+
Sbjct: 1270 SQLFQEIFKSMKVQLRFSTSYHPQTDGQ 1297
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 98.6 bits (244), Expect(2) = 1e-20
Identities = 44/87 (50%), Positives = 56/87 (64%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+TE +NQCLE+YLR M P QW WLSLA +WYNT YH L++TPFQALYGY
Sbjct: 1190 PQTDGQTERVNQCLESYLRNMTFQEPHQWYSWLSLAGWWYNTTYHTSLQMTPFQALYGYP 1249
Query: 248 PSMLSIGAYVDSSSGEGKKFSTANKAD 328
P ++ + + S E + + N D
Sbjct: 1250 PPQINEFSISCNVSAEARTERSLNVGD 1276
Score = 26.6 bits (57), Expect(2) = 1e-20
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 3 SSFSKELFKLMGIRLHMSLSYYPKLMGK 86
S +E+FK M ++L S SY+P+ G+
Sbjct: 1168 SQLFQEIFKSMKVQLRFSTSYHPQTDGQ 1195
>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
Length = 1434
Score = 95.1 bits (235), Expect(2) = 2e-20
Identities = 37/61 (60%), Positives = 48/61 (78%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ+DG+TE +NQC+E YLRCMV P+ W KWL AE+WYNT+YH L++TP++ALYG
Sbjct: 1197 PQSDGQTERVNQCVEAYLRCMVFQEPRDWHKWLPTAEWWYNTSYHTSLQVTPYEALYGVH 1256
Query: 248 P 250
P
Sbjct: 1257 P 1257
Score = 29.6 bits (65), Expect(2) = 2e-20
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 297 VKNLVQQTRQMVQDLRENLQQAQNHMKVYADTSRTGGKF 413
++ QQ +++ L++NL +AQN +K +AD R+ F
Sbjct: 1273 IRITAQQREELMLRLKDNLLRAQNRIKKFADRLRSERSF 1311
>emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]
Length = 672
Score = 103 bits (257), Expect = 2e-20
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +2
Query: 5 LFLKRVVQTHGYSFAHVLILLPQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYW 184
+F + + G S PQ DG+TE +N+C+ETYLRCM +NP QW W+SLAE+W
Sbjct: 328 VFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNPGQWANWISLAEFW 387
Query: 185 YNTNYHIGLKLTPFQALYGYSPSM 256
YNT+YH LK++PF+ALYGY+P +
Sbjct: 388 YNTSYHSSLKMSPFEALYGYAPPL 411
>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
Length = 1371
Score = 103 bits (257), Expect = 2e-20
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +2
Query: 5 LFLKRVVQTHGYSFAHVLILLPQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYW 184
+F + + G S PQ DG+TE +N+C+ETYLRCM +NP QW W+SLAE+W
Sbjct: 1190 VFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNPGQWANWISLAEFW 1249
Query: 185 YNTNYHIGLKLTPFQALYGYSPSM 256
YNT+YH LK++PF+ALYGY+P +
Sbjct: 1250 YNTSYHSSLKMSPFEALYGYAPPL 1273
>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
Length = 1378
Score = 103 bits (257), Expect = 2e-20
Identities = 43/84 (51%), Positives = 59/84 (70%)
Frame = +2
Query: 5 LFLKRVVQTHGYSFAHVLILLPQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYW 184
+F + + G S PQ DG+TE +N+C+ETYLRCM +NP QW W+SLAE+W
Sbjct: 1134 VFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNPGQWANWISLAEFW 1193
Query: 185 YNTNYHIGLKLTPFQALYGYSPSM 256
YNT+YH LK++PF+ALYGY+P +
Sbjct: 1194 YNTSYHSSLKMSPFEALYGYAPPL 1217
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 96.3 bits (238), Expect(2) = 3e-20
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+TE +NQCLE+YLR M P +W WL+LAE+WYNT YH +++TPFQALYGY
Sbjct: 1333 PQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYGYP 1392
Query: 248 PSMLS 262
P ++
Sbjct: 1393 PPQIN 1397
Score = 27.7 bits (60), Expect(2) = 3e-20
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 3 SSFSKELFKLMGIRLHMSLSYYPKLMGK 86
S +E+FK M +RL S SY+P+ G+
Sbjct: 1311 SQLFQEIFKSMKVRLKFSTSYHPQTDGQ 1338
>emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
Length = 1357
Score = 103 bits (256), Expect = 3e-20
Identities = 40/63 (63%), Positives = 53/63 (84%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+TE +N+C+ETYLRCM +NP QW W+SLAE+WYNT+YH LK++PF+ALYGY+
Sbjct: 1102 PQTDGQTEVVNRCIETYLRCMAGDNPGQWANWISLAEFWYNTSYHSSLKMSPFEALYGYA 1161
Query: 248 PSM 256
P +
Sbjct: 1162 PPL 1164
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 102 bits (255), Expect = 4e-20
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+TE +NQC+E+YLRCM PK+W+ WL LAE+WYNT +H LKL+PFQALYG+
Sbjct: 1083 PQTDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFP 1142
Query: 248 PSMLSIGAYVDSSSGEGKKF 307
P +++ A E + F
Sbjct: 1143 PPLINEVAIPGPEDNEARDF 1162
>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 102 bits (255), Expect = 4e-20
Identities = 46/89 (51%), Positives = 57/89 (64%)
Frame = +2
Query: 5 LFLKRVVQTHGYSFAHVLILLPQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYW 184
LFL+ + H S H PQ+DG+TE +NQCLE YLRC VH+ P +W WL LAEYW
Sbjct: 1255 LFLRAGTKLHYSSAYH-----PQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWLHLAEYW 1309
Query: 185 YNTNYHIGLKLTPFQALYGYSPSMLSIGA 271
YN+ YH L TPF+ LYGY P+ I +
Sbjct: 1310 YNSTYHSSLGTTPFEVLYGYPPNHFGISS 1338
>gb|AAP44617.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708833|gb|ABF96628.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 627
Score = 95.5 bits (236), Expect(2) = 6e-20
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+T+ +NQCLE+YLR M P+ W WL+LAE+WYNT YH L++TPFQALYGY
Sbjct: 98 PQTDGQTKRVNQCLESYLRNMTFKEPQHWYSWLALAEWWYNTTYHTSLQMTPFQALYGYP 157
Query: 248 PSMLS 262
P ++
Sbjct: 158 PPRIN 162
Score = 27.3 bits (59), Expect(2) = 6e-20
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 3 SSFSKELFKLMGIRLHMSLSYYPKLMGK 86
S F +E+FK M + L S +Y+P+ G+
Sbjct: 76 SQFFQEVFKAMKVHLRFSTAYHPQTDGQ 103
>gb|AAS07071.1| putative integrase, 3'-partial [Oryza sativa Japonica Group]
Length = 303
Score = 95.5 bits (236), Expect(2) = 6e-20
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+T+ +NQCLE+YLR M P+ W WL+LAE+WYNT YH L++TPFQALYGY
Sbjct: 98 PQTDGQTKRVNQCLESYLRNMTFKEPQHWYSWLALAEWWYNTTYHTSLQMTPFQALYGYP 157
Query: 248 PSMLS 262
P ++
Sbjct: 158 PPRIN 162
Score = 27.3 bits (59), Expect(2) = 6e-20
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 3 SSFSKELFKLMGIRLHMSLSYYPKLMGK 86
S F +E+FK M + L S +Y+P+ G+
Sbjct: 76 SQFFQEVFKAMKVHLRFSTAYHPQTDGQ 103
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 102 bits (253), Expect = 7e-20
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+TE +NQCLE+YLRCM P+ W W++LAE+WYNT YH +++TPF+ALYGYS
Sbjct: 702 PQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFKALYGYS 761
Query: 248 PSMLS 262
P +S
Sbjct: 762 PPQIS 766
>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
Length = 642
Score = 99.8 bits (247), Expect(2) = 8e-20
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ+D +TE +NQCLE YLRC VH+ P +W WL LAEYWYNT++H ++ TPF+ LYG+S
Sbjct: 306 PQSDAQTERVNQCLEIYLRCFVHSVPTKWAAWLHLAEYWYNTSFHSSVQATPFEVLYGHS 365
Query: 248 PSMLSIGA 271
PS IG+
Sbjct: 366 PSHFGIGS 373
Score = 22.7 bits (47), Expect(2) = 8e-20
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 3 SSFSKELFKLMGIRLHMSLSYYPK 74
S + LF+ G +LH S +Y+P+
Sbjct: 284 SQLWEHLFEGAGTKLHFSSAYHPQ 307
>gb|AAN59765.1| Putative retroelement [Oryza sativa Japonica Group]
gi|108706656|gb|ABF94451.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 415
Score = 101 bits (252), Expect = 9e-20
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+TE +NQCLET+LRC VH P QW KWL+LAEYWYNT++H L TPF+ LYG+
Sbjct: 117 PQTDGQTERVNQCLETFLRCFVHTCPSQWSKWLALAEYWYNTSFHSALGTTPFEVLYGHK 176
Query: 248 PSM--LSIGAYVDS 283
P LS+ A +S
Sbjct: 177 PRYFGLSVNALCES 190
>emb|CAE05274.1| OSJNBb0014D23.8 [Oryza sativa Japonica Group]
Length = 1545
Score = 92.0 bits (227), Expect(2) = 1e-19
Identities = 38/66 (57%), Positives = 46/66 (69%)
Frame = +2
Query: 68 PQADGKTEHLNQCLETYLRCMVHNNPKQWLKWLSLAEYWYNTNYHIGLKLTPFQALYGYS 247
PQ DG+TE +NQCLE YLRC VH P +W WL LAE+W+NT+YH L +PF+ LYGY
Sbjct: 731 PQTDGQTERVNQCLEIYLRCFVHAMPSKWSSWLYLAEFWFNTSYHSTLFKSPFEVLYGYP 790
Query: 248 PSMLSI 265
P I
Sbjct: 791 PGHFGI 796
Score = 30.0 bits (66), Expect(2) = 1e-19
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 309 VQQTRQMVQDLRENLQQAQNHMKVYADTSRTGGKF 413
+ + + M Q L+++L +AQ MKVYAD R+ +F
Sbjct: 810 LSERKLMTQLLKQHLIRAQQQMKVYADKKRSFREF 844