BLASTX nr result
ID: Rehmannia25_contig00026606
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00026606
(921 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 192 2e-46
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355... 182 2e-43
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ... 175 2e-41
ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625... 173 9e-41
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ... 169 2e-39
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ... 169 2e-39
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616... 163 1e-37
ref|XP_006577722.1| PREDICTED: putative ribonuclease H protein A... 157 4e-36
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 156 1e-35
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 149 2e-33
ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein A... 148 2e-33
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu... 143 8e-32
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ... 143 8e-32
ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein A... 137 7e-30
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm... 134 6e-29
ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein A... 131 4e-28
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici... 129 2e-27
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum] 128 3e-27
gb|EEE57524.1| hypothetical protein OsJ_07834 [Oryza sativa Japo... 128 3e-27
ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein A... 127 8e-27
>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
Length = 440
Score = 192 bits (487), Expect = 2e-46
Identities = 100/291 (34%), Positives = 148/291 (50%)
Frame = +1
Query: 49 WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSCN 228
W++LW + +P KVKHFMWR D LPT NL KK ++V C+ CH E+ HI L C
Sbjct: 123 WNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESICHILLQCP 182
Query: 229 FAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNELW 408
FA CW +++ + ++ ++ L +Q +I W++W+ RN+ +W
Sbjct: 183 FARTCWMTSSI-----GFFGDGSNLLLWLEALFNRYSLEQTQLAVMICWSLWQNRNDMVW 237
Query: 409 DKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAWKKPTQFFLKCNVDAAC 588
+ +A FL +W+ RK + +Q + + W+ P LKCNVD A
Sbjct: 238 RGKTSGVQQLLNSAGHFLFQWQLVRKQQFLFSQPSPIGHGAICWEPPVAGRLKCNVDVAL 297
Query: 589 CNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIINLGMKQISVE 768
G G VIRD A + AR S G + ++AEA+GVREALSWI L + +++E
Sbjct: 298 FAFRGYIGFGNVIRDSNCAFMAARCCSIPGRFSARDAEALGVREALSWIKQLQLSNVTIE 357
Query: 769 TDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDISVTFAGREGNRVAH 921
D V + + ++ G S F I+ DCR L D+S +F R N VAH
Sbjct: 358 MDCLTVYNALVNNLSGPSSFSLIIEDCRALSNSIRDVSFSFVRRSANSVAH 408
>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
Cytochrome P450 [Medicago truncatula]
Length = 687
Score = 182 bits (461), Expect = 2e-43
Identities = 97/293 (33%), Positives = 154/293 (52%), Gaps = 1/293 (0%)
Frame = +1
Query: 46 HWSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSC 225
+W+ +W + +PPKVK+F+WR R+CLPTR L K + + C +C E H+F C
Sbjct: 365 NWNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMC 424
Query: 226 NFAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNEL 405
+ ++ W+ L S + + + S V ++Q D+ Q V +W+IW+ RNN++
Sbjct: 425 SKSMLYWQRIGLWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKV 484
Query: 406 WDKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAWKKPTQFFLKCNVDAA 585
W+ A D A L WR A+ +H Q N + W KP+ CNVDA+
Sbjct: 485 WNNITDTAQDICARAGSLLTSWRNAQNIRHPSPQ-NPSTPNDLKWVKPSPGRFTCNVDAS 543
Query: 586 CCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIINLGMKQISV 765
+ + GIG+ IRD+ G ++A++ V+ EA+G+ A+ W+ +L + +
Sbjct: 544 FSQARNRVGIGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSAMHWVRDLQLGIVDF 603
Query: 766 ETDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDIS-VTFAGREGNRVAH 921
E D+K VVD +Y S G S F ++N+CR+LL + S V F R+ N VAH
Sbjct: 604 ELDSKSVVDSLYGSTSGVSNFSAVINECRRLLASDLVTSDVRFIRRQANEVAH 656
>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 393
Score = 175 bits (443), Expect = 2e-41
Identities = 95/311 (30%), Positives = 149/311 (47%), Gaps = 19/311 (6%)
Frame = +1
Query: 46 HWSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSC 225
+WS +W + +PP+VK +WRV R+C PTR L + ++ + C+ C E C+HIF C
Sbjct: 55 YWSGIWRLKVPPRVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHC 114
Query: 226 NFAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNEL 405
A++ W A + ++ L ++ D + NL+Q Q+ I IMW+IW+ RN +L
Sbjct: 115 RTAIDVWNTANVWHLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKL 174
Query: 406 WDKSHKPAADTVFNAVKFLVEWRAARKGKHAV---------------NQGNKQEEKVVAW 540
W + + + + A L WR A + + +Q + W
Sbjct: 175 WQQVSESSVTILERAKHLLEGWRKANHKQGLLGQVHSPTNSRPQTHDSQNTDNRYGNIRW 234
Query: 541 KKPTQFFLKCNVDAACCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVRE 720
+KP LKCNVDA+ SS K GIGM IRD G + ++++ F V EA+G+
Sbjct: 235 RKPKSGRLKCNVDASFSTSSNKVGIGMCIRDSEGNHVRSKTMWFSPLCPVNIGEALGLYH 294
Query: 721 ALSWIINLGMKQISVETDAKIVVDGIYSSDKGDSEFDTILND----CRKLLVGEPDISVT 888
A WI L + + E D+K + D + ++EF +I+ + C L V
Sbjct: 295 ATRWINELQLTNVDFEVDSKTIADYFNKARGDNTEFGSIMENTIQFCNIFLTNS---HVE 351
Query: 889 FAGREGNRVAH 921
F R+ N VAH
Sbjct: 352 FTRRQANEVAH 362
>ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis]
Length = 412
Score = 173 bits (438), Expect = 9e-41
Identities = 86/243 (35%), Positives = 140/243 (57%), Gaps = 1/243 (0%)
Frame = +1
Query: 49 WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSCN 228
W KLW+ +P KVK+F+WR + + LPT NL K++DV C +C+ ET H ++C+
Sbjct: 170 WRKLWNSKVPNKVKNFIWRAAHNVLPTALNLISKRVDVPAMCSVCNAYEETVLHSLVACS 229
Query: 229 FAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNELW 408
FA +CW +++ V C + D++ ++ KD+ + +I W IW RNN++W
Sbjct: 230 FAKSCWTSSSV-GFVGYC----SNFLDWLAHVFTRCSKDECNTAMMICWRIWVNRNNKVW 284
Query: 409 DKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQG-NKQEEKVVAWKKPTQFFLKCNVDAA 585
+ + + +A +FL +W+AA++ VN ++ + W++P ++KCNVDAA
Sbjct: 285 NNTTSSVCQILNSAGQFLYQWQAAKQQVFDVNDDTHRLVHGALCWEQPKFGWVKCNVDAA 344
Query: 586 CCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIINLGMKQISV 765
S K GIG VIR+ G + AR +S G + +EAEA+G+REALSW+ L + + +
Sbjct: 345 VFESQGKIGIGCVIRNSQGGFVAARCVSVAGIFGAREAEALGIREALSWMKELQIPCVII 404
Query: 766 ETD 774
E D
Sbjct: 405 EMD 407
>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 519
Score = 169 bits (427), Expect = 2e-39
Identities = 97/323 (30%), Positives = 161/323 (49%), Gaps = 31/323 (9%)
Frame = +1
Query: 46 HWSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSC 225
+WS +W + +PPK+K+FMWRV R LPTR L K + C+ C E H+F C
Sbjct: 167 YWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVC 226
Query: 226 NFAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNEL 405
F V W+ + L S ++ + + ++ S + +L+Q +Q S+I V MW++W++RN ++
Sbjct: 227 TFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQ-SQIFVTMWSLWKRRNLKV 285
Query: 406 WDKSHKPAADTVFNAVKFLVEWRAAR----------------------------KGKHAV 501
W+ ++ A TV A + EW+ A + H
Sbjct: 286 WENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQQSHVA 345
Query: 502 NQGNKQEEKV--VAWKKPTQFFLKCNVDAACCNSSKKTGIGMVIRDDMGACLVARSISFQ 675
+ + Q+ V ++W++P++ KCNVDA S + GIG+ +RDD GA ++A++ISF
Sbjct: 346 SAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVLAKTISFD 405
Query: 676 GNYQVKEAEAIGVREALSWIINLGMKQISVETDAKIVVDGIYSSDKGDSEFDTILNDCRK 855
+ V+ EA+G+ AL W+ ++ + D+KI D S SEF I++ +
Sbjct: 406 VVHPVRVGEALGLYHALEWLSDMQFDNMDFAMDSKITYDAFNSQKDDISEFGHIISARQS 465
Query: 856 LLVGE-PDISVTFAGREGNRVAH 921
L + V F R+ N AH
Sbjct: 466 LFSTHFTNSRVEFIRRQANAAAH 488
>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 612
Score = 169 bits (427), Expect = 2e-39
Identities = 97/323 (30%), Positives = 161/323 (49%), Gaps = 31/323 (9%)
Frame = +1
Query: 46 HWSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSC 225
+WS +W + +PPK+K+FMWRV R LPTR L K + C+ C E H+F C
Sbjct: 260 YWSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVC 319
Query: 226 NFAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNEL 405
F V W+ + L S ++ + + ++ S + +L+Q +Q S+I V MW++W++RN ++
Sbjct: 320 TFDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQ-SQIFVTMWSLWKRRNLKV 378
Query: 406 WDKSHKPAADTVFNAVKFLVEWRAAR----------------------------KGKHAV 501
W+ ++ A TV A + EW+ A + H
Sbjct: 379 WENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQQSHVA 438
Query: 502 NQGNKQEEKV--VAWKKPTQFFLKCNVDAACCNSSKKTGIGMVIRDDMGACLVARSISFQ 675
+ + Q+ V ++W++P++ KCNVDA S + GIG+ +RDD GA ++A++ISF
Sbjct: 439 SAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVLAKTISFD 498
Query: 676 GNYQVKEAEAIGVREALSWIINLGMKQISVETDAKIVVDGIYSSDKGDSEFDTILNDCRK 855
+ V+ EA+G+ AL W+ ++ + D+KI D S SEF I++ +
Sbjct: 499 VVHPVRVGEALGLYHALEWLSDMQFDNMDFAMDSKITYDAFNSQKDDISEFGHIISARQS 558
Query: 856 LLVGE-PDISVTFAGREGNRVAH 921
L + V F R+ N AH
Sbjct: 559 LFSTHFTNSRVEFIRRQANAAAH 581
>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
Length = 510
Score = 163 bits (412), Expect = 1e-37
Identities = 90/292 (30%), Positives = 146/292 (50%), Gaps = 1/292 (0%)
Frame = +1
Query: 49 WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSCN 228
W K+W + +P KVKHF+W + LPT NL + +++V + C IC+ E H ++C+
Sbjct: 196 WQKVWKLKVPAKVKHFIWCAVVNVLPTADNLRRCQVEVPSVCPICNAYDEIVAHCLVNCS 255
Query: 229 FAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNELW 408
FA +CW + + V C E+ D++ + D + W++W +N ++W
Sbjct: 256 FAKSCWLLSPI-GYVGGC----ENFMDWLEGIFSRYSSDDCDLAAMTCWSLWENKNAKVW 310
Query: 409 DKSHKPAADTVFN-AVKFLVEWRAARKGKHAVNQGNKQEEKVVAWKKPTQFFLKCNVDAA 585
K+ K +V N A + L +W++ RK + N V W++P ++ KCNVDA
Sbjct: 311 -KNRKGRLSSVLNLAGQVLFQWKSVRKLQVFDNNSVSSSHGAVCWQRPCVWWFKCNVDAT 369
Query: 586 CCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIINLGMKQISV 765
SS G VI++ G + ARS ++ +EAEAIGVRE LSW+ L + +
Sbjct: 370 TFLSSGTIMYGAVIQNSEGEFVTARSNWLISSFGAREAEAIGVREILSWLKGLPFLHVII 429
Query: 766 ETDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDISVTFAGREGNRVAH 921
E D+ V + + F +++DCR L D++ +F R N AH
Sbjct: 430 EMDSLQVFTALTMDSFSPNGFGLLIDDCRALAQSLGDVTFSFVRRSANSAAH 481
>ref|XP_006577722.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 249
Score = 157 bits (398), Expect = 4e-36
Identities = 74/234 (31%), Positives = 126/234 (53%)
Frame = +1
Query: 10 SLFAADQRSGDEHWSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHR 189
S+F + W LW + +P KVK F+WR R CLPTR L K + C +C
Sbjct: 3 SVFESSHLKVAGRWKDLWKLQVPNKVKVFLWRAVRGCLPTRLRLQTKGVVCTGICPLCLN 62
Query: 190 ELETCWHIFLSCNFAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVI 369
LE WH ++C + CW+ A +V+ +++A+S D + L+ K ++S++ ++
Sbjct: 63 NLENEWHCLVACPSNLVCWKLAGFWNVIRVQVDSADSFDDLIFRLLASISKAKISQVVML 122
Query: 370 MWNIWRQRNNELWDKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAWKKP 549
MW +W + N ++W+ + + + TV A L +W + + +V Q ++ W KP
Sbjct: 123 MWVLWWRSNGKVWEDADRSPSVTVRRATNCLTDWGKCHRRRVSVPQ---RQISPPQWVKP 179
Query: 550 TQFFLKCNVDAACCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIG 711
F KCN+DAA + ++ G+GM +RD +G ++A+S+ +G Q EAEA+G
Sbjct: 180 PLVFAKCNLDAAVFGNQRRFGLGMCLRDSLGRFIIAKSVLVEGMLQPVEAEALG 233
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 156 bits (394), Expect = 1e-35
Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 1/295 (0%)
Frame = +1
Query: 40 DEHWSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFL 219
D +W LW++ +PPKVK F+WR R+ LPTR L + ++ C +C E E H+F
Sbjct: 1414 DGNWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFF 1473
Query: 220 SCNFAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNN 399
C + CW+ L S V+ + S + ++Q D Q +MW+IW+QRN+
Sbjct: 1474 YCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRND 1533
Query: 400 ELWDKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAWKKPTQFFLKCNVD 579
+W A + L W+ A+ W+KP + KCNVD
Sbjct: 1534 CIWRNEVMTTAAVRDRGLNLLTGWQNAQD----------------IWRKPDEGHFKCNVD 1577
Query: 580 AACCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIINLGMKQI 759
AA S + GIG+ IRDD G + AR+ V E EAIG+ A+ W + I
Sbjct: 1578 AAFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNNI 1637
Query: 760 SVETDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVG-EPDISVTFAGREGNRVAH 921
+ E D+K VV +++ S+ I+ +CR + V F R+ N V H
Sbjct: 1638 TFELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSFFTNSRVEFIRRQANEVVH 1692
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 149 bits (375), Expect = 2e-33
Identities = 92/291 (31%), Positives = 131/291 (45%)
Frame = +1
Query: 49 WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSCN 228
W++LW + PPK+ +F WR +R+CLPTR L + +D CC IC ELET H + C
Sbjct: 508 WAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECV 567
Query: 229 FAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNELW 408
A + W+ +S + N S D++ + D +K + W +W +RN+ +W
Sbjct: 568 AARDVWD----ESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVW 623
Query: 409 DKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAWKKPTQFFLKCNVDAAC 588
+ + V L W A + K W+KP ++K NVD A
Sbjct: 624 NGRIWHSQQVVNGCFTMLESWFHANETLATAVTVPSYSSK---WQKPDYGWIKINVDGAV 680
Query: 589 CNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIINLGMKQISVE 768
K IG V RD G + + F K EA+GVRE LSWI +I VE
Sbjct: 681 --FPDKGAIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVE 738
Query: 769 TDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDISVTFAGREGNRVAH 921
TD VV I ++ F I+ DC +L D+ V +A R N AH
Sbjct: 739 TDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAH 789
>ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 459
Score = 148 bits (374), Expect = 2e-33
Identities = 85/291 (29%), Positives = 142/291 (48%)
Frame = +1
Query: 49 WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSCN 228
W K+W + +P KV++F+WR + + LPT NL K + + + C++ + + ET H+ + C
Sbjct: 170 WRKIWKLEVPAKVRNFVWRAASNVLPTAVNLRSKHVSLNDLCLVGNFDKETVLHLLVDCP 229
Query: 229 FAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNELW 408
FA +CW +KS V S D+++ L + +Q ++ W +W RNN +W
Sbjct: 230 FARSCW----IKSKV-GFFGIYSSFKDWLQALFRNCTNEQCWIAVMVCWKLWCNRNNLVW 284
Query: 409 DKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAWKKPTQFFLKCNVDAAC 588
DT V AA G VAW P +LKCN+DA
Sbjct: 285 QGK----CDTTKQIVN------AAGVG-------------AVAWSPPRVGWLKCNIDATV 321
Query: 589 CNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIINLGMKQISVE 768
+ + G+G VIRD+ G + A +GNY ++AE + +REALS + ++ + ++ VE
Sbjct: 322 FANEGRVGLGSVIRDESGKFVAALCCHIRGNYSPRDAEVLSIREALSLLKSMKLSKVIVE 381
Query: 769 TDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDISVTFAGREGNRVAH 921
TD + + + F +++ DC+ + DI+ +F GR N +H
Sbjct: 382 TDCLQAFNALVDRKCPLNSFGSLVLDCKCIADSIGDIAFSFVGRSANSASH 432
>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
[Medicago truncatula]
Length = 547
Score = 143 bits (361), Expect = 8e-32
Identities = 70/186 (37%), Positives = 111/186 (59%)
Frame = +1
Query: 364 VIMWNIWRQRNNELWDKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAWK 543
+++W IWR+RN+++WD +P+ V A + L +W+AAR A Q + + +AW+
Sbjct: 1 MMLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAARNS--ATTQVQQSPQDTIAWQ 58
Query: 544 KPTQFFLKCNVDAACCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREA 723
P FLKCNVDAA + + G GM +RD G L A + ++G +EAEA+G+R+A
Sbjct: 59 PPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDA 118
Query: 724 LSWIINLGMKQISVETDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDISVTFAGRE 903
+ W+ L + + +E D K+VVD IY + +EF +I++DCR LL + ++F R+
Sbjct: 119 ILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRRQ 178
Query: 904 GNRVAH 921
N VAH
Sbjct: 179 ANVVAH 184
>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 355
Score = 143 bits (361), Expect = 8e-32
Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 2/259 (0%)
Frame = +1
Query: 4 ICS--LFAADQRSGDEHWSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCM 177
ICS L D + W +W++ IP +V+ F+WR++ +CLPTR NL + I E C+
Sbjct: 98 ICSDLLHPHDSAHNNSSWMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQCEESCV 157
Query: 178 ICHRELETCWHIFLSCNFAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSK 357
+ E H+F C A++CW+ L V+ L A + + + + M Q
Sbjct: 158 MFENFAECHTHLFFVCAKAMDCWKNIGLHVVLSELLPLANNFTTLLFDFMHRLCSQQQQA 217
Query: 358 ICVIMWNIWRQRNNELWDKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVA 537
+++W++W+ RN +LWD + A T+ A L EW + K N ++
Sbjct: 218 AGMLLWSLWKSRNIKLWDSTDTTTAITISRAKDTLHEWSCMQSAKTQPINPNHH----IS 273
Query: 538 WKKPTQFFLKCNVDAACCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVR 717
W KPT +KCN+DAA ++ G G+ R+ L+ +S + V EAEAI +
Sbjct: 274 WVKPTGGMIKCNMDAAIFQNNVAAGYGICCRNSEDELLLGKSAIIHSSLSVLEAEAIVLL 333
Query: 718 EALSWIINLGMKQISVETD 774
EA+ I+ G + ETD
Sbjct: 334 EAMKLSISSGFHHVYYETD 352
>ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 498
Score = 137 bits (344), Expect = 7e-30
Identities = 84/300 (28%), Positives = 131/300 (43%), Gaps = 9/300 (3%)
Frame = +1
Query: 49 WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSCN 228
W KLW +P KV H WR D LPTR L K + C+ C ET H+ +C
Sbjct: 178 WKKLWKARVPGKVMHCAWRACHDLLPTRAKLVTKGYEGTLKCLSCPHPCETTAHLVCACP 237
Query: 229 FAVNCWECAALKSVV---------ESCLENAESISDFVRNLMQVADKDQVSKICVIMWNI 381
A + L V E LE A S+SD D+ K+ +I+W +
Sbjct: 238 IAQTILLGSHLNITVLMSSIFNFKEWMLEQATSLSD-----------DKFQKLLMIIWGL 286
Query: 382 WRQRNNELWDKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAWKKPTQFF 561
WR RNN LW + A + + + + E+ + ++ +++ V W P
Sbjct: 287 WRNRNNMLWSDKQQTAQEIICGTMSWYHEFTTINYPQQKPSKTSQR----VKWFPPAVDH 342
Query: 562 LKCNVDAACCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIIN 741
LK NVD A + + G+G ++RD+ G + A + G +AE +R L W+
Sbjct: 343 LKLNVDGAFMPNETEGGVGGILRDNQGIVVAAFTKHISGINSANQAELKAIRAGLIWLKT 402
Query: 742 LGMKQISVETDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDISVTFAGREGNRVAH 921
+ETD ++ V+ + D E+ I++D +LL G D+ ++FA R AH
Sbjct: 403 YNFHNCILETDCQVAVNEVQLQDYISLEYGNIIDDIHELLEGFDDVYISFAPRTAKAAAH 462
>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
gi|223541858|gb|EEF43404.1| conserved hypothetical
protein [Ricinus communis]
Length = 668
Score = 134 bits (336), Expect = 6e-29
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Frame = +1
Query: 49 WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSCN 228
W+K W + IP KV++ MW++ +C+ T NL + +D++ C C+RE ET +H+ C+
Sbjct: 428 WNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCS 487
Query: 229 FAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNELW 408
A CW+ + I +++N +D +K+ ++ ++W QRN+ +W
Sbjct: 488 MARECWDLLGFR----FSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWVW 543
Query: 409 DKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVV-AWKKPTQFFLKCNVDAA 585
+K + A + L + A+ + V W KP +LK N D A
Sbjct: 544 NKQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNTDVTRKWTKPELGWLKINTDTA 603
Query: 586 CCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIINLGMKQISV 765
+ G+G V+RD G ++ARS G + +EAEA+ ++EALS++ + M +
Sbjct: 604 LFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALSMKEALSYMKDYQMDKCFF 663
Query: 766 ETDAK 780
E DA+
Sbjct: 664 ELDAQ 668
>ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 393
Score = 131 bits (329), Expect = 4e-28
Identities = 80/291 (27%), Positives = 136/291 (46%)
Frame = +1
Query: 49 WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSCN 228
W K+W +PPKV+ F+WR+ + +PTR L+++ + C+ C E+ET H+F C
Sbjct: 51 WKKIWQANVPPKVRSFIWRLCLEVIPTRAALSRRLFITDVRCIFCGNEVETGLHLFRDCP 110
Query: 229 FAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNELW 408
+ W+ L + S +++ +V +M Q+ + +W +W +RNN +W
Sbjct: 111 VVQSFWKHNPLH--LRSYSYPGSTLAVWVFLVMDNLSMQQLEGFFMALWTVWIERNNMIW 168
Query: 409 DKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAWKKPTQFFLKCNVDAAC 588
++ A++ L E++ K K + W P LK N+D A
Sbjct: 169 RGGSCNPSNMSVWAMQLLEEYK-----KVHTKPSVKMKRPRAKWCCPPSGRLKLNIDGAY 223
Query: 589 CNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIINLGMKQISVE 768
+K GIG+V+R++ G C+ A S EA +R +L I+ G ++ +E
Sbjct: 224 LEDGRKGGIGVVVRNEYGNCVAALSRHMPYASSAMHMEAEALRASLLIAIHQGWDEVEIE 283
Query: 769 TDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDISVTFAGREGNRVAH 921
D IV+ + ++D E +IL+DCR + I + RE N VAH
Sbjct: 284 GDCAIVMKALANTDGDVIEVSSILSDCRHYMEAFRLILLRHIYREANGVAH 334
>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538337|gb|EEF39944.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 483
Score = 129 bits (324), Expect = 2e-27
Identities = 82/291 (28%), Positives = 127/291 (43%)
Frame = +1
Query: 49 WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSCN 228
W +LW + I K K FMWR + LP R NL +K+ ++ C C + ET HI + C+
Sbjct: 184 WRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHILVLCD 243
Query: 229 FAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNNELW 408
W+ L L ++ + R++ + D V+ V+ W++W N+ +W
Sbjct: 244 VTTQSWKYVNLYQF----LSQVSNLLEGARSVFEHFDDSIVASFVVLWWSLWTNMNDVVW 299
Query: 409 DKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAWKKPTQFFLKCNVDAAC 588
+ A FL +W ARK G W+KP K NVDA+
Sbjct: 300 NGKKLSWRAVASRASSFLFQWGKARKLTDYHQLGRHFAGGDCLWQKPATGKYKLNVDASS 359
Query: 589 CNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALSWIINLGMKQISVE 768
K+G V+RD+ G + I AEA ++EALSWI GM+++ +E
Sbjct: 360 SAERGKSGASFVLRDNAGIWITGVLIIRPYIANPDVAEAWALKEALSWIHAKGMEEVQIE 419
Query: 769 TDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDISVTFAGREGNRVAH 921
TD ++ + +S +L DC+ LL ++ F N VAH
Sbjct: 420 TDCLRNIELLEEELHPNSYLLCLLKDCQDLLRVLNRCNLVFVYGSANTVAH 470
>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
Length = 593
Score = 128 bits (322), Expect = 3e-27
Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 8/304 (2%)
Frame = +1
Query: 34 SGDEHWSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHI 213
+G+E W W + PP++K +WR+ + L R NL ++ I V+ C C ET H+
Sbjct: 276 AGEERWKTCWGLRCPPRIKTLLWRLIDNNLSVRTNLTRRGIQVDEVCPCCAGPSETAAHL 335
Query: 214 FLSCNFAVNCWECAALKSVVESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQR 393
F C + ++ W+ ++ VES +E+I + +L+ + D + S+ +W IWR R
Sbjct: 336 FFCCPYTLDIWKEVNVQIQVES----SENILLAIDSLLNIRDPVEQSRRAATLWIIWRVR 391
Query: 394 NNELWDKSHKPAADTVFNAVKFLVEWRAARKG-----KHAVNQGN---KQEEKVVAWKKP 549
N+ VF + +V + KG +GN + + W P
Sbjct: 392 NS------------IVFRTGEEIVICKELEKGFRFWQDFMDTEGNPTVRGAPRTSKWNAP 439
Query: 550 TQFFLKCNVDAACCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVREALS 729
T F K NVDA + + +G+V+RDD GA ++A + SF E V L
Sbjct: 440 TAGFYKINVDAG-LRAERGGQVGIVVRDDTGAFVMATTRSFPNLVHPTLLEGQAVYTGLE 498
Query: 730 WIINLGMKQISVETDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDISVTFAGREGN 909
+ LG++++ +E+D VV + S+ I++DC+ LL + + RE N
Sbjct: 499 FANALGLERVELESDCLPVVMQLSKGYTDRSDLSNIIDDCKMLLSNFQQVRIAHVRREAN 558
Query: 910 RVAH 921
+ AH
Sbjct: 559 QAAH 562
>gb|EEE57524.1| hypothetical protein OsJ_07834 [Oryza sativa Japonica Group]
Length = 408
Score = 128 bits (321), Expect = 3e-27
Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 25/316 (7%)
Frame = +1
Query: 49 WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRELETCWHIFLSCN 228
W+ +WS +PPKV+ F WRV+ DCL TR N ++++ + C +C E ET +H C
Sbjct: 63 WNTIWSCPVPPKVRIFAWRVASDCLATRVNKKGRRLEALDTCTLCGTESETAFHALCRCT 122
Query: 229 FAVNCWECAALKSV---VESCLENAESISDFVRNLMQVADKDQVSKICVIMWNIWRQRNN 399
+A W AAL+ V + + + L+++++ +++ I +++W IW RN
Sbjct: 123 YARALW--AALREVWQIPDQTTWTYQGTKWLLLTLVKLSEMERMF-ILMLLWRIWHVRNE 179
Query: 400 ELWDKSHKPAADTVFNAVKFLVEW------------RAARKGKHAV--------NQGNKQ 519
+ DK +PA V + +FLV + + KGK + QG +
Sbjct: 180 VVHDK--RPAPIEV--SKRFLVSYVDSLLGIRQHPTKDIHKGKGVICYQLRNSSRQGGSE 235
Query: 520 EEKVV--AWKKPTQFFLKCNVDAACCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVK 693
+ AW +P + K NVD + NSS + GIGM++R+ G + +
Sbjct: 236 RSQGTDEAWVRPPPGWSKLNVDGSFNNSSGQAGIGMILRNSEGEAIFTGRQAIANCVDAL 295
Query: 694 EAEAIGVREALSWIINLGMKQISVETDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEP 873
E+E + + L ++ + I +ETD+ + V I + S F ++ + R L GE
Sbjct: 296 ESELLACKFGLDLALHWSILPIILETDSILAVSAINGKTEDKSRFAYLIRELRLLQKGER 355
Query: 874 DISVTFAGREGNRVAH 921
++ V R+ N+++H
Sbjct: 356 EVKVQKVHRDHNKISH 371
>ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 888
Score = 127 bits (318), Expect = 8e-27
Identities = 92/307 (29%), Positives = 137/307 (44%), Gaps = 7/307 (2%)
Frame = +1
Query: 22 ADQRSGDEH---WSKLWSILIPPKVKHFMWRVSRDCLPTRCNLAKKKIDVENCCMICHRE 192
A SGD W KLW IP KV WR + LPTR L K C+ C
Sbjct: 558 ASSSSGDPFEPLWKKLWQSKIPGKVLICAWRACNNILPTRARLTIKGYTGPVKCVSCPHW 617
Query: 193 LETCWHIFLSCNFAVNCWECAALK-SVVESCLENAESISDFVRNLMQVA---DKDQVSKI 360
E HI +C A + LK S + S I DF +++ A ++ +K+
Sbjct: 618 YEDIAHIMCACPLAKDILSRGPLKLSAIWS------PIFDFKEWMLEQALSLSTEKFAKL 671
Query: 361 CVIMWNIWRQRNNELWDKSHKPAADTVFNAVKFLVEWRAARKGKHAVNQGNKQEEKVVAW 540
+++W +WR RNN W + + AAD + + + E+ A K V + N+Q W
Sbjct: 672 LMVIWGLWRNRNNTFWSQKPQFAADILCGTMAWYYEFVEATKP--LVPKKNQQTRP--RW 727
Query: 541 KKPTQFFLKCNVDAACCNSSKKTGIGMVIRDDMGACLVARSISFQGNYQVKEAEAIGVRE 720
P LK NVD A +++ GIG ++R+ G + A + K+ E +R
Sbjct: 728 SPPAVGVLKLNVDGAFLHNNTDGGIGGILRNSHGHAIAAFAYHLTNVTSPKQVELEAIRT 787
Query: 721 ALSWIINLGMKQISVETDAKIVVDGIYSSDKGDSEFDTILNDCRKLLVGEPDISVTFAGR 900
L W+ LG ++TD ++VV I ++D E+ IL D L ++ +TFA R
Sbjct: 788 GLQWMHKLGYHDYEIQTDCQLVVQDIVATDFLLMEYGNILADIHVALNRMRNVKITFAAR 847
Query: 901 EGNRVAH 921
N VAH
Sbjct: 848 TTNCVAH 854