BLASTX nr result

ID: Rehmannia25_contig00026384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00026384
         (365 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348624.1| PREDICTED: transcription initiation factor T...    73   4e-11
ref|XP_004239004.1| PREDICTED: uncharacterized protein LOC101252...    72   6e-11
ref|XP_004239262.1| PREDICTED: uncharacterized protein LOC101263...    72   8e-11
gb|EOY32429.1| Transcription initiation factor TFIID subunit 11 ...    61   2e-07
gb|EOY32428.1| Transcription initiation factor TFIID subunit 11 ...    61   2e-07
gb|EOY32427.1| Transcription initiation factor TFIID subunit 11 ...    61   2e-07
gb|EMJ13178.1| hypothetical protein PRUPE_ppa010895mg [Prunus pe...    60   4e-07
ref|XP_002277017.1| PREDICTED: transcription initiation factor T...    58   1e-06
ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207...    56   6e-06

>ref|XP_006348624.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
           isoform X1 [Solanum tuberosum]
           gi|565363815|ref|XP_006348625.1| PREDICTED:
           transcription initiation factor TFIID subunit 11-like
           isoform X2 [Solanum tuberosum]
           gi|565363817|ref|XP_006348626.1| PREDICTED:
           transcription initiation factor TFIID subunit 11-like
           isoform X3 [Solanum tuberosum]
          Length = 210

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
 Frame = -3

Query: 285 MKKSKDPFEIAFEEQEESPPDSPVGLDENEAEPVTIV----SEDTELNANVVATGPSTPA 118
           MK+SKDPFE  FEEQ++SPP+SP G DENE +    V    +E  ++N +     PST  
Sbjct: 1   MKRSKDPFEATFEEQDDSPPESPAGTDENEGQDQGAVGVNMNESDDVNTD-SREKPSTSK 59

Query: 117 SVSVLVGTSAGPIGRNKXXXXXXXXEIMNVELGKLRAS 4
           + SV V T AGPI + K        E M+V+LGKL +S
Sbjct: 60  ATSVSVST-AGPISKPKEEDEEEEEESMDVQLGKLSSS 96


>ref|XP_004239004.1| PREDICTED: uncharacterized protein LOC101252686 [Solanum
           lycopersicum]
          Length = 210

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
 Frame = -3

Query: 285 MKKSKDPFEIAFEEQEESPPDSPVGLDENEAEPVTIV----SEDTELNANVVATGPSTPA 118
           MK+SKDPFE  FEEQ++SPP+SP G DENE +    V    +E  ++N +     PST  
Sbjct: 1   MKRSKDPFEATFEEQDDSPPESPAGTDENEGQDQGAVGVNMNEGDDVNTD-SREKPSTSK 59

Query: 117 SVSVLVGTSAGPIGRNKXXXXXXXXEIMNVELGKLRAS 4
           + SV V T AGPI + K        E M+V+LGKL +S
Sbjct: 60  ATSVSVST-AGPISKPKEEDEEEEEESMDVQLGKLSSS 96


>ref|XP_004239262.1| PREDICTED: uncharacterized protein LOC101263908 [Solanum
           lycopersicum]
          Length = 210

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
 Frame = -3

Query: 285 MKKSKDPFEIAFEEQEESPPDSPVGLDENEAEPVTIV----SEDTELNANVVATGPSTPA 118
           MK+SKDPFE  FEEQ++SPP+SP G DENE +    V    +E  ++N +     PST  
Sbjct: 1   MKRSKDPFEATFEEQDDSPPESPAGTDENEGQDHGAVGVNMNEGDDVNTD-SREKPSTSK 59

Query: 117 SVSVLVGTSAGPIGRNKXXXXXXXXEIMNVELGKLRAS 4
           + SV V T AGPI + K        E M+V+LGKL +S
Sbjct: 60  ATSVSVST-AGPISKPKEEDEEEEEESMDVQLGKLSSS 96


>gb|EOY32429.1| Transcription initiation factor TFIID subunit 11 isoform 3, partial
           [Theobroma cacao]
          Length = 174

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
 Frame = -3

Query: 285 MKKSKDPFEIAFEEQEESPPDSPVGLDENEAEPV--------TIVSEDTELNANVVATGP 130
           MK+SKDPFE A EEQEESPPDSP+G DE +++          T+V +D           P
Sbjct: 1   MKQSKDPFEAALEEQEESPPDSPIGQDELDSQTQNQTPTGHHTLVDDDDYDEIGTNTNNP 60

Query: 129 STPASVSVLV---------GTSAGPIGRNKXXXXXXXXEIMNVELGKLRAS 4
           S P+S S  +           SA    +NK        E ++VELGK  +S
Sbjct: 61  SHPSSNSTPMLLTPSVNANVASAAAASKNKEYDDDEEEENVDVELGKFPSS 111


>gb|EOY32428.1| Transcription initiation factor TFIID subunit 11 isoform 2
           [Theobroma cacao]
          Length = 191

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
 Frame = -3

Query: 285 MKKSKDPFEIAFEEQEESPPDSPVGLDENEAEPV--------TIVSEDTELNANVVATGP 130
           MK+SKDPFE A EEQEESPPDSP+G DE +++          T+V +D           P
Sbjct: 1   MKQSKDPFEAALEEQEESPPDSPIGQDELDSQTQNQTPTGHHTLVDDDDYDEIGTNTNNP 60

Query: 129 STPASVSVLV---------GTSAGPIGRNKXXXXXXXXEIMNVELGKLRAS 4
           S P+S S  +           SA    +NK        E ++VELGK  +S
Sbjct: 61  SHPSSNSTPMLLTPSVNANVASAAAASKNKEYDDDEEEENVDVELGKFPSS 111


>gb|EOY32427.1| Transcription initiation factor TFIID subunit 11 isoform 1
           [Theobroma cacao]
          Length = 225

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
 Frame = -3

Query: 285 MKKSKDPFEIAFEEQEESPPDSPVGLDENEAEPV--------TIVSEDTELNANVVATGP 130
           MK+SKDPFE A EEQEESPPDSP+G DE +++          T+V +D           P
Sbjct: 1   MKQSKDPFEAALEEQEESPPDSPIGQDELDSQTQNQTPTGHHTLVDDDDYDEIGTNTNNP 60

Query: 129 STPASVSVLV---------GTSAGPIGRNKXXXXXXXXEIMNVELGKLRAS 4
           S P+S S  +           SA    +NK        E ++VELGK  +S
Sbjct: 61  SHPSSNSTPMLLTPSVNANVASAAAASKNKEYDDDEEEENVDVELGKFPSS 111


>gb|EMJ13178.1| hypothetical protein PRUPE_ppa010895mg [Prunus persica]
          Length = 231

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 45/118 (38%), Positives = 54/118 (45%), Gaps = 23/118 (19%)
 Frame = -3

Query: 285 MKKSKDPFEIAFEEQEESPPDSPVGLDENEAEPVTIVSED---------------TELNA 151
           M +SKDPFE AFEEQE+SPPDSP   D     P T   +D               T L A
Sbjct: 1   MDQSKDPFEAAFEEQEDSPPDSPAAPDAARTAPDTQEDDDPLLLPPGSKDPSSSATPLAA 60

Query: 150 -------NVVATGPSTPASVSVLVGTSA-GPIGRNKXXXXXXXXEIMNVELGKLRASG 1
                    V T  +TPA+ +    TSA   +  NK        E M+VELGK  A+G
Sbjct: 61  PPPPPPTTAVTTARTTPAATTAAPSTSARAVVKHNKDDDDDEDEENMDVELGKFSATG 118


>ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
           vinifera] gi|296086768|emb|CBI32917.3| unnamed protein
           product [Vitis vinifera]
          Length = 198

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 42/95 (44%), Positives = 52/95 (54%)
 Frame = -3

Query: 285 MKKSKDPFEIAFEEQEESPPDSPVGLDENEAEPVTIVSEDTELNANVVATGPSTPASVSV 106
           MK+SKDPFE+AFE  E SPPDSPV       E +     + E +ANV     STP S + 
Sbjct: 1   MKQSKDPFEVAFE--ESSPPDSPV-------EEIVGGQIEDEDDANVNVHPTSTP-SAAP 50

Query: 105 LVGTSAGPIGRNKXXXXXXXXEIMNVELGKLRASG 1
             GT+  P  ++K        E M+VELGKL  SG
Sbjct: 51  SSGTTVPPTAKSKDEDEEEEEENMDVELGKLPTSG 85


>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
           gi|449494264|ref|XP_004159496.1| PREDICTED:
           uncharacterized protein LOC101229675 [Cucumis sativus]
          Length = 220

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
 Frame = -3

Query: 285 MKKSKDPFEIAFEEQEESPPDSPVGLDENE---------AEPVTIVSEDTELNANVVATG 133
           MK+SKDPFE AFEEQEESPP+SP   D+ E         A+   +   D +  +  VAT 
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60

Query: 132 PSTPASVSVLVGTSAGPIG---RNKXXXXXXXXEIMNVELGKLRASG 1
              PAS + +  +S+  +    + K        E + VEL K  +SG
Sbjct: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSG 107


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