BLASTX nr result
ID: Rehmannia25_contig00026330
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00026330
(332 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 160 2e-37
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 139 3e-31
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 138 9e-31
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 137 1e-30
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 137 1e-30
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 137 1e-30
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 137 1e-30
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 137 1e-30
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 136 3e-30
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 136 3e-30
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 136 3e-30
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 135 4e-30
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 135 4e-30
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera] 135 4e-30
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 135 4e-30
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 135 7e-30
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 134 1e-29
emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa Japonica Group] 133 2e-29
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 132 4e-29
gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subc... 132 6e-29
>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 867
Score = 160 bits (405), Expect = 2e-37
Identities = 75/99 (75%), Positives = 86/99 (86%)
Frame = +2
Query: 29 YTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVRHFTVR 208
+TMK K++VL IFLKWK +ENQT RKIKVLRTDNGGEY SDPF +VC GI+RHFT+R
Sbjct: 506 FTMKNKNDVLEIFLKWKDEVENQTGRKIKVLRTDNGGEYKSDPFLKVCQDCGIIRHFTIR 565
Query: 209 RTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
+TPQQNGV+ERMN+ LVEKVRCMLSNA LGR+ WAEAVT
Sbjct: 566 KTPQQNGVSERMNKILVEKVRCMLSNAELGRKFWAEAVT 604
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 139 bits (351), Expect = 3e-31
Identities = 62/102 (60%), Positives = 77/102 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K KD+ F +WK RIE QT +++KVLRTDNGGE+ SD F + C K GIVR
Sbjct: 516 RKVWPYFLKHKDDTFAAFKEWKVRIERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVR 575
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEA 319
H T+ TPQQNGVAERMNRT++ K RCMLSNA + ++ WAEA
Sbjct: 576 HHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEA 617
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 138 bits (347), Expect = 9e-31
Identities = 62/104 (59%), Positives = 78/104 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K K + +F +WKT +E QT RK+K+LRTDNG E+ S F+ C GIVR
Sbjct: 489 RKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVR 548
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H+T+ TPQQNGVAERMNRT++ K RCMLSNAGL +Q WAEAV+
Sbjct: 549 HYTIPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVS 592
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 137 bits (346), Expect = 1e-30
Identities = 62/104 (59%), Positives = 78/104 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K K + +F +WKT +E QT RK+K+LRTDNG E+ S F+ C GI+R
Sbjct: 340 RKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMR 399
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H+TV TPQQNGVAERMNRT++ K RCMLSNAGL +Q WAEAV+
Sbjct: 400 HYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVS 443
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 137 bits (346), Expect = 1e-30
Identities = 62/104 (59%), Positives = 78/104 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K K + +F +WKT +E QT RK+K+LRTDNG E+ S F+ C GI+R
Sbjct: 508 RKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMR 567
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H+TV TPQQNGVAERMNRT++ K RCMLSNAGL +Q WAEAV+
Sbjct: 568 HYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVS 611
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 137 bits (345), Expect = 1e-30
Identities = 62/104 (59%), Positives = 78/104 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K K + +F +WKT +E QT RK+K+LRTDNG E+ S F+ C GIVR
Sbjct: 730 RKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVR 789
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H+TV TPQQNGVAERMNRT++ K RC+LSNAGL +Q WAEAV+
Sbjct: 790 HYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVS 833
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 137 bits (345), Expect = 1e-30
Identities = 62/104 (59%), Positives = 78/104 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K K + +F +WKT +E QT RK+K+LRTDNG ++ S F+ C GIVR
Sbjct: 484 RKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGIVR 543
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H+TV TPQQNGVAERMNRT++ K RCMLSNAGL +Q WAEAV+
Sbjct: 544 HYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVS 587
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 137 bits (345), Expect = 1e-30
Identities = 62/104 (59%), Positives = 78/104 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K K + +F +WKT +E QT RK+K+LRTDNG E+ S F+ C GIVR
Sbjct: 523 RKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVR 582
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H+TV TPQQNGVAERMNRT++ K RC+LSNAGL +Q WAEAV+
Sbjct: 583 HYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVS 626
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 136 bits (343), Expect = 3e-30
Identities = 63/104 (60%), Positives = 76/104 (73%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K K E +F +WKT +E QT RK+KVLRTDNG E+ S F+ C GIVR
Sbjct: 462 RKVWPYFLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFKSYCRSEGIVR 521
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H+TV TPQQNGV ERMNRT++ K RCMLSNAGL R+ WAEA +
Sbjct: 522 HYTVSHTPQQNGVVERMNRTIISKARCMLSNAGLPRRFWAEAAS 565
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 136 bits (343), Expect = 3e-30
Identities = 62/104 (59%), Positives = 77/104 (74%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K K + +F +WKT +E QT RK+K+LRTDNG E+ S F+ C GIVR
Sbjct: 523 RKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVR 582
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H+TV TPQQNGVAERMNR ++ K RCMLSNAGL +Q WAEAV+
Sbjct: 583 HYTVPHTPQQNGVAERMNRIIISKARCMLSNAGLPKQFWAEAVS 626
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 136 bits (342), Expect = 3e-30
Identities = 62/104 (59%), Positives = 77/104 (74%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K K + +F +WKT +E QT RK+K+LR DNG E+ S F+ C GIVR
Sbjct: 344 RKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRPDNGMEFCSKIFKSYCKSEGIVR 403
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H+TV TPQQNGVAERMNRT++ K RCMLSNAGL +Q WAEAV+
Sbjct: 404 HYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQFWAEAVS 447
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 135 bits (341), Expect = 4e-30
Identities = 60/104 (57%), Positives = 78/104 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
RR W+Y ++TKDE F++WKT+IENQ +K+K+L TDNG E+ + F C K G++R
Sbjct: 516 RRTWIYFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQEFDSFCRKEGVIR 575
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H T TPQQNGVAERMNRT++ KVRCMLS +GLG+Q WAEA +
Sbjct: 576 HRTCAYTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAAS 619
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 135 bits (341), Expect = 4e-30
Identities = 63/103 (61%), Positives = 78/103 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VWVY +K KDEV G F +WKT +E +T + +K LRTDNG E+ + F E C K GIVR
Sbjct: 622 RKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVR 681
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAV 322
H TVR TPQQNGVAERMN+TLV++ RCM +AGL ++ WAEAV
Sbjct: 682 HRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAV 724
>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 135 bits (341), Expect = 4e-30
Identities = 63/103 (61%), Positives = 78/103 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VWVY +K KDEV G F +WKT +E +T + +K LRTDNG E+ + F E C K GIVR
Sbjct: 477 RKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVR 536
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAV 322
H TVR TPQQNGVAERMN+TLV++ RCM +AGL ++ WAEAV
Sbjct: 537 HRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAV 579
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 135 bits (341), Expect = 4e-30
Identities = 63/103 (61%), Positives = 78/103 (75%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VWVY +K KDEV G F +WKT +E +T + +K LRTDNG E+ + F E C K GIVR
Sbjct: 835 RKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFDEFCRKEGIVR 894
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAV 322
H TVR TPQQNGVAERMN+TLV++ RCM +AGL ++ WAEAV
Sbjct: 895 HRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAV 937
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 135 bits (339), Expect = 7e-30
Identities = 60/102 (58%), Positives = 75/102 (73%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K KD+ F +WK IE QT +++KVLRTDN GE+ SD F + C K GIVR
Sbjct: 516 RKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVR 575
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEA 319
H T+ TPQQNGVAERMNRT++ K RCMLSNA + ++ WAEA
Sbjct: 576 HHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRFWAEA 617
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 134 bits (338), Expect = 1e-29
Identities = 62/104 (59%), Positives = 76/104 (73%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K K + +F +WKT +E QT RK+K+LRTDNG E S F+ C GIVR
Sbjct: 432 RKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVR 491
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEAVT 325
H+TV TPQQNGVAERMNRT++ K RCMLSNA L +Q WAEAV+
Sbjct: 492 HYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQFWAEAVS 535
>emb|CAE02229.2| OSJNBb0015C06.7 [Oryza sativa Japonica Group]
Length = 977
Score = 133 bits (335), Expect = 2e-29
Identities = 59/102 (57%), Positives = 76/102 (74%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K KD+ F +WK IE QT++++KVLRTDNGGE+ D F + C K G+VR
Sbjct: 337 RKVWPYFLKHKDDTFVAFKEWKVTIERQTKKEVKVLRTDNGGEFCLDAFHDYCRKEGMVR 396
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEA 319
H T+ TPQQNGVAERMNRT++ K RCMLSNA + ++ WAEA
Sbjct: 397 HHTISCTPQQNGVAERMNRTIISKARCMLSNAHMNKRFWAEA 438
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 132 bits (333), Expect = 4e-29
Identities = 59/102 (57%), Positives = 75/102 (73%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K KD+ F +WK IE QT +++KVLRTDNGGE+ SD F + K GIVR
Sbjct: 253 RKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNGGEFCSDAFDDYYRKEGIVR 312
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAEA 319
H+T+ TPQQNGVAERMNRT++ K CMLSNA + ++ WAEA
Sbjct: 313 HYTIPYTPQQNGVAERMNRTIISKAHCMLSNARMNKRFWAEA 354
>gb|ABA96191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 132 bits (331), Expect = 6e-29
Identities = 58/101 (57%), Positives = 74/101 (73%)
Frame = +2
Query: 14 RRVWVYTMKTKDEVLGIFLKWKTRIENQTRRKIKVLRTDNGGEYTSDPFQEVCHKYGIVR 193
R+VW Y +K KD+ F +WK IE QT +++KVLRTD+GGE+ SD F + C K GIVR
Sbjct: 456 RKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDSGGEFCSDAFDDYCRKEGIVR 515
Query: 194 HFTVRRTPQQNGVAERMNRTLVEKVRCMLSNAGLGRQHWAE 316
H T+ TPQQNGVAERMNRT++ RCMLSNA + ++ WAE
Sbjct: 516 HHTIPYTPQQNGVAERMNRTIISNTRCMLSNARMNKRFWAE 556