BLASTX nr result
ID: Rehmannia25_contig00026182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00026182
(446 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 209 4e-52
gb|ABW74566.1| integrase [Boechera divaricarpa] 203 2e-50
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus] 202 5e-50
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle... 201 1e-49
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 201 1e-49
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 201 1e-49
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle... 200 2e-49
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle... 200 2e-49
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle... 200 2e-49
gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense] 199 3e-49
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana] 199 3e-49
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 199 3e-49
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 199 3e-49
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 199 3e-49
gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus] 199 4e-49
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle... 199 4e-49
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle... 199 4e-49
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle... 198 5e-49
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle... 198 7e-49
gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis c... 197 9e-49
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 209 bits (531), Expect = 4e-52
Identities = 97/148 (65%), Positives = 123/148 (83%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
Q DVKSAFLNGDLEEEVYV QP+ ++ G E+KVY+LRKALYGLKQAPRAW SKID +FQ
Sbjct: 925 QFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQ 984
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+GF+RS +EP+LY+KK G +FL++CLYVDD+IY G++ +LV +FK MM+ +EM+DLG
Sbjct: 985 GSGFRRSDNEPTLYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLG 1044
Query: 361 LMKYFLGIQVRQSKGEIFISQEKYLEAL 444
L+KYFLG++V Q K IFISQ+KY E L
Sbjct: 1045 LLKYFLGLEVIQDKDGIFISQKKYAEDL 1072
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 203 bits (516), Expect = 2e-50
Identities = 93/144 (64%), Positives = 120/144 (83%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
Q DVKSAFLNG+L EEVYV+QPE +I G E VYRL KALYGLKQAPRAW +KID YF
Sbjct: 756 QFDVKSAFLNGELREEVYVDQPEGFIVEGREGFVYRLYKALYGLKQAPRAWYNKIDSYFA 815
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+TGF+RS+SEP+LY+KK GA D L++CLYVDD+IY G++ +LV EFK +MM+++EMTDLG
Sbjct: 816 ETGFERSKSEPTLYIKKQGAGDILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLG 875
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
L+ +FLG++V+Q + +F+SQ KY
Sbjct: 876 LLYFFLGLEVKQVEDGVFVSQHKY 899
>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 202 bits (513), Expect = 5e-50
Identities = 96/144 (66%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+KALYGLKQAPRAWN++IDKYF
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFN 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ GF + E +LY+K D LI CLYVDDLI+TG NP + ++FKK M KE+EMTD+G
Sbjct: 165 EKGFIKCPYEHALYIKTQN-NDILIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q + IFI+QE Y
Sbjct: 224 LMSYYLGIEVKQEENGIFITQEGY 247
>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 201 bits (510), Expect = 1e-49
Identities = 96/144 (66%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+KALYGLKQAPRAWN++IDKYF+
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 165 EKDFIKCPYEHALYI-KIQKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 224 LMSYYLGIEVKQEDNRIFITQEGY 247
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 201 bits (510), Expect = 1e-49
Identities = 96/144 (66%), Positives = 117/144 (81%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+KALYGLKQAPRAWN++IDKYF+
Sbjct: 944 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 1003
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K +D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 1004 EKDFIKCPYEHALYI-KIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 1062
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 1063 LMSYYLGIEVKQEDNGIFITQEGY 1086
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 201 bits (510), Expect = 1e-49
Identities = 96/144 (66%), Positives = 117/144 (81%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+KALYGLKQAPRAWN++IDKYF+
Sbjct: 912 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 971
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K +D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 972 EKDFIKCPYEHALYI-KIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 1030
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 1031 LMSYYLGIEVKQEDNGIFITQEGY 1054
>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 200 bits (508), Expect = 2e-49
Identities = 96/144 (66%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+KALYGLKQAPRAWN++IDKYF+
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 165 EKDFIKCPYEHALYI-KIQKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 224 LMSYYLGIEVKQEDNGIFITQEGY 247
>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 200 bits (508), Expect = 2e-49
Identities = 96/144 (66%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+KALYGLKQAPRAWN++IDKYF+
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 165 EKDFIKCPYEHALYI-KIQKDDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 224 LMSYYLGIEVKQEDNGIFITQEGY 247
>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera] gi|389595484|gb|AFK88545.1| reverse
transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 200 bits (508), Expect = 2e-49
Identities = 96/144 (66%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+KALYGLKQAPRAWN++IDKYF+
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 165 EKDFIKCPYEHALYI-KIQKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 224 LMSYYLGIEVKQEDNGIFITQEGY 247
>gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]
Length = 315
Score = 199 bits (506), Expect = 3e-49
Identities = 95/144 (65%), Positives = 117/144 (81%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI G+EDKV RL+KALYGLKQAPRAWN++IDKYF+
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGKEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+K + LI CLYVDDLI+TG+NP++ +EFKK M KE+EMTD+G
Sbjct: 165 EKSFIKCPYEHALYIKTQN-NNILIACLYVDDLIFTGSNPSMFEEFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFISQE Y
Sbjct: 224 LMSYYLGIEVKQEDNGIFISQEGY 247
>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 623
Score = 199 bits (506), Expect = 3e-49
Identities = 95/144 (65%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+K LYGLKQAPRAWN++IDKYF+
Sbjct: 441 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFK 500
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K +D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 501 EKDFIKCPYEHALYI-KIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 559
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 560 LMSYYLGIEVKQEDNGIFITQEGY 583
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 199 bits (506), Expect = 3e-49
Identities = 95/144 (65%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+K LYGLKQAPRAWN++IDKYF+
Sbjct: 944 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFK 1003
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K +D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 1004 EKDFIKCPYEHALYI-KIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIG 1062
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 1063 LMSYYLGIEVKQEDNGIFITQEGY 1086
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 199 bits (506), Expect = 3e-49
Identities = 95/144 (65%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+K LYGLKQAPRAWN++IDKYF+
Sbjct: 944 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFK 1003
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K +D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 1004 EKDFIKCPYEHALYI-KIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 1062
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 1063 LMSYYLGIEVKQEDNGIFITQEGY 1086
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 199 bits (506), Expect = 3e-49
Identities = 95/144 (65%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+K LYGLKQAPRAWN++IDKYF+
Sbjct: 944 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFK 1003
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K +D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 1004 EKDFIKCPYEHALYI-KIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIG 1062
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 1063 LMSYYLGIEVKQEDNGIFITQEGY 1086
>gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 199 bits (505), Expect = 4e-49
Identities = 95/144 (65%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+KAL GLKQAPRAWN++IDKYF+
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALNGLKQAPRAWNTRIDKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ GF + E +LY+K D LI CLYVDDLI+TG NP + ++FKK M KE+EMTD+G
Sbjct: 165 EKGFIKCPYEHALYIKTQN-NDILIACLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q + IFI+QE Y
Sbjct: 224 LMSYYLGIEVKQEENGIFITQEGY 247
>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 199 bits (505), Expect = 4e-49
Identities = 96/144 (66%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+KALYGLKQAPRAWN++I+KYF+
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRINKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 165 KKDFIKCPYEHALYI-KIQKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFISQE Y
Sbjct: 224 LMSYYLGIEVKQEDNGIFISQEGY 247
>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 199 bits (505), Expect = 4e-49
Identities = 95/144 (65%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEEDKV RL+KALYGLKQAPR+WN++IDKYF+
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRSWNTRIDKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 165 EKDFIKCPYEHALYI-KIQKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 224 LMSYYLGIEVKQEDNGIFITQEGY 247
>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 198 bits (504), Expect = 5e-49
Identities = 95/144 (65%), Positives = 115/144 (79%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKS FLNGDLEEEVY+EQP+ YI GEEDKV RL+KALYGLKQAPRAWN++IDKYF+
Sbjct: 105 QMDVKSTFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 165 EKDFIKCPYEHALYI-KIQKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 224 LMSYYLGIEVKQEDNGIFITQEGY 247
>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 198 bits (503), Expect = 7e-49
Identities = 95/144 (65%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEE+KV RL+KALYGLKQAPRAWN++IDKYF+
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEENKVLRLKKALYGLKQAPRAWNTRIDKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 165 EKDFIKCPYEHALYI-KIQKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q IFI+QE Y
Sbjct: 224 LMSYYLGIEVKQEDNGIFITQEGY 247
>gb|AGH20678.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 315
Score = 197 bits (502), Expect = 9e-49
Identities = 95/144 (65%), Positives = 116/144 (80%)
Frame = +1
Query: 1 QMDVKSAFLNGDLEEEVYVEQPEDYIANGEEDKVYRLRKALYGLKQAPRAWNSKIDKYFQ 180
QMDVKSAFLNGDLEEEVY+EQP+ YI GEE KV +L+KALYGLKQAPRAWN++IDKYF+
Sbjct: 105 QMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEAKVLKLKKALYGLKQAPRAWNTRIDKYFK 164
Query: 181 QTGFQRSQSEPSLYVKKYGAQDFLIICLYVDDLIYTGTNPALVQEFKKAMMKEYEMTDLG 360
+ F + E +LY+ K D LI CLYVDDLI+TG NP++ +EFKK M KE+EMTD+G
Sbjct: 165 EKDFIKCPYEHALYI-KIQKDDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIG 223
Query: 361 LMKYFLGIQVRQSKGEIFISQEKY 432
LM Y+LGI+V+Q EIFI+QE Y
Sbjct: 224 LMYYYLGIEVKQEDNEIFITQEGY 247