BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00025790
         (475 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346424.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_004230786.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
ref|WP_008715881.1| TM2 domain protein [Rhodococcus sp. AW25M09]...    60   3e-07
ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|WP_021866487.1| hypothetical protein [Eubacterium sp. CAG:86...    59   9e-07
emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]    59   9e-07

>ref|XP_006346424.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15690-like isoform X1 [Solanum tuberosum]
           gi|565359241|ref|XP_006346425.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15690-like isoform X2 [Solanum tuberosum]
           gi|565359243|ref|XP_006346426.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15690-like isoform X3 [Solanum tuberosum]
           gi|565359245|ref|XP_006346427.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g15690-like isoform X4 [Solanum tuberosum]
          Length = 636

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 45/100 (45%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
 Frame = +3

Query: 27  SHRNSNFQNQGYSSGYANSGVNQGYPNQGGLNSGQGDLQGGMN-PSPNFPNQGF------ 185
           ++ N+N  N  Y        VNQGYPN G +N GQG  Q   N  SPN  NQ        
Sbjct: 91  NYPNNNQMNMSYPQYQTPDQVNQGYPNYGNVNPGQGYTQSFQNQKSPNVQNQSIPYRPSS 150

Query: 186 RQNQNYPPPRGNVNQWSNNQNQGYGRNPTPNLDRNYPPQG 305
            + +NYPPP GNVNQW N QNQG+ ++ TPN   +YP  G
Sbjct: 151 GEPRNYPPP-GNVNQW-NYQNQGFRQHGTPNAAPSYPQSG 188


>ref|XP_004230786.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15690-like [Solanum lycopersicum]
          Length = 636

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 46/102 (45%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
 Frame = +3

Query: 27  SHRNSNFQNQGYSSGYANSGVNQGYPNQGGLNSGQGDLQGGMN-PSPNFPNQGF------ 185
           ++ N+N  N  Y      + VNQGYPN G +N  QG  Q   N  SPN  NQ        
Sbjct: 91  NYPNNNQMNMSYPQYQTTNQVNQGYPNYGNVNPVQGYSQSFQNQKSPNVQNQSIPYRPSS 150

Query: 186 RQNQNYPPPRGNVNQWSNNQNQGYGRNPTPNLDRNYPPQGGF 311
            + +NYPPP GNVNQW N QNQG+ ++ TPN   +Y PQGG+
Sbjct: 151 GEPRNYPPP-GNVNQW-NYQNQGFRQHGTPNAAPSY-PQGGY 189


>ref|WP_008715881.1| TM2 domain protein [Rhodococcus sp. AW25M09]
           gi|443414686|emb|CCQ16258.1| TM2 domain protein
           [Rhodococcus sp. AW25M09]
          Length = 305

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
 Frame = +3

Query: 21  PSSHRNSNFQNQGY-SSGYANSGV-NQGYPNQGGLNSGQGDLQGGMNPSPNFPNQGFRQN 194
           P+ ++   +Q Q Y   GY   G   QGYP QG    G G  QG       +P QG+ Q 
Sbjct: 106 PAGYQTQGYQQQSYPQQGYPQQGYPQQGYPQQGYPQQGYGQQQG-YGQQQGYPQQGYGQQ 164

Query: 195 QNYPPPRGNVNQWSNNQNQGYGRNPTPNLDRNYP 296
           QN+ P +G   Q +  Q QGYG+       + YP
Sbjct: 165 QNFGPQQGYGQQQNFGQQQGYGQQQNFGQPQGYP 198


>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
           [Vitis vinifera]
          Length = 593

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 45/133 (33%), Positives = 57/133 (42%), Gaps = 34/133 (25%)
 Frame = +3

Query: 9   DIGNPSSHRNSNFQNQGYSSGYANSGVNQGYPNQGGLNSGQG----------DLQGGMNP 158
           D  NPS + NS  Q+Q Y         NQ YPN+G  N GQG          + Q    P
Sbjct: 62  DQRNPSYNWNSQTQSQSYPQHMNYGDQNQSYPNRGYPNQGQGYPQHENPNQWNRQTPTYP 121

Query: 159 SPNFPNQGFRQNQNYP-----------PPRGNVNQWS---------NNQNQGY----GRN 266
            P  P++   QNQ YP           P + + NQW+         NNQNQ Y     RN
Sbjct: 122 QPQNPSRPNHQNQYYPPTGNPSLGQGYPQQRSPNQWNPQHQNPSHLNNQNQNYPQPGSRN 181

Query: 267 PTPNLDRNYPPQG 305
              N +++YP QG
Sbjct: 182 LPSNQNQSYPHQG 194


>ref|WP_021866487.1| hypothetical protein [Eubacterium sp. CAG:86]
           gi|523998536|emb|CCX81768.1| unknown [Eubacterium sp.
           CAG:86]
          Length = 288

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
 Frame = +3

Query: 3   NNDIGNPSSHRNSNFQNQGYSSGYA--------NSGVNQGYPNQGGLNSGQGDLQGGMNP 158
           NN+ GN  ++  +N  N GY++GY         N+G N GY N  G N+G  +  G    
Sbjct: 82  NNNYGNGYNNYYNNNGNSGYNNGYNSYGNNNGYNNGYNNGYSNNNGYNNGYNNGYGN--- 138

Query: 159 SPNFPNQGFRQNQNYPPPRGNVNQWSNNQNQGYGRNPTPNLDRNYPPQ 302
                N G+    +Y     N N ++N  N GYG N   N +  Y  Q
Sbjct: 139 -----NNGYNNGNSYNNGYNNGNSYNNGYNSGYGNNGYNNYNNQYGNQ 181


>emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
          Length = 627

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 37/95 (38%), Positives = 45/95 (47%)
 Frame = +3

Query: 18  NPSSHRNSNFQNQGYSSGYANSGVNQGYPNQGGLNSGQGDLQGGMNPSPNFPNQGFRQNQ 197
           NP+ + NS  Q+Q Y         NQ YPN+G  N GQG  Q G       PNQ  RQ  
Sbjct: 99  NPNYNWNSQTQSQSYPQHMNYGEQNQSYPNRGYPNQGQGYPQHGS------PNQWNRQTP 152

Query: 198 NYPPPRGNVNQWSNNQNQGYGRNPTPNLDRNYPPQ 302
            YP P+       N+QNQ Y     P+L + YP Q
Sbjct: 153 TYPQPQNPSR--PNHQNQYYPPTGNPSLGQGYPQQ 185