BLASTX nr result
ID: Rehmannia25_contig00025511
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia25_contig00025511 (591 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus] 78 2e-12 gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus] 78 2e-12 gb|AEA39176.1| polyprotein [Dahlia mosaic virus] 78 2e-12 gb|ADZ44590.1| polyprotein [Dahlia mosaic virus] 77 3e-12 gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10] 76 6e-12 gb|ABW80581.1| polyprotein [Dahlia mosaic virus] 75 1e-11 ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] g... 74 2e-11 gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus] 74 3e-11 gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland] 74 3e-11 emb|CCG14716.1| ORF V protein [Strawberry vein banding virus] 72 8e-11 ref|NP_043933.1| hypothetical protein [Strawberry vein banding v... 72 1e-10 ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic prote... 70 3e-10 gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus] 69 9e-10 gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus] 69 9e-10 gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus] 69 1e-09 gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus] 69 1e-09 ref|NP_395469.1| putative reverse transcriptase [Blueberry red r... 68 2e-09 ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus]... 68 2e-09 ref|YP_001931967.1| replicase [Eupatorium vein clearing virus] g... 68 2e-09 gb|AGT42189.1| reverse transcriptase [Cauliflower mosaic virus] 67 5e-09 >gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus] Length = 825 Score = 77.8 bits (190), Expect = 2e-12 Identities = 42/115 (36%), Positives = 58/115 (50%) Frame = +3 Query: 3 WWAAVLTKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXX 182 +W VL T E C+Y SG F +E +H NEKE AV+ K+ Sbjct: 705 FWGGVLKVKTAETEEICKYTSGSFKTAEKN-YHSNEKELLAVKNTISKFSIYLIPVKFLV 763 Query: 183 XXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 DN + FLK KI ++ R++RWQ Y +DI ++ +N+LADFLTRD Sbjct: 764 RTDNRNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEGPKNVLADFLTRD 818 >gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus] Length = 814 Score = 77.8 bits (190), Expect = 2e-12 Identities = 43/118 (36%), Positives = 59/118 (50%) Frame = +3 Query: 3 WWAAVLTKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXX 182 +W VL T + E CRY SG F +E +H NEKE AV+ K+ Sbjct: 698 FWGGVLKAKTADKEEVCRYTSGSFKTAEKN-YHSNEKELLAVKNTISKFSIYLTPVKFLV 756 Query: 183 XXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRDGGN 356 DN + FLK KI ++ R++RWQ Y +DI ++ +N+LAD LTRD N Sbjct: 757 RTDNRNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEGSKNVLADCLTRDFQN 814 >gb|AEA39176.1| polyprotein [Dahlia mosaic virus] Length = 808 Score = 77.8 bits (190), Expect = 2e-12 Identities = 43/118 (36%), Positives = 59/118 (50%) Frame = +3 Query: 3 WWAAVLTKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXX 182 +W VL T + E CRY SG F +E +H NEKE AV+ K+ Sbjct: 692 FWGGVLKAKTADKEEVCRYTSGSFKTAEKN-YHSNEKELLAVKNTISKFSIYLTPVKFLV 750 Query: 183 XXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRDGGN 356 DN + FLK KI ++ R++RWQ Y +DI ++ +N+LAD LTRD N Sbjct: 751 RTDNKNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEGPKNVLADCLTRDFQN 808 >gb|ADZ44590.1| polyprotein [Dahlia mosaic virus] Length = 806 Score = 77.4 bits (189), Expect = 3e-12 Identities = 42/118 (35%), Positives = 59/118 (50%) Frame = +3 Query: 3 WWAAVLTKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXX 182 +W VL T + E CRY SG F +E +H NEK+ AV+ K+ Sbjct: 690 FWGGVLKAKTADKEAVCRYTSGSFKTAEKN-YHSNEKKLLAVKNTISKFSIYLTPVKFLV 748 Query: 183 XXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRDGGN 356 DN + FLK KI ++ R++RWQ Y +DI ++ +N+LAD LTRD N Sbjct: 749 RTDNRNFTYFLKTKISGDNKQGRLIRWQMWFSRYSFDIEHLEGSKNVLADCLTRDFQN 806 >gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10] Length = 810 Score = 76.3 bits (186), Expect = 6e-12 Identities = 42/115 (36%), Positives = 58/115 (50%) Frame = +3 Query: 3 WWAAVLTKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXX 182 +W VL T E CRY SG F +E +H NEKE AV+ A K+ Sbjct: 694 YWGGVLKAKTAEKEEVCRYTSGSFKTAEKN-YHSNEKELLAVKNAISKFSIYLTPVKFLV 752 Query: 183 XXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 D+ + FLK KI ++ R++RWQ Y +DI ++ +N+LAD LTRD Sbjct: 753 RTDSKNFTYFLKTKISGDNKQGRLVRWQMWFSRYTFDIEHLEGLKNVLADCLTRD 807 >gb|ABW80581.1| polyprotein [Dahlia mosaic virus] Length = 812 Score = 75.5 bits (184), Expect = 1e-11 Identities = 42/118 (35%), Positives = 58/118 (49%) Frame = +3 Query: 3 WWAAVLTKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXX 182 +W VL T + E CRY SG F +E +H NEKE AV+ K+ Sbjct: 696 FWGGVLKAKTADKEEVCRYTSGSFKTAERN-YHSNEKELLAVKNTISKFSIYLTPVKFLV 754 Query: 183 XXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRDGGN 356 DN + FLK KI ++ R++RWQ Y +DI ++ +N+LAD L RD N Sbjct: 755 RTDNRNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEGSKNVLADCLPRDFQN 812 >ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] gi|21427196|gb|AAM53128.1| ORFV [Mirabilis mosaic virus] Length = 674 Score = 74.3 bits (181), Expect = 2e-11 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 2/125 (1%) Frame = +3 Query: 3 WWAAVLTKATLNGE-VPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXX 179 +W VL T GE + CRY SG F +E +H NEKE AV++ K+ Sbjct: 549 FWGGVLKAQTTEGEELICRYSSGTFKPAELN-YHSNEKELLAVKQVITKFSIYLTPVCFT 607 Query: 180 XXXDNSSV-KAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRDGGN 356 DN ++ K F+ KI ++ R++RWQ +Y + + +K +N+LAD+LTR+ N Sbjct: 608 VRTDNVNLLKGFMNKKITGDSKQGRLIRWQMWFSHYTFKVDHLKGEQNVLADYLTREFHN 667 Query: 357 *S*FH 371 + H Sbjct: 668 GNVIH 672 >gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus] Length = 673 Score = 73.9 bits (180), Expect = 3e-11 Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Frame = +3 Query: 3 WWAAVLTKATLNG-EVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXX 179 +W VL T G E+ CRY SG F +E +H NEKE AV++ K+ Sbjct: 551 FWGGVLKAQTTEGNELICRYSSGTFKPAELN-YHSNEKELLAVKQVITKFSIYLTPVTFT 609 Query: 180 XXXDNSSV-KAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 DN ++ K F+ KI ++ R++RWQ +Y +++ +K +N+LAD+LTR+ Sbjct: 610 VRTDNVNLLKRFMNTKITGDSKQGRLIRWQMWLSHYTFNVNHLKGEKNVLADYLTRE 666 >gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland] Length = 673 Score = 73.9 bits (180), Expect = 3e-11 Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Frame = +3 Query: 3 WWAAVLTKATLNG-EVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXX 179 +W VL T G E+ CRY SG F +E +H NEKE AV++ K+ Sbjct: 551 FWGGVLKAQTTEGNELICRYSSGTFKPAELN-YHSNEKELLAVKQVITKFSIYLTPVTFT 609 Query: 180 XXXDNSSV-KAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 DN ++ K F+ KI ++ R++RWQ +Y +++ +K +N+LAD+LTR+ Sbjct: 610 VRTDNVNLLKRFMNTKITGDSKQGRLIRWQMWLSHYTFNVNHLKGEKNVLADYLTRE 666 >emb|CCG14716.1| ORF V protein [Strawberry vein banding virus] Length = 699 Score = 72.4 bits (176), Expect = 8e-11 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Frame = +3 Query: 6 WAAVLTKATLNG-EVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXX 182 W AVL G EV CRY SG F +E +H NEKE ++ KA K + Sbjct: 581 WGAVLKAKLPEGKEVICRYASGTFKPAEKN-YHSNEKEILSIIKAIKAFRAYILPYKFLV 639 Query: 183 XXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 DN++ F++ I +++R++RWQ + Y +DI + +N+LAD +TR+ Sbjct: 640 RTDNTNAAYFVRTNIAGDYKQSRLVRWQMALREYSFDIEHVSGQKNVLADIMTRE 694 >ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus] gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein banding virus] Length = 708 Score = 72.0 bits (175), Expect = 1e-10 Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 1/115 (0%) Frame = +3 Query: 6 WAAVLTKATLNG-EVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXX 182 W A+L G EV CRY SG F +E +H NEKE ++ KA K + Sbjct: 590 WGAILKAKLPEGKEVICRYASGTFKPAEKN-YHSNEKEILSIIKAIKAFRAYILPYKFLV 648 Query: 183 XXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 DN++ F++ I +++R++RWQ + Y +DI + +N+LAD +TR+ Sbjct: 649 RTDNTNAAYFVRTNIAGDYKQSRLVRWQMALREYSFDIEHVSGQKNVLADIMTRE 703 >ref|NP_619548.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease; Reverse transcriptase] [Figwort mosaic virus] gi|130600|sp|P09523.1|POL_FMVD RecName: Full=Enzymatic polyprotein; Includes: RecName: Full=Aspartic protease; Includes: RecName: Full=Endonuclease; Includes: RecName: Full=Reverse transcriptase gi|58813|emb|CAA29527.1| unnamed protein product [Figwort mosaic virus] Length = 666 Score = 70.5 bits (171), Expect = 3e-10 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 1/116 (0%) Frame = +3 Query: 3 WWAAVLTKATLNG-EVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXX 179 +W VL L+G E+ CRY SG F +E +H N+KE AV++ K+ Sbjct: 549 FWGGVLKARALDGVELICRYSSGSFKQAEKN-YHSNDKELLAVKQVITKFSAYLTPVRFT 607 Query: 180 XXXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 DN + FL+ ++ ++ R++RWQ Y +D+ ++ +N+LAD LTRD Sbjct: 608 VRTDNKNFTYFLRINLKGDSKQGRLVRWQNWFSKYQFDVEHLEGVKNVLADCLTRD 663 >gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus] Length = 657 Score = 68.9 bits (167), Expect = 9e-10 Identities = 39/109 (35%), Positives = 57/109 (52%) Frame = +3 Query: 21 TKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXXXXDNSS 200 TK + E+ +Y SG FTD+E R+ I+E E AV + F+KW D+ Sbjct: 546 TKDFVQKELLTKYASGTFTDTEK-RYPIHELETLAVLQTFRKWKVDLLSKPFILKTDSKY 604 Query: 201 VKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 V FL+ KI++ + R++RWQ E ++Y IK EN D LTR+ Sbjct: 605 VTGFLRYKIKANYNQGRLIRWQLELSQFNYRTFYIKGSENYGPDTLTRE 653 >gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus] Length = 680 Score = 68.9 bits (167), Expect = 9e-10 Identities = 39/109 (35%), Positives = 57/109 (52%) Frame = +3 Query: 21 TKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXXXXDNSS 200 TK + E+ +Y SG FTD+E R+ I+E E AV + F+KW D+ Sbjct: 569 TKDFVQKELLTKYASGTFTDTEK-RYPIHELETLAVLQTFRKWKVDLLTKPFILKTDSKY 627 Query: 201 VKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 V FL+ KI++ + R++RWQ E ++Y IK EN D LTR+ Sbjct: 628 VTGFLRYKIKANYNQGRLIRWQLELSQFNYRTFYIKGSENYGPDTLTRE 676 >gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus] Length = 657 Score = 68.6 bits (166), Expect = 1e-09 Identities = 39/109 (35%), Positives = 56/109 (51%) Frame = +3 Query: 21 TKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXXXXDNSS 200 TK + E+ +Y SG FTD+E R+ I+E E AV + F+KW D+ Sbjct: 546 TKDFVQKELLTKYASGTFTDTEK-RYPIHELETLAVLQTFRKWKVDLLSKPFILKTDSKY 604 Query: 201 VKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 V FL+ KI++ + R++RWQ E + Y IK EN D LTR+ Sbjct: 605 VTGFLRYKIKANYNQGRLIRWQLELSQFSYRTFYIKGSENYGPDTLTRE 653 >gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus] Length = 667 Score = 68.6 bits (166), Expect = 1e-09 Identities = 39/109 (35%), Positives = 56/109 (51%) Frame = +3 Query: 21 TKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXXXXDNSS 200 TK + E+ +Y SG FTD+E R+ I+E E AV + F+KW D+ Sbjct: 556 TKDFVQKELLTKYASGTFTDTEK-RYPIHELETLAVLQTFRKWKVDLLSKPFILKTDSKY 614 Query: 201 VKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 V FL+ KI++ + R++RWQ E + Y IK EN D LTR+ Sbjct: 615 VTGFLRYKIKANYNQGRLIRWQLELSQFSYRTFYIKGSENYGPDTLTRE 663 >ref|NP_395469.1| putative reverse transcriptase [Blueberry red ringspot virus] gi|16033536|gb|AAL13274.1|AF404509_4 putative reverse transcriptase [Blueberry red ringspot virus] Length = 657 Score = 68.2 bits (165), Expect = 2e-09 Identities = 39/109 (35%), Positives = 56/109 (51%) Frame = +3 Query: 21 TKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXXXXDNSS 200 TK + E+ +Y SG FTD+E R+ I+E E AV + F+KW D+ Sbjct: 546 TKDFVQKELLTKYASGTFTDTEK-RYPIHELETLAVLQTFRKWKVDLLSKPFILKTDSKY 604 Query: 201 VKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 V FL+ KI++ + R +RWQ E ++Y IK EN D LTR+ Sbjct: 605 VTGFLRYKIKANYNQGRFIRWQLELSQFNYRTFYIKGSENYGPDTLTRE 653 >ref|YP_006607892.1| reverse transcriptase [Soybean Putnam virus] gi|401620160|gb|AFP95350.1| reverse transcriptase [Soybean Putnam virus] Length = 699 Score = 68.2 bits (165), Expect = 2e-09 Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 2/117 (1%) Frame = +3 Query: 3 WWAAVLTKATLNG--EVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXX 176 +W +L T N E+ CRY SG F +E +H NEKE AV KK+ Sbjct: 581 FWGGILKARTENSDSELICRYTSGSFKAAELN-YHSNEKEILAVMNTIKKFTGYLTPVKF 639 Query: 177 XXXXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 DN + FLK ++ ++ R++RWQ Y +++ + +N+ ADFLTR+ Sbjct: 640 LIRTDNKNFTHFLKINLKGDYKQGRLVRWQMWFSRYVFEVEHLSGDKNVFADFLTRE 696 >ref|YP_001931967.1| replicase [Eupatorium vein clearing virus] gi|172041764|gb|ACB69773.1| replicase [Eupatorium vein clearing virus] Length = 674 Score = 67.8 bits (164), Expect = 2e-09 Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 5/120 (4%) Frame = +3 Query: 3 WWAAVLTKATL--NGEVP---CRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXX 167 +W +L + N E+ C Y SG F +E +H NEKE AV ++ + +P Sbjct: 552 YWGGILKAEVIHSNNEITEEICCYASGTFKQAELN-YHSNEKEILAVIRSIQSFPVYLTP 610 Query: 168 XXXXXXXDNSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 DN +++ FL +K E + R++RWQ ++Y++ + IK N LAD+L+R+ Sbjct: 611 VEFIVRTDNKTMEHFLTSKFELGTKSGRLVRWQMWFKHYNFKVEHIKGTSNFLADYLSRE 670 >gb|AGT42189.1| reverse transcriptase [Cauliflower mosaic virus] Length = 675 Score = 66.6 bits (161), Expect = 5e-09 Identities = 37/112 (33%), Positives = 56/112 (50%) Frame = +3 Query: 12 AVLTKATLNGEVPCRYCSGLFTDSETTRWHINEKEFFAVRKAFKKWPXXXXXXXXXXXXD 191 A+ +N E+ CRY SG F +E +H N+KE AV KK+ D Sbjct: 559 AIKINEGINTELICRYASGSFKAAEKN-YHSNDKETLAVINTIKKFSIYLTPVHFLIRTD 617 Query: 192 NSSVKAFLKNKIESKPEKARILRWQAECQYYDYDIVIIKSHENILADFLTRD 347 N+ K+F+ + + R +RWQA +Y +D+ IK +N ADFL+R+ Sbjct: 618 NTHFKSFVNLNYKGDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSRE 669