BLASTX nr result
ID: Rehmannia25_contig00025355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00025355
(1092 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 246 e-105
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 244 e-101
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 231 2e-95
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 226 4e-95
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 221 1e-94
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera] 218 1e-94
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 225 1e-94
ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa In... 225 5e-92
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 213 8e-92
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 213 8e-92
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 219 1e-91
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 210 2e-91
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 211 3e-91
ref|YP_002000554.1| orf490 [Oryza sativa Japonica Group] gi|2349... 222 4e-91
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 209 5e-91
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 211 5e-91
emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera] 211 8e-91
gb|EMT21953.1| ABC transporter C family member 10 [Aegilops taus... 209 3e-90
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 225 9e-90
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 203 6e-89
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 246 bits (629), Expect(2) = e-105
Identities = 128/253 (50%), Positives = 170/253 (67%), Gaps = 3/253 (1%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQ--VCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASL 578
E+YM+QPPGF+ N+ Q VCKLHKALYGLKQA +AWF++L+ L GF ++K+D SL
Sbjct: 868 EVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSL 927
Query: 577 FIRVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTK 398
F+R + S +TG+S ++ LI L F +KDLG+L YFLG+E+ T
Sbjct: 928 FVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLRGLFSLKDLGELSYFLGIEVKKTA 987
Query: 397 DGML-LSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNPSVDGQLYRQVVGSLQY 221
DG L LSQK+Y QDLL+K +M G++ S G+P + YR VVG+LQY
Sbjct: 988 DGGLHLSQKKYIQDLLKKTKMDGAKSLPTPMLSGLKLSAGMGDPIDNVFEYRSVVGALQY 1047
Query: 220 LTITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSD 41
+TITRPEI F+VNK+ QFMQ PLD HWKA+KR+LRY++GT DLG+ L S +++ GF D
Sbjct: 1048 ITITRPEIAFSVNKVCQFMQKPLDTHWKAVKRILRYLNGTTDLGIVLKPSETMNLVGFCD 1107
Query: 40 SDWASDPDDRKST 2
+DW SD DDR+ST
Sbjct: 1108 ADWGSDVDDRRST 1120
Score = 162 bits (409), Expect(2) = e-105
Identities = 72/112 (64%), Positives = 93/112 (83%)
Frame = -2
Query: 1088 RWKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYT 909
+WKEAM +E+ AL KNKTW++ +LP R +GCRWVFK+KRN DGSVSRYKARLVAKGY+
Sbjct: 758 KWKEAMDEEFRALMKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYS 817
Query: 908 QIAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
Q+ G DF + FSPVVKPTT R++L IA+S+ W +RQ+DV+NAFL+G L ++V
Sbjct: 818 QVPGFDFYETFSPVVKPTTIRVVLAIAVSQSWCIRQLDVNNAFLNGELQEEV 869
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 244 bits (622), Expect(2) = e-101
Identities = 121/250 (48%), Positives = 165/250 (66%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
E++M+QP GF +N VC+LHKALYGLKQA +AWFE+L L S GF ++K+D SLF+
Sbjct: 1058 EVFMQQPQGFIDEQNPNLVCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFL 1117
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
R +PN + G+ +TSLI LN F +KDLG++HYFLG+++ +T +G
Sbjct: 1118 RFTPNHITYVLVYVDDILVIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNG 1177
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNPSVDGQLYRQVVGSLQYLTI 212
+ LSQ +Y +DLL+K +M + G+P D YR VG+LQY+TI
Sbjct: 1178 LHLSQTKYIRDLLQKTKMVHCKPARTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTI 1237
Query: 211 TRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDSDW 32
TRPE++F+VNK+ QFMQNP + HWK +KR+LRY+ GTL GL L KS +L + GF D+DW
Sbjct: 1238 TRPELSFSVNKVCQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADW 1297
Query: 31 ASDPDDRKST 2
ASD DDR+ST
Sbjct: 1298 ASDLDDRRST 1307
Score = 153 bits (386), Expect(2) = e-101
Identities = 67/113 (59%), Positives = 90/113 (79%)
Frame = -2
Query: 1091 NRWKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGY 912
+ WK+AM EY+ALQ+N TW++ LP GR IGC+WV+K K N DG+V +YKARLVAKG+
Sbjct: 947 DEWKKAMVAEYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGF 1006
Query: 911 TQIAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
Q AG DFT+ FSPVVKP+T R++ TIALS+ W ++Q+DV+NAFL+G L ++V
Sbjct: 1007 HQQAGFDFTETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEV 1059
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 231 bits (588), Expect(2) = 2e-95
Identities = 121/252 (48%), Positives = 162/252 (64%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
+I+M QP GF N VCKL+K+LYGLKQA +AWFE+L L LGF ++K+D SLFI
Sbjct: 1004 DIFMHQPQGFIDPVNPNYVCKLNKSLYGLKQAPRAWFEKLHQALGILGFSSTKSDQSLFI 1063
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
++P ITGN+D V +I LN+ F +KDLG + YFLG+++ +T G
Sbjct: 1064 NITPTHSTYILVYVDDILITGNNDQFVQHVITQLNNQFALKDLGDIDYFLGIQVKHTSAG 1123
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNPSVDGQLYRQVVGSLQYLTI 212
M LSQ +Y +LL+K +M + S P + QLYR VG+LQY TI
Sbjct: 1124 MHLSQAKYISNLLQKTKMLHVKSVPTPMVSNQSLSNSGSAPFSNTQLYRSTVGALQYATI 1183
Query: 211 TRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQL--FKSPHLHVTGFSDS 38
TRP+IT++VN++ QFMQ+PL HWKA+KR+LRY++GTL GL L + HL++TGF D+
Sbjct: 1184 TRPDITYSVNRVCQFMQDPLTAHWKAVKRILRYLAGTLHHGLHLQHNSNSHLNITGFCDA 1243
Query: 37 DWASDPDDRKST 2
DWASD DDR ST
Sbjct: 1244 DWASDVDDRHST 1255
Score = 147 bits (370), Expect(2) = 2e-95
Identities = 66/113 (58%), Positives = 88/113 (77%)
Frame = -2
Query: 1091 NRWKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGY 912
+ WK+AM EY AL +N TW + P R +IGC+WVFK+K N DG++++YKARLVAKG+
Sbjct: 893 SHWKQAMTDEYLALLRNNTWDLVPPPTDRKLIGCKWVFKVKENXDGTINKYKARLVAKGF 952
Query: 911 TQIAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
QIAG DF + FSPVVKPTT R++LTIAL+ W +RQ+DV+NAFL+G L +D+
Sbjct: 953 HQIAGFDFNETFSPVVKPTTIRIVLTIALNLQWKVRQLDVNNAFLNGDLHEDI 1005
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 226 bits (577), Expect(2) = 4e-95
Identities = 118/252 (46%), Positives = 156/252 (61%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
E+YMEQPPG+E VCKL KALYGLKQA +AW+ RL LS LGF SKAD SLF
Sbjct: 428 EVYMEQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFF 487
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + ++L+ L+ F +KDLG LHYFLG+E+H KDG
Sbjct: 488 YKKGQVSIFLLIYVDDIIMASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDG 547
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGN--PSVDGQLYRQVVGSLQYL 218
++LSQ++YA DLLR+V M + S +G D YR VVG+LQYL
Sbjct: 548 LMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYL 607
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+I+F++NK+ QF+ P HW A+KR+LRY+ T+D GL+ ++P L V+GFSD+
Sbjct: 608 TLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDA 667
Query: 37 DWASDPDDRKST 2
DWA PDDR+ST
Sbjct: 668 DWAGSPDDRRST 679
Score = 149 bits (377), Expect(2) = 4e-95
Identities = 68/111 (61%), Positives = 88/111 (79%)
Frame = -2
Query: 1085 WKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQ 906
WKEAM EY AL +NKTW + GRNVI C+WV+K+KR ADGS+ RYKARLVAKG+ Q
Sbjct: 319 WKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQ 378
Query: 905 IAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
G+D+ D FSPVVK T R++L++A+S+GW LRQ+DV NAFLHG+L+++V
Sbjct: 379 RYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEV 429
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 221 bits (563), Expect(2) = 1e-94
Identities = 115/252 (45%), Positives = 159/252 (63%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
E+YM+QPPG+E + VCKL KALYGLKQA +AW+ RL N L SLGF+ASKAD SLF
Sbjct: 926 EVYMQQPPGYEDSTKLNYVCKLDKALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFF 985
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + ++ +L+ LN F +KDLG L+YFLG+E++ +DG
Sbjct: 986 YNKGSVTIFVLVYVDDIIVASSTHKATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRDG 1045
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNPSVDGQL--YRQVVGSLQYL 218
++L+Q +YA DLL+KV M+ + S +G+P + + YR +VG+LQYL
Sbjct: 1046 IILTQDKYASDLLKKVGMSDCKPISTPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYL 1105
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+I F+VNK+ QF+ P LHW A+KR+LRYI +LGL + +S V+ FSD+
Sbjct: 1106 TLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSAFSDA 1165
Query: 37 DWASDPDDRKST 2
DWA DDRKST
Sbjct: 1166 DWAGSVDDRKST 1177
Score = 154 bits (388), Expect(2) = 1e-94
Identities = 72/111 (64%), Positives = 88/111 (79%)
Frame = -2
Query: 1085 WKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQ 906
WK+AM EY AL KNKTW + GRNVIGC+WV+KIKR ADGS+ RYKARLVAKGY Q
Sbjct: 817 WKDAMDIEYSALMKNKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQ 876
Query: 905 IAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
G+D+ D FSPVVK T R+IL+IA+S+GW L Q+DV NAFLHG+L+++V
Sbjct: 877 QYGIDYDDTFSPVVKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEV 927
>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
Length = 955
Score = 218 bits (554), Expect(2) = 1e-94
Identities = 117/252 (46%), Positives = 158/252 (62%), Gaps = 4/252 (1%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQ--VCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASL 578
E+YM+QPPGF+ N+ Q VCKLHKALYGLKQA +AWF++L+ L GF ++K D SL
Sbjct: 659 EVYMDQPPGFDGKTNQEQKLVCKLHKALYGLKQAPRAWFDKLKISLQQFGFSSTKXDQSL 718
Query: 577 FIRVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTK 398
F+R + S +T +S + LI L F +KDLG L YFLG+E+ T
Sbjct: 719 FVRFTNCSSLFVLVYVDDIVVTXSSSQXIHELISRLXGLFXLKDLGXLSYFLGIEVKKTT 778
Query: 397 DG--MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNPSVDGQLYRQVVGSLQ 224
+G L +K+Y QDLL+K +M G++ S G+P + YR VVG+LQ
Sbjct: 779 BGGLHLSXKKKYIQDLLKKTKMDGAKSLPTPMLSXLKLSAGMGDPIDNVFXYRSVVGALQ 838
Query: 223 YLTITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFS 44
Y+TITRPEI F+VNK QFM PLD HWKA+KR+LRY++GT LG+ L S +++ GF
Sbjct: 839 YITITRPEIAFSVNKXCQFMXKPLDTHWKAVKRILRYLNGTXXLGIVLKPSETMNLVGFC 898
Query: 43 DSDWASDPDDRK 8
D++ SD DR+
Sbjct: 899 DABXGSDVHDRR 910
Score = 157 bits (397), Expect(2) = 1e-94
Identities = 70/112 (62%), Positives = 91/112 (81%)
Frame = -2
Query: 1088 RWKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYT 909
+WKEAM +E+ AL KNKTW++ +LP R +GCRWVFK+KRN DGSVSRYKARLVAKGY+
Sbjct: 549 KWKEAMDEEFRALMKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYS 608
Query: 908 QIAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
Q+ G DF + FS VVKPTT R++L I +S+ W +RQ+DV+NAFL+G L ++V
Sbjct: 609 QVPGFDFYETFSXVVKPTTIRVVLXIVVSQSWFIRQLDVNNAFLNGELQEEV 660
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 225 bits (573), Expect(2) = 1e-94
Identities = 117/252 (46%), Positives = 156/252 (61%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
E+YM+QPPG+E VCKL KALYGLKQA +AW+ RL LS LGF SKAD SLF
Sbjct: 1006 EVYMKQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFF 1065
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + ++L+ L+ F +KDLG LHYFLG+E+H KDG
Sbjct: 1066 YKKGQVSIFLLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDG 1125
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGN--PSVDGQLYRQVVGSLQYL 218
++LSQ++YA DLLR+V M + S +G D YR VVG+LQYL
Sbjct: 1126 LMLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYL 1185
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+I+F++NK+ QF+ P HW A+KR+LRY+ T+D GL+ ++P L V+GFSD+
Sbjct: 1186 TLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDA 1245
Query: 37 DWASDPDDRKST 2
DWA PDDR+ST
Sbjct: 1246 DWAGSPDDRRST 1257
Score = 149 bits (377), Expect(2) = 1e-94
Identities = 68/111 (61%), Positives = 88/111 (79%)
Frame = -2
Query: 1085 WKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQ 906
WKEAM EY AL +NKTW + GRNVI C+WV+K+KR ADGS+ RYKARLVAKG+ Q
Sbjct: 897 WKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQ 956
Query: 905 IAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
G+D+ D FSPVVK T R++L++A+S+GW LRQ+DV NAFLHG+L+++V
Sbjct: 957 RYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEV 1007
>ref|YP_514636.1| hypothetical protein OrsaiPp07 [Oryza sativa Indica Group]
gi|289065044|ref|YP_003433855.1| hypothetical protein
OrrupM_p18 [Oryza rufipogon] gi|74100111|gb|AAZ99275.1|
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] gi|74100166|gb|AAZ99329.1| hypothetical
protein (mitochondrion) [Oryza sativa Japonica Group]
gi|74100220|gb|AAZ99382.1| hypothetical protein
(mitochondrion) [Oryza sativa Japonica Group]
gi|285026126|dbj|BAI67959.1| hypothetical protein [Oryza
rufipogon] gi|285026155|dbj|BAI67987.1| hypothetical
protein [Oryza sativa Indica Group]
gi|353685219|gb|AER12982.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|353685288|gb|AER13050.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277649|gb|AEZ03755.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277659|gb|AEZ03764.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|528540457|dbj|BAN67511.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|528540460|dbj|BAN67513.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
Length = 490
Score = 225 bits (574), Expect(2) = 5e-92
Identities = 115/252 (45%), Positives = 156/252 (61%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
++YM QPPG+E VCKL KALYGLKQA +AWF RL L +LGF+ SKADASLF
Sbjct: 106 DVYMRQPPGYEDKSKLDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFF 165
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + + ++L+ L F +KDLG LHYFLG+E++ DG
Sbjct: 166 YKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKVHDG 225
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNP--SVDGQLYRQVVGSLQYL 218
++L+Q++YA DLL++V M G + +G P + D YR +VG+LQYL
Sbjct: 226 IILTQEKYATDLLKRVGMHGCKEINTPLSTTDKLLAKEGEPLGAEDSTRYRSIVGALQYL 285
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+I F VNK+ Q++ P LHW A+KR+LRY+ G+L LGL++ KS V+ FSD+
Sbjct: 286 TLTRPDIAFPVNKVCQYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAFSDA 345
Query: 37 DWASDPDDRKST 2
DWA PDDRKST
Sbjct: 346 DWAGCPDDRKST 357
Score = 140 bits (354), Expect(2) = 5e-92
Identities = 64/107 (59%), Positives = 83/107 (77%)
Frame = -2
Query: 1073 MAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQIAGV 894
M +EY AL +N TW + GRN+I C+WV+KIKR ADG++ RYKARLVAKG+ Q G+
Sbjct: 1 MDEEYGALMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGI 60
Query: 893 DFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
D+ + FSPVVK T RLIL++A+S GW LRQ+DV NAFLHG+L++DV
Sbjct: 61 DYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDV 107
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1621
Score = 213 bits (541), Expect(2) = 8e-92
Identities = 114/252 (45%), Positives = 153/252 (60%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
E+YM QPPGFE + VCKL KALYGLKQA +AWF RL L LGF+ SKAD SLF
Sbjct: 788 EVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFF 847
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + +S+ +L+ L F +KDLG+LHYFLG+E+ ++G
Sbjct: 848 LNKGDITMFVLVYVDDIIVASSSEKATAALLQNLKGEFALKDLGELHYFLGIEVSKVQNG 907
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGN--PSVDGQLYRQVVGSLQYL 218
++L+Q +YA DLL+KV M + S +G+ D YR VVG+LQYL
Sbjct: 908 IVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYL 967
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+I F+VNK+ QF+ P +HW A+KR+LRY+ LGL++ KS V+GFSD+
Sbjct: 968 TLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDA 1027
Query: 37 DWASDPDDRKST 2
DWA DDR+ST
Sbjct: 1028 DWAGCLDDRRST 1039
Score = 152 bits (385), Expect(2) = 8e-92
Identities = 70/111 (63%), Positives = 88/111 (79%)
Frame = -2
Query: 1085 WKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQ 906
WK AM EY+AL KNKTW + GRN+IGC+WV+KIKR ADG++ RYKARLVAKG+ Q
Sbjct: 679 WKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQ 738
Query: 905 IAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
G+D+ D FSPVVK T R+IL++A+SKGW LRQ+DV NAFLHG L+++V
Sbjct: 739 RYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEV 789
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 213 bits (541), Expect(2) = 8e-92
Identities = 114/252 (45%), Positives = 153/252 (60%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
E+YM QPPGFE + VCKL KALYGLKQA +AWF RL L LGF+ SKAD SLF
Sbjct: 1059 EVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTSLFF 1118
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + +S+ +L+ L F +KDLG+LHYFLG+E+ ++G
Sbjct: 1119 LNKGDITMFVLVYVDDIIVASSSERATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNG 1178
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGN--PSVDGQLYRQVVGSLQYL 218
++L+Q +YA DLL+KV M + S +G+ D YR VVG+LQYL
Sbjct: 1179 IVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYL 1238
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+I F+VNK+ QF+ P +HW A+KR+LRY+ LGL++ KS V+GFSD+
Sbjct: 1239 TLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDA 1298
Query: 37 DWASDPDDRKST 2
DWA DDR+ST
Sbjct: 1299 DWAGCLDDRRST 1310
Score = 152 bits (385), Expect(2) = 8e-92
Identities = 70/111 (63%), Positives = 88/111 (79%)
Frame = -2
Query: 1085 WKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQ 906
WK AM EY+AL KNKTW + GRN+IGC+WV+KIKR ADG++ RYKARLVAKG+ Q
Sbjct: 950 WKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQ 1009
Query: 905 IAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
G+D+ D FSPVVK T R+IL++A+SKGW LRQ+DV NAFLHG L+++V
Sbjct: 1010 RYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEV 1060
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 219 bits (559), Expect(2) = 1e-91
Identities = 118/253 (46%), Positives = 156/253 (61%), Gaps = 3/253 (1%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
E+YM QPPGFE + + +CKL KALYGLKQA +AW+ RL L LGF +SKAD SLF
Sbjct: 505 EVYMRQPPGFEDARQPHFLCKLDKALYGLKQAPRAWYSRLSKKLQELGFSSSKADTSLFF 564
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + +S V +L+ L F +KDLG LHYFLG+E+ T
Sbjct: 565 YNKGHHKMFVLVYVDDIIVASSSSPAVNALLKDLEKDFALKDLGDLHYFLGIEVKRTPQT 624
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGN---PSVDGQLYRQVVGSLQY 221
+LLSQ+RY +LL +V MT + S G+ PS D YR +VG+LQY
Sbjct: 625 LLLSQERYTTELLERVNMTSCKPVSTPLSTAEKLSVEIGDELGPS-DVTQYRSIVGALQY 683
Query: 220 LTITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSD 41
LT+TRP+I+++VNK+ QF+Q P HW A+KR+LRY+ GTLDLGL++ KS V+ FSD
Sbjct: 684 LTLTRPDISYSVNKVCQFLQTPTTAHWSAVKRILRYLKGTLDLGLKIVKSSSNLVSAFSD 743
Query: 40 SDWASDPDDRKST 2
+DWA DDR+ST
Sbjct: 744 ADWAGSVDDRRST 756
Score = 145 bits (366), Expect(2) = 1e-91
Identities = 66/111 (59%), Positives = 86/111 (77%)
Frame = -2
Query: 1085 WKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQ 906
WK+AM KE+ AL NKTW + G+N+I +WV+KIK+ ADG++ RYKARLVAKG+ Q
Sbjct: 396 WKQAMDKEFSALLHNKTWHLVPPVKGKNIIDSKWVYKIKKKADGTIDRYKARLVAKGFKQ 455
Query: 905 IAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
G+D+ D FSPVVK T RL+L+IA+S+GW LRQ+DV NAFLHG LD++V
Sbjct: 456 RYGIDYEDTFSPVVKAATIRLVLSIAMSQGWSLRQLDVQNAFLHGYLDEEV 506
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 210 bits (535), Expect(2) = 2e-91
Identities = 110/252 (43%), Positives = 159/252 (63%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
+++M QPPG+E K+ Y VCKL KALYGLKQA +AW+ RL L LGF++SK+D SLF
Sbjct: 907 DVFMRQPPGYE-QKDGY-VCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFF 964
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + +S +L+ LN F +KDLG+LHYFLG+E+ +G
Sbjct: 965 YSKGDVTIFMLVYVDDIIVASSSIDATNALLKNLNQEFALKDLGRLHYFLGIEVKELNNG 1024
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNP--SVDGQLYRQVVGSLQYL 218
++L+Q++YA D+L++V M+ + S +GNP D YR +VG+LQYL
Sbjct: 1025 IVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYL 1084
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+++F+VNK+ Q++ P HW A KR+LRY+ T+ LGL++ KS L V+ FSD+
Sbjct: 1085 TLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDA 1144
Query: 37 DWASDPDDRKST 2
DWA DDR+ST
Sbjct: 1145 DWAGCLDDRRST 1156
Score = 154 bits (388), Expect(2) = 2e-91
Identities = 69/111 (62%), Positives = 88/111 (79%)
Frame = -2
Query: 1085 WKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQ 906
WKEAM EY+AL KNKTW + G+N+I C+WV+K+K+ ADGS+ RYKARLVAKG+ Q
Sbjct: 798 WKEAMDSEYQALMKNKTWHLVPSKKGQNIIDCKWVYKVKQKADGSLDRYKARLVAKGFKQ 857
Query: 905 IAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
G+D+ D FSPVVK T R IL+IA+S+GW LRQ+DV NAFLHG+L++DV
Sbjct: 858 RYGIDYEDTFSPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDV 908
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 211 bits (536), Expect(2) = 3e-91
Identities = 113/252 (44%), Positives = 152/252 (60%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
E+YM QPPGFE + VCKL KALYGLKQA +AWF RL L LGF+ SK D SLF
Sbjct: 1066 EVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFF 1125
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + +S+ +L+ L F +KDLG+LHYFLG+E+ ++G
Sbjct: 1126 LNKGDITMFVLVYVDDIIVASSSEKATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNG 1185
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGN--PSVDGQLYRQVVGSLQYL 218
++L+Q +YA DLL+KV M + S +G+ D YR VVG+LQYL
Sbjct: 1186 IVLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYL 1245
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+I F+VNK+ QF+ P +HW A+KR+LRY+ LGL++ KS V+GFSD+
Sbjct: 1246 TLTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDA 1305
Query: 37 DWASDPDDRKST 2
DWA DDR+ST
Sbjct: 1306 DWAGCLDDRRST 1317
Score = 152 bits (385), Expect(2) = 3e-91
Identities = 70/111 (63%), Positives = 88/111 (79%)
Frame = -2
Query: 1085 WKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQ 906
WK AM EY+AL KNKTW + GRN+IGC+WV+KIKR ADG++ RYKARLVAKG+ Q
Sbjct: 957 WKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQ 1016
Query: 905 IAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
G+D+ D FSPVVK T R+IL++A+SKGW LRQ+DV NAFLHG L+++V
Sbjct: 1017 RYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEV 1067
>ref|YP_002000554.1| orf490 [Oryza sativa Japonica Group] gi|23495377|dbj|BAC19858.1|
orf490 [Oryza sativa Japonica Group]
Length = 490
Score = 222 bits (566), Expect(2) = 4e-91
Identities = 113/252 (44%), Positives = 155/252 (61%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
++YM QPPG+E VCKL KALYGL+ A +AWF RL L +LGF+ SKADASLF
Sbjct: 106 DVYMRQPPGYEDKSKLDYVCKLDKALYGLRHAPRAWFSRLSMKLQNLGFQPSKADASLFF 165
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + + ++L+ L F +KDLG LHYFLG+E++ DG
Sbjct: 166 YKKGTISIFVLIYVDDIIVASSCEKATSALLQDLKEEFALKDLGALHYFLGIEVNKVHDG 225
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNP--SVDGQLYRQVVGSLQYL 218
++L+Q++YA DLL++V M G + +G P + D YR +VG+LQYL
Sbjct: 226 IILTQEKYATDLLKRVGMHGCKEINTPLSTTDKLLAKEGEPLGAEDSTRYRSIVGALQYL 285
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+I F VNK+ Q++ P LHW A+KR+LRY+ G+L LGL++ KS V+ FSD+
Sbjct: 286 TLTRPDIAFPVNKVCQYLHAPTSLHWTAVKRILRYLKGSLGLGLRICKSDSTLVSAFSDA 345
Query: 37 DWASDPDDRKST 2
DWA PDDRKST
Sbjct: 346 DWAGCPDDRKST 357
Score = 140 bits (354), Expect(2) = 4e-91
Identities = 64/107 (59%), Positives = 83/107 (77%)
Frame = -2
Query: 1073 MAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQIAGV 894
M +EY AL +N TW + GRN+I C+WV+KIKR ADG++ RYKARLVAKG+ Q G+
Sbjct: 1 MDEEYGALMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGI 60
Query: 893 DFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
D+ + FSPVVK T RLIL++A+S GW LRQ+DV NAFLHG+L++DV
Sbjct: 61 DYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDV 107
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 209 bits (533), Expect(2) = 5e-91
Identities = 110/252 (43%), Positives = 158/252 (62%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
+++M QPPG+E K+ Y VCKL KALYGLKQA +AW+ RL L LGF++SK+D SLF
Sbjct: 1045 DVFMRQPPGYE-QKDGY-VCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFF 1102
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + +S +L+ LN F +KDLG+LHYFLG+E+ +G
Sbjct: 1103 YSKGDVAMFMLVYVDDIIVASSSIDATNALLKNLNQEFALKDLGRLHYFLGIEVKEVNNG 1162
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNP--SVDGQLYRQVVGSLQYL 218
++L+Q++YA D+L++V M+ + S +GNP D YR +VG+LQYL
Sbjct: 1163 IVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPFGPEDSTRYRSLVGALQYL 1222
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+++F+VNK+ Q++ P HW A KR+LRY+ T+ LGL++ KS L V+ FSD+
Sbjct: 1223 TLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDA 1282
Query: 37 DWASDPDDRKST 2
DWA DDR ST
Sbjct: 1283 DWAGCLDDRHST 1294
Score = 153 bits (386), Expect(2) = 5e-91
Identities = 68/111 (61%), Positives = 88/111 (79%)
Frame = -2
Query: 1085 WKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQ 906
WKEAM EY+AL KNKTW + G+N+I C+WV+K+KR ADGS+ RYKAR+VAKG+ Q
Sbjct: 936 WKEAMDSEYQALMKNKTWHLVPSKKGQNIIDCKWVYKVKRKADGSLDRYKARVVAKGFKQ 995
Query: 905 IAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
G+D+ D F+PVVK T R IL+IA+S+GW LRQ+DV NAFLHG+L++DV
Sbjct: 996 RYGIDYEDTFNPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDV 1046
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 211 bits (537), Expect(2) = 5e-91
Identities = 110/252 (43%), Positives = 159/252 (63%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
+++M QPPG+E K+ Y VCKL KALYGLKQA +AW+ RL L LGF++SK+D SLF
Sbjct: 645 DVFMRQPPGYE-QKDGY-VCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFF 702
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ + +S + +L+ LN F +KDLG+LHYFLG+E+ DG
Sbjct: 703 YSKGDVTIFMLVYVDDIIVASSSIVATNALLKNLNQEFALKDLGRLHYFLGIEVKEVNDG 762
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNP--SVDGQLYRQVVGSLQYL 218
++L+Q++YA D+L++V M+ + S +GNP D YR +VG+LQYL
Sbjct: 763 IVLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYL 822
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+++F+VNK+ Q++ HW A KR+LRY+ T+ LGL++ KS L V+ FSD+
Sbjct: 823 TLTRPDLSFSVNKVCQYLHAATTKHWVAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDA 882
Query: 37 DWASDPDDRKST 2
DWA DDR+ST
Sbjct: 883 DWAGCLDDRRST 894
Score = 151 bits (382), Expect(2) = 5e-91
Identities = 69/111 (62%), Positives = 86/111 (77%)
Frame = -2
Query: 1085 WKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYTQ 906
WKEAM EY+AL KNKTW G+N+I C+WV+K+KR ADGS+ RYKARLVAKG+ Q
Sbjct: 536 WKEAMDSEYQALMKNKTWHRVPSKKGQNIIDCKWVYKVKRKADGSLDRYKARLVAKGFKQ 595
Query: 905 IAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
G+D+ D F PVVK T R IL+IA+S+GW LRQ+DV NAFLHG+L++DV
Sbjct: 596 RYGIDYEDTFRPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDV 646
>emb|CAN63482.1| hypothetical protein VITISV_011510 [Vitis vinifera]
Length = 1124
Score = 211 bits (538), Expect(2) = 8e-91
Identities = 113/252 (44%), Positives = 154/252 (61%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQ--VCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASL 578
E+YM+Q PGF+ N+ Q VCKLHK LYGLKQA +AWF++L+ L GF ++K+D SL
Sbjct: 621 EVYMDQXPGFDGRTNQEQKLVCKLHKTLYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSL 680
Query: 577 FIRVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTK 398
F+R + S +TG+S ++ LI L+ F +KDL
Sbjct: 681 FVRFTNCSSLFVLVYVDDIVVTGSSSQEIHELISRLSGLFSLKDLD-------------- 726
Query: 397 DGMLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNPSVDGQLYRQVVGSLQYL 218
G+ LS+K+Y QDLL+K +M G++ G+P + YR VVG+LQY+
Sbjct: 727 GGLHLSKKKYIQDLLKKTKMDGAKSLPTLMLSGLKLLTGTGDPIDNVFEYRSVVGALQYI 786
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
TITRPEI F+VNK+ QFMQ PLD HWK +KR+LRY++GT DLG+ L S +++ GF D
Sbjct: 787 TITRPEIAFSVNKVCQFMQKPLDTHWKTVKRILRYLNGTTDLGIVLKPSETMNLVGFCDV 846
Query: 37 DWASDPDDRKST 2
DW SD DDR+ST
Sbjct: 847 DWGSDVDDRRST 858
Score = 150 bits (379), Expect(2) = 8e-91
Identities = 67/112 (59%), Positives = 89/112 (79%)
Frame = -2
Query: 1088 RWKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYT 909
+WKEAM +E+ AL KNKTW++ +LP R +GC+WVFK+KRN DGSVSRYKARLVAKGY
Sbjct: 511 KWKEAMDEEFRALMKNKTWSLVSLPSNRTSVGCKWVFKLKRNPDGSVSRYKARLVAKGYF 570
Query: 908 QIAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
Q+ DF+ FS VVKPTT R++L +A+S+ W +R +DV+NAFL+G L ++V
Sbjct: 571 QVPSFDFSKTFSLVVKPTTIRVVLAVAVSQSWSIRXLDVNNAFLNGELQEEV 622
>gb|EMT21953.1| ABC transporter C family member 10 [Aegilops tauschii]
Length = 3041
Score = 209 bits (532), Expect(2) = 3e-90
Identities = 112/252 (44%), Positives = 153/252 (60%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
E+YM+QPPGFE + VCKL ALYGLKQA +AW+ L L +LGF SK+D SLFI
Sbjct: 2396 EVYMKQPPGFENKDKPFHVCKLDNALYGLKQAPRAWYSHLSQKLQALGFVPSKSDTSLFI 2455
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ +T +S+ VT + L+ F +KDLG LH+FLG+E+ T+DG
Sbjct: 2456 YNKLKTSIFVLIYVDDIIVTSSSNEAVTGSLKDLSAEFALKDLGDLHFFLGIEVKKTEDG 2515
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGN--PSVDGQLYRQVVGSLQYL 218
+ LSQ++YA DL+R+ + G + S +G+ D YR +VG+LQYL
Sbjct: 2516 LHLSQEKYAADLVRRAGLQGCKASPTPLSSTEKLSLEEGDLLGQEDSTRYRSLVGALQYL 2575
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+I+FAVNK+ QF+ P +H A KR++RY+ T+ LGL KS V+ FSDS
Sbjct: 2576 TLTRPDISFAVNKVCQFLHAPTTVHLTAAKRIVRYVKNTMSLGLTFTKSSSTLVSAFSDS 2635
Query: 37 DWASDPDDRKST 2
DWA DDR+ST
Sbjct: 2636 DWAGCIDDRRST 2647
Score = 150 bits (380), Expect(2) = 3e-90
Identities = 67/112 (59%), Positives = 90/112 (80%)
Frame = -2
Query: 1088 RWKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGYT 909
RWK+AM +EY LQKNKTW + + G+N+I C+WV++IKR +DG++ RYKARLVAKG+
Sbjct: 2286 RWKKAMEEEYMTLQKNKTWHLVSPRRGKNLIDCKWVYRIKRKSDGTIDRYKARLVAKGFK 2345
Query: 908 QIAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
Q G+D+ D FSPVVK T RL+L+IA+S+GW LRQ+DV NAFLHG+L ++V
Sbjct: 2346 QRYGIDYEDTFSPVVKAATIRLVLSIAVSRGWSLRQLDVQNAFLHGVLKEEV 2397
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 225 bits (573), Expect(2) = 9e-90
Identities = 115/249 (46%), Positives = 157/249 (63%)
Frame = -3
Query: 748 IYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFIR 569
++M+QPPGF ++ VCKL+KALYGLKQA +AW+ +L L GF+AS+AD+S+FI
Sbjct: 834 VFMQQPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIH 893
Query: 568 VSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDGM 389
S + +TG+S QV+S I LN F ++DLG ++YFLG+E+ +
Sbjct: 894 HSTHDVLILLIYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMF 953
Query: 388 LLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNPSVDGQLYRQVVGSLQYLTIT 209
LSQ +Y QDLL + M S+ S G P D LYR VG+LQYLT+T
Sbjct: 954 HLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLT 1013
Query: 208 RPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDSDWA 29
RP+I+FAVNK QFM P HW A+KR+LRY+ GTL G+Q+ +S L + G++D+DWA
Sbjct: 1014 RPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWA 1073
Query: 28 SDPDDRKST 2
S PDDR+ST
Sbjct: 1074 SCPDDRRST 1082
Score = 133 bits (335), Expect(2) = 9e-90
Identities = 60/113 (53%), Positives = 82/113 (72%)
Frame = -2
Query: 1091 NRWKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGY 912
+ W AM KE+ ALQ+N TW + P N+IGC+WV+K+K DG+V RYKARLVA+G+
Sbjct: 722 SNWVLAMEKEFSALQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGF 781
Query: 911 TQIAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
TQ G+++ + FSPVVK +T R+IL +ALS W + Q+DV NAFLHG L++ V
Sbjct: 782 TQTLGLBYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEEHV 834
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 203 bits (517), Expect(2) = 6e-89
Identities = 111/252 (44%), Positives = 149/252 (59%), Gaps = 2/252 (0%)
Frame = -3
Query: 751 EIYMEQPPGFEINKNRYQVCKLHKALYGLKQASKAWFERLQNVLSSLGFRASKADASLFI 572
E+YM+QPPG+E + VCKL KALYGLKQA +AW+ RL L +GF+ SKAD SLF
Sbjct: 860 EVYMKQPPGYEDSSLPGYVCKLDKALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSLFF 919
Query: 571 RVSPNSXXXXXXXXXXXXITGNSDLQVTSLIDALNHFFPIKDLGKLHYFLGVEIHYTKDG 392
+ +T + V +L+ L F +KDLG LHYFLG+E+ G
Sbjct: 920 YNKGDLIIFVLIYVDDIIVTSSRQEAVPALLRDLQKEFALKDLGDLHYFLGIEVTKVSGG 979
Query: 391 MLLSQKRYAQDLLRKVQMTGSRGXXXXXXXXXXXSKFQGNP--SVDGQLYRQVVGSLQYL 218
++L+Q +Y DLLR+V M + S +G+P D YR VVG+LQYL
Sbjct: 980 IVLTQDKYVNDLLRRVNMFDCKPVSTPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYL 1039
Query: 217 TITRPEITFAVNKLSQFMQNPLDLHWKAMKRLLRYISGTLDLGLQLFKSPHLHVTGFSDS 38
T+TRP+I F VNK+ QF+ P HW A+KR+LRY+ LGL+L KS + V+ +SD+
Sbjct: 1040 TLTRPDIAFPVNKVCQFLHAPTTHHWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDA 1099
Query: 37 DWASDPDDRKST 2
DWA DDR+ST
Sbjct: 1100 DWAGSLDDRRST 1111
Score = 152 bits (384), Expect(2) = 6e-89
Identities = 70/113 (61%), Positives = 88/113 (77%)
Frame = -2
Query: 1091 NRWKEAMAKEYEALQKNKTWTITNLPPGRNVIGCRWVFKIKRNADGSVSRYKARLVAKGY 912
N WK+AM E+ ALQ NKTW + GRNVI C+WV+KIKR DGS+ RYKARLVAKG+
Sbjct: 749 NNWKKAMDAEFMALQNNKTWHLVPPQKGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGF 808
Query: 911 TQIAGVDFTDVFSPVVKPTTARLILTIALSKGWILRQVDVDNAFLHGLLDKDV 753
Q G+D+ D FSPVVK T R+IL+IA+SKGW +RQ+DV NAFLHG+L+++V
Sbjct: 809 KQRYGIDYEDTFSPVVKAATIRIILSIAVSKGWCMRQLDVQNAFLHGVLEEEV 861