BLASTX nr result
ID: Rehmannia25_contig00025271
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00025271
(315 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ06247.1| hypothetical protein PRUPE_ppa004609mg [Prunus pe... 168 8e-40
ref|XP_002521193.1| conserved hypothetical protein [Ricinus comm... 167 1e-39
gb|EOY34562.1| Pentatricopeptide repeat-containing protein [Theo... 166 3e-39
ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containi... 166 3e-39
gb|ESW18802.1| hypothetical protein PHAVU_006G071400g [Phaseolus... 164 9e-39
emb|CBI15914.3| unnamed protein product [Vitis vinifera] 164 9e-39
ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containi... 164 9e-39
ref|XP_006348674.1| PREDICTED: pentatricopeptide repeat-containi... 164 1e-38
ref|XP_004296059.1| PREDICTED: uncharacterized protein LOC101292... 164 1e-38
gb|EXB37964.1| hypothetical protein L484_011688 [Morus notabilis] 163 2e-38
ref|XP_004239038.1| PREDICTED: pentatricopeptide repeat-containi... 163 2e-38
ref|XP_006488563.1| PREDICTED: pentatricopeptide repeat-containi... 162 6e-38
ref|XP_006425116.1| hypothetical protein CICLE_v10028251mg [Citr... 162 6e-38
ref|XP_002313976.1| ubiquitin family protein [Populus trichocarp... 162 6e-38
ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 158 6e-37
ref|XP_004143220.1| PREDICTED: uncharacterized protein LOC101207... 158 6e-37
ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containi... 156 2e-36
ref|XP_004500294.1| PREDICTED: pentatricopeptide repeat-containi... 149 3e-34
ref|XP_002879249.1| ubiquitin family protein [Arabidopsis lyrata... 134 1e-29
ref|NP_180571.3| pentatricopeptide repeat-containing protein [Ar... 132 5e-29
>gb|EMJ06247.1| hypothetical protein PRUPE_ppa004609mg [Prunus persica]
Length = 500
Score = 168 bits (425), Expect = 8e-40
Identities = 83/104 (79%), Positives = 91/104 (87%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYLIAMTAVVKELNE AKALRKLKGFT+AGL+AE D +NVGLIE YQ DLL+ G+ LS
Sbjct: 267 VYSYLIAMTAVVKELNELAKALRKLKGFTRAGLIAEFDTENVGLIEKYQSDLLSDGVQLS 326
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
NWVI+EG SL GVVHERLLAMY+C+G G AERQLWEMKLVGK
Sbjct: 327 NWVIQEGSSSLHGVVHERLLAMYICSGHGLEAERQLWEMKLVGK 370
>ref|XP_002521193.1| conserved hypothetical protein [Ricinus communis]
gi|223539607|gb|EEF41193.1| conserved hypothetical
protein [Ricinus communis]
Length = 499
Score = 167 bits (424), Expect = 1e-39
Identities = 83/104 (79%), Positives = 91/104 (87%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYLIAMTAVVKELNEFAKALRKLKGF K+GL+AELD +N LIE YQ DL+ G+ LS
Sbjct: 266 VYSYLIAMTAVVKELNEFAKALRKLKGFAKSGLIAELDAENTRLIEKYQSDLIADGVCLS 325
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
+WVI+EG PSL GVVHERLLAMY+CAGRG AERQLWEMKLVGK
Sbjct: 326 SWVIQEGSPSLYGVVHERLLAMYICAGRGLDAERQLWEMKLVGK 369
>gb|EOY34562.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 504
Score = 166 bits (420), Expect = 3e-39
Identities = 81/104 (77%), Positives = 90/104 (86%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
+YSYLIAMTA+VKELNEFAKALRKLKGF ++GLVAELDM+NV LI+ YQ DLL GL LS
Sbjct: 271 IYSYLIAMTAIVKELNEFAKALRKLKGFARSGLVAELDMENVELIKKYQSDLLADGLRLS 330
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
NW I+EG SL G+VHERLLAMY+CAGRG AERQLWEMKL GK
Sbjct: 331 NWAIQEGTSSLFGLVHERLLAMYICAGRGLEAERQLWEMKLAGK 374
>ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Glycine max]
Length = 508
Score = 166 bits (420), Expect = 3e-39
Identities = 80/104 (76%), Positives = 91/104 (87%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
+YSYL+AMTAVVKELNEFAKALRKLKGFT+AGLVAELD+++V L E YQ D L G+ LS
Sbjct: 275 IYSYLVAMTAVVKELNEFAKALRKLKGFTRAGLVAELDLEDVELTEKYQSDTLADGVRLS 334
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
NWVI++G PSL G+VHERLLAMY+CAG G AERQLWEMKLVGK
Sbjct: 335 NWVIQDGSPSLHGIVHERLLAMYICAGHGIEAERQLWEMKLVGK 378
>gb|ESW18802.1| hypothetical protein PHAVU_006G071400g [Phaseolus vulgaris]
Length = 510
Score = 164 bits (416), Expect = 9e-39
Identities = 81/104 (77%), Positives = 90/104 (86%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYL+AMTAVVKELNEFAKALRKLK FT+AGLV ELD+++V L E YQ DLL G+ LS
Sbjct: 277 VYSYLVAMTAVVKELNEFAKALRKLKSFTRAGLVTELDLEDVELAEKYQTDLLADGVRLS 336
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
NWVI++G PSL GVVHERLLAMY+CAG G AERQLWEMKLVGK
Sbjct: 337 NWVIQDGRPSLYGVVHERLLAMYICAGHGIEAERQLWEMKLVGK 380
>emb|CBI15914.3| unnamed protein product [Vitis vinifera]
Length = 411
Score = 164 bits (416), Expect = 9e-39
Identities = 83/104 (79%), Positives = 91/104 (87%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYLIAMTAVVKELNEFAKALRKLKGFTK+GL+AELD +NV LIE YQ DLL G+ LS
Sbjct: 135 VYSYLIAMTAVVKELNEFAKALRKLKGFTKSGLIAELDAENVELIEKYQSDLLADGVRLS 194
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
+WVI+EG L GVV+ERLLAMY+CAGRG AERQLWEMKLVGK
Sbjct: 195 SWVIQEGRSPLHGVVYERLLAMYICAGRGLEAERQLWEMKLVGK 238
>ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic [Vitis vinifera]
Length = 511
Score = 164 bits (416), Expect = 9e-39
Identities = 83/104 (79%), Positives = 91/104 (87%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYLIAMTAVVKELNEFAKALRKLKGFTK+GL+AELD +NV LIE YQ DLL G+ LS
Sbjct: 278 VYSYLIAMTAVVKELNEFAKALRKLKGFTKSGLIAELDAENVELIEKYQSDLLADGVRLS 337
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
+WVI+EG L GVV+ERLLAMY+CAGRG AERQLWEMKLVGK
Sbjct: 338 SWVIQEGRSPLHGVVYERLLAMYICAGRGLEAERQLWEMKLVGK 381
>ref|XP_006348674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Solanum tuberosum]
Length = 503
Score = 164 bits (415), Expect = 1e-38
Identities = 80/104 (76%), Positives = 90/104 (86%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
+YSYLIAMTAVVKELNEF KALRKLKGF + GLVAELD++N+ LIE YQ DLL G+ LS
Sbjct: 270 LYSYLIAMTAVVKELNEFGKALRKLKGFARTGLVAELDLENLRLIEEYQADLLAEGVQLS 329
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
+W+I+EGGPSL GVVHERLLAMYVCAGRG AER LW+MKL GK
Sbjct: 330 DWLIQEGGPSLFGVVHERLLAMYVCAGRGIEAERHLWQMKLSGK 373
>ref|XP_004296059.1| PREDICTED: uncharacterized protein LOC101292395 [Fragaria vesca
subsp. vesca]
Length = 1304
Score = 164 bits (414), Expect = 1e-38
Identities = 81/104 (77%), Positives = 89/104 (85%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYLIAMTAVVKELNE KALRKLK FT+AGLVAE D ++VGLIE YQ DLL G+ LS
Sbjct: 261 VYSYLIAMTAVVKELNELGKALRKLKAFTRAGLVAEFDSEDVGLIEKYQSDLLADGVQLS 320
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
NWVI+EG +L GVVHERLLAMY+C+GRG AERQLWEMKLVGK
Sbjct: 321 NWVIQEGSSTLCGVVHERLLAMYICSGRGLEAERQLWEMKLVGK 364
>gb|EXB37964.1| hypothetical protein L484_011688 [Morus notabilis]
Length = 516
Score = 163 bits (413), Expect = 2e-38
Identities = 84/104 (80%), Positives = 90/104 (86%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYLIAMTAVVKELNEFAKALRKLKGF +AGL AELD ++V LIE YQ DLL G+ LS
Sbjct: 283 VYSYLIAMTAVVKELNEFAKALRKLKGFERAGLTAELDEESVELIEKYQSDLLDDGVRLS 342
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
NWVIEEG SL GVVHERLLAMY+CAGRG AERQLW+MKLVGK
Sbjct: 343 NWVIEEGITSLNGVVHERLLAMYICAGRGIEAERQLWKMKLVGK 386
>ref|XP_004239038.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Solanum lycopersicum]
Length = 503
Score = 163 bits (413), Expect = 2e-38
Identities = 79/104 (75%), Positives = 90/104 (86%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
+YSYLIAMTAVVKELNEF KALRKLKGF + GLVAELD++N+ LIE YQ DLL G+ LS
Sbjct: 270 LYSYLIAMTAVVKELNEFGKALRKLKGFARTGLVAELDLENLRLIEEYQADLLAEGVQLS 329
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
+W+I+EGGPSL GVVHERLLAMYVCAGRG AER LW+MK+ GK
Sbjct: 330 DWLIQEGGPSLFGVVHERLLAMYVCAGRGIEAERHLWQMKISGK 373
>ref|XP_006488563.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Citrus sinensis]
Length = 502
Score = 162 bits (409), Expect = 6e-38
Identities = 80/104 (76%), Positives = 88/104 (84%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYLIA+TAVVKELNEF KALRKLKG+ +AG +AELD N+GLIE YQ DLL G LS
Sbjct: 269 VYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLS 328
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
+W I+EGG SL GVVHERLLAMY+CAGRG AERQLWEMKLVGK
Sbjct: 329 SWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
>ref|XP_006425116.1| hypothetical protein CICLE_v10028251mg [Citrus clementina]
gi|557527050|gb|ESR38356.1| hypothetical protein
CICLE_v10028251mg [Citrus clementina]
Length = 502
Score = 162 bits (409), Expect = 6e-38
Identities = 80/104 (76%), Positives = 88/104 (84%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYLIA+TAVVKELNEF KALRKLKG+ +AG +AELD N+GLIE YQ DLL G LS
Sbjct: 269 VYSYLIALTAVVKELNEFGKALRKLKGYVRAGSIAELDGKNLGLIEKYQSDLLADGSRLS 328
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
+W I+EGG SL GVVHERLLAMY+CAGRG AERQLWEMKLVGK
Sbjct: 329 SWAIQEGGSSLYGVVHERLLAMYICAGRGLEAERQLWEMKLVGK 372
>ref|XP_002313976.1| ubiquitin family protein [Populus trichocarpa]
gi|222850384|gb|EEE87931.1| ubiquitin family protein
[Populus trichocarpa]
Length = 500
Score = 162 bits (409), Expect = 6e-38
Identities = 77/104 (74%), Positives = 92/104 (88%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
+Y+YLIAMTAVVKELNEF+KALRKLKG++++G+V ELD +NV L+E YQ DLL G+ LS
Sbjct: 267 IYAYLIAMTAVVKELNEFSKALRKLKGYSRSGMVTELDAENVELVEKYQSDLLADGVCLS 326
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
+WVI+EG P+L GVVHERLLAMY+CAGRG AERQLWEMKLVGK
Sbjct: 327 SWVIQEGSPALYGVVHERLLAMYICAGRGLDAERQLWEMKLVGK 370
>ref|XP_004168796.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g30100, chloroplastic-like [Cucumis sativus]
Length = 501
Score = 158 bits (400), Expect = 6e-37
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYLIAMTAVVKELNEFAKALRKLKG+ + G VAELD +NV L+ YQ +LL G+ LS
Sbjct: 268 VYSYLIAMTAVVKELNEFAKALRKLKGYARDGFVAELDKNNVELVAKYQTELLADGVQLS 327
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
NWV+EEG S+ GVVHERLLAMY+CAG+G AERQLWEMKLVGK
Sbjct: 328 NWVLEEGSSSIRGVVHERLLAMYICAGQGVEAERQLWEMKLVGK 371
>ref|XP_004143220.1| PREDICTED: uncharacterized protein LOC101207176 [Cucumis sativus]
Length = 1290
Score = 158 bits (400), Expect = 6e-37
Identities = 78/104 (75%), Positives = 88/104 (84%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYLIAMTAVVKELNEFAKALRKLKG+ + G VAELD +NV L+ YQ +LL G+ LS
Sbjct: 268 VYSYLIAMTAVVKELNEFAKALRKLKGYARDGFVAELDKNNVELVAKYQTELLADGVQLS 327
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
NWV+EEG S+ GVVHERLLAMY+CAG+G AERQLWEMKLVGK
Sbjct: 328 NWVLEEGSSSIRGVVHERLLAMYICAGQGVEAERQLWEMKLVGK 371
>ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Glycine max]
Length = 510
Score = 156 bits (395), Expect = 2e-36
Identities = 75/104 (72%), Positives = 87/104 (83%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
VYSYL+AMTAVVKELNE AKALRKLK F + GLVAELD+++V L E YQ DLL G+ LS
Sbjct: 277 VYSYLVAMTAVVKELNELAKALRKLKSFARTGLVAELDLEDVELTEKYQSDLLGDGVRLS 336
Query: 182 NWVIEEGGPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
NW I++G PSL G++HERLLAMY+CAG G AE+QLWEMKLVGK
Sbjct: 337 NWAIQDGSPSLHGIIHERLLAMYICAGHGIEAEKQLWEMKLVGK 380
>ref|XP_004500294.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Cicer arietinum]
Length = 508
Score = 149 bits (377), Expect = 3e-34
Identities = 72/105 (68%), Positives = 86/105 (81%), Gaps = 1/105 (0%)
Frame = +2
Query: 2 VYSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLS 181
+YSYL+AMTAVVKELNE AKALRKLK F++AGL+ E D ++V L E YQ DLL G LS
Sbjct: 274 IYSYLVAMTAVVKELNELAKALRKLKSFSRAGLITEFDREDVELAEKYQSDLLADGARLS 333
Query: 182 NWVIEEGGPSLL-GVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
WVI++G PS + G++HERLLAMY+CAGRG AERQLWEMKL+GK
Sbjct: 334 KWVIQDGSPSSIHGIIHERLLAMYICAGRGIEAERQLWEMKLLGK 378
>ref|XP_002879249.1| ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297325088|gb|EFH55508.1| ubiquitin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 900
Score = 134 bits (337), Expect = 1e-29
Identities = 66/105 (62%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
Frame = +2
Query: 5 YSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLSN 184
YSYLIAMTA+VKELN K LR+LK FT+AG VAE+D + LIE YQ + L+ GL L+
Sbjct: 272 YSYLIAMTAIVKELNSLGKTLRELKRFTRAGFVAEIDDHDRVLIEKYQSETLSRGLQLAT 331
Query: 185 WVIEEG--GPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
W +EEG S++GVVHERLLAMY+CAGRG AE+QLW+MKL G+
Sbjct: 332 WAVEEGQENDSIIGVVHERLLAMYICAGRGPEAEKQLWKMKLAGR 376
>ref|NP_180571.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546771|sp|Q0WNN7.2|PP176_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g30100, chloroplastic; Flags: Precursor
gi|330253250|gb|AEC08344.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 503
Score = 132 bits (332), Expect = 5e-29
Identities = 65/105 (61%), Positives = 80/105 (76%), Gaps = 2/105 (1%)
Frame = +2
Query: 5 YSYLIAMTAVVKELNEFAKALRKLKGFTKAGLVAELDMDNVGLIENYQQDLLTYGLHLSN 184
YSYLIAMTA+VKELN K LR+LK F +AG VAE+D + LIE YQ + L+ GL L+
Sbjct: 269 YSYLIAMTAIVKELNSLGKTLRELKRFARAGFVAEIDDHDRVLIEKYQSETLSRGLQLAT 328
Query: 185 WVIEEG--GPSLLGVVHERLLAMYVCAGRGSAAERQLWEMKLVGK 313
W +EEG S++GVVHERLLAMY+CAGRG AE+QLW+MKL G+
Sbjct: 329 WAVEEGQENDSIIGVVHERLLAMYICAGRGPEAEKQLWKMKLAGR 373