BLASTX nr result
ID: Rehmannia25_contig00025192
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00025192
(406 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 79 5e-13
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera] 79 5e-13
gb|EOY32048.1| DNA ligase IV [Theobroma cacao] 75 9e-12
ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycope... 74 2e-11
ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Sol... 73 3e-11
ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Sol... 73 3e-11
ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Sol... 73 3e-11
gb|EMJ26403.1| hypothetical protein PRUPE_ppa002057mg [Prunus pe... 71 2e-10
ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Gly... 70 4e-10
ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Gly... 70 4e-10
ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Gly... 70 4e-10
ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Gly... 70 4e-10
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Gly... 70 4e-10
ref|XP_004297907.1| PREDICTED: DNA ligase 4-like [Fragaria vesca... 69 9e-10
ref|XP_002534602.1| conserved hypothetical protein [Ricinus comm... 67 2e-09
ref|XP_006282195.1| hypothetical protein CARUB_v10028461mg [Caps... 65 9e-09
ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA... 65 1e-08
ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [S... 63 5e-08
ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum] 62 1e-07
tpg|DAA36121.1| TPA: hypothetical protein ZEAMMB73_820524 [Zea m... 61 1e-07
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/77 (51%), Positives = 51/77 (66%)
Frame = +1
Query: 46 DRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLDAGTQPVK 225
++LE VDP+QAMLL+M+PSL KK ES P+ ++ K P++ G +PVK
Sbjct: 1099 EKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKP------------PVEQGAEPVK 1146
Query: 226 KKKVSYKDVANELLKDW 276
KKKVSYKDVA LLKDW
Sbjct: 1147 KKKVSYKDVAGALLKDW 1163
>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/77 (51%), Positives = 51/77 (66%)
Frame = +1
Query: 46 DRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLDAGTQPVK 225
++LE VDP+QAMLL+M+PSL KK ES P+ ++ K P++ G +PVK
Sbjct: 1098 EKLEVMVDPVQAMLLDMIPSLGVKKAESTNPIIDDEKP------------PVEQGAEPVK 1145
Query: 226 KKKVSYKDVANELLKDW 276
KKKVSYKDVA LLKDW
Sbjct: 1146 KKKVSYKDVAGALLKDW 1162
>gb|EOY32048.1| DNA ligase IV [Theobroma cacao]
Length = 1195
Score = 75.1 bits (183), Expect = 9e-12
Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Frame = +1
Query: 46 DRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKA----RDPVPDLGEGKLPLDAGT 213
++LE VDP+QAMLL+M+PSL K VE+ E K +P + + KL D
Sbjct: 1115 EKLEVMVDPVQAMLLDMIPSLGIKHVEATNSFVENEKPPADNNAEIPVVEDYKLDADFIA 1174
Query: 214 QPVKKKKVSYKDVANELLKDW 276
PVKKKKVSYKDVA ELLKDW
Sbjct: 1175 PPVKKKKVSYKDVAGELLKDW 1195
>ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycopersicum]
Length = 1172
Score = 73.9 bits (180), Expect = 2e-11
Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Frame = +1
Query: 4 NEVGYGLGSSTQYKDR----LEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPV 171
+E YG G+ + KD+ LED VDP+QAMLL+M+P L +K S + +D
Sbjct: 1090 HETSYGSGNIARGKDKVDEKLEDPVDPVQAMLLHMIPHLDSKPTRSI-----DTLVKDDK 1144
Query: 172 PDLGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 276
PD D P KKKK+SYKDVA ELLKDW
Sbjct: 1145 PDA-------DTNPSPKKKKKISYKDVAGELLKDW 1172
>ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Solanum tuberosum]
Length = 1119
Score = 73.2 bits (178), Expect = 3e-11
Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +1
Query: 7 EVGYGLGSSTQYKDR---LEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPD 177
E YG G+ + KD+ LED VDP+QAMLL+M+P L +K S + +D P+
Sbjct: 1039 ETSYGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSV-----DTLVKDDKPE 1093
Query: 178 LGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 276
D P KKKKVSYKDVA ELLKDW
Sbjct: 1094 A-------DTNPSPKKKKKVSYKDVAGELLKDW 1119
>ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Solanum tuberosum]
Length = 1171
Score = 73.2 bits (178), Expect = 3e-11
Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +1
Query: 7 EVGYGLGSSTQYKDR---LEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPD 177
E YG G+ + KD+ LED VDP+QAMLL+M+P L +K S + +D P+
Sbjct: 1091 ETSYGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSV-----DTLVKDDKPE 1145
Query: 178 LGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 276
D P KKKKVSYKDVA ELLKDW
Sbjct: 1146 A-------DTNPSPKKKKKVSYKDVAGELLKDW 1171
>ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Solanum tuberosum]
Length = 1172
Score = 73.2 bits (178), Expect = 3e-11
Identities = 43/93 (46%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Frame = +1
Query: 7 EVGYGLGSSTQYKDR---LEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPD 177
E YG G+ + KD+ LED VDP+QAMLL+M+P L +K S + +D P+
Sbjct: 1092 ETSYGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSV-----DTLVKDDKPE 1146
Query: 178 LGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 276
D P KKKKVSYKDVA ELLKDW
Sbjct: 1147 A-------DTNPSPKKKKKVSYKDVAGELLKDW 1172
>gb|EMJ26403.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
Length = 723
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = +1
Query: 46 DRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLDAGTQPVK 225
++LE DP+QAML +M+PSLA KKVE+ E+ K P DL G P K
Sbjct: 659 EKLEVMADPVQAMLFDMIPSLAMKKVETTNTSIEKEK---PAVDLNAG---------PSK 706
Query: 226 KKKVSYKDVANELLKDW 276
KKKVSYKDVA ELLKDW
Sbjct: 707 KKKVSYKDVAGELLKDW 723
>ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Glycine max]
Length = 939
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +1
Query: 31 STQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLP---- 198
+ + ++LE + DP+QAML +M+PSLAT+KVE P+ V+ E KLP
Sbjct: 865 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQ--PMNRSVR---------EEKLPETSN 913
Query: 199 LDAGTQPVKKKKVSYKDVANELLKDW 276
+A KKKKVSYKDVA+ELLKDW
Sbjct: 914 AEAEPMTTKKKKVSYKDVASELLKDW 939
>ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Glycine max]
Length = 955
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +1
Query: 31 STQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLP---- 198
+ + ++LE + DP+QAML +M+PSLAT+KVE P+ V+ E KLP
Sbjct: 881 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQ--PMNRSVR---------EEKLPETSN 929
Query: 199 LDAGTQPVKKKKVSYKDVANELLKDW 276
+A KKKKVSYKDVA+ELLKDW
Sbjct: 930 AEAEPMTTKKKKVSYKDVASELLKDW 955
>ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Glycine max]
Length = 1011
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +1
Query: 31 STQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLP---- 198
+ + ++LE + DP+QAML +M+PSLAT+KVE P+ V+ E KLP
Sbjct: 937 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQ--PMNRSVR---------EEKLPETSN 985
Query: 199 LDAGTQPVKKKKVSYKDVANELLKDW 276
+A KKKKVSYKDVA+ELLKDW
Sbjct: 986 AEAEPMTTKKKKVSYKDVASELLKDW 1011
>ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Glycine max]
Length = 1104
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +1
Query: 31 STQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLP---- 198
+ + ++LE + DP+QAML +M+PSLAT+KVE P+ V+ E KLP
Sbjct: 1030 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQ--PMNRSVR---------EEKLPETSN 1078
Query: 199 LDAGTQPVKKKKVSYKDVANELLKDW 276
+A KKKKVSYKDVA+ELLKDW
Sbjct: 1079 AEAEPMTTKKKKVSYKDVASELLKDW 1104
>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Glycine max]
Length = 1171
Score = 69.7 bits (169), Expect = 4e-10
Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +1
Query: 31 STQYKDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLP---- 198
+ + ++LE + DP+QAML +M+PSLAT+KVE P+ V+ E KLP
Sbjct: 1097 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQ--PMNRSVR---------EEKLPETSN 1145
Query: 199 LDAGTQPVKKKKVSYKDVANELLKDW 276
+A KKKKVSYKDVA+ELLKDW
Sbjct: 1146 AEAEPMTTKKKKVSYKDVASELLKDW 1171
>ref|XP_004297907.1| PREDICTED: DNA ligase 4-like [Fragaria vesca subsp. vesca]
Length = 1188
Score = 68.6 bits (166), Expect = 9e-10
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 14/92 (15%)
Frame = +1
Query: 43 KDRLEDTVDPIQAMLLNMVPSLATKKVESA-IPVTEEVKARDPVPDLG------------ 183
K++LE DP+QAMLL ++PSL TK ++ + + E D +P G
Sbjct: 1097 KEKLEVNDDPVQAMLLGLIPSLGTKNAQTMKMSIESEKPPVDLIPSHGKKNVQTTSHTSA 1156
Query: 184 -EGKLPLDAGTQPVKKKKVSYKDVANELLKDW 276
+ K P D +P KKKKVSYKD+A++LLKDW
Sbjct: 1157 EDDKPPCDIVAEPTKKKKVSYKDLASQLLKDW 1188
>ref|XP_002534602.1| conserved hypothetical protein [Ricinus communis]
gi|223524943|gb|EEF27780.1| conserved hypothetical
protein [Ricinus communis]
Length = 251
Score = 67.4 bits (163), Expect = 2e-09
Identities = 41/77 (53%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 46 DRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVK-ARDPVPDLGEGKLPLDAGTQPV 222
D+LE VDPI AMLL+M+PSL + VE + V E K A DP QPV
Sbjct: 188 DKLEIMVDPIHAMLLDMIPSLGVRNVEISNQVFEREKPAGDPT-------------AQPV 234
Query: 223 KKKKVSYKDVANELLKD 273
KKKKVSYKDVA+E+LKD
Sbjct: 235 KKKKVSYKDVASEMLKD 251
>ref|XP_006282195.1| hypothetical protein CARUB_v10028461mg [Capsella rubella]
gi|482550899|gb|EOA15093.1| hypothetical protein
CARUB_v10028461mg [Capsella rubella]
Length = 1203
Score = 65.1 bits (157), Expect = 9e-09
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 16/94 (17%)
Frame = +1
Query: 43 KDRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDL-GEGKLPLDAGTQ- 216
K++L+ DP+QAML+NM+PSL+ K E++ +T E + D D K L A T
Sbjct: 1110 KEKLQIHEDPLQAMLMNMIPSLSQKNTETSNRITGENRTADVYGDCESSEKRKLGAETDN 1169
Query: 217 --------------PVKKKKVSYKDVANELLKDW 276
PVKKKKVSY+DVA LLKDW
Sbjct: 1170 TPVTADAEADTVPPPVKKKKVSYRDVAGALLKDW 1203
>ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like [Setaria
italica]
Length = 1241
Score = 64.7 bits (156), Expect = 1e-08
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 17/94 (18%)
Frame = +1
Query: 46 DRLEDTVDPIQAMLLNMVPSLATKKVESA--IPVTEEVKARDP-------------VPDL 180
+++E VDP+ AMLL+M+P+L+ + E A +P V+ P VPD
Sbjct: 1148 EKIEQMVDPLHAMLLDMIPTLSQTRTEGASRVPPPTIVEKAPPGVGSNTSKSSDILVPDA 1207
Query: 181 GEGKLPLDA--GTQPVKKKKVSYKDVANELLKDW 276
G +P P KKKKVSYKDVA+ELLKDW
Sbjct: 1208 GTSGVPAPDPNAAPPPKKKKVSYKDVASELLKDW 1241
>ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [Sorghum bicolor]
gi|241939668|gb|EES12813.1| hypothetical protein
SORBIDRAFT_06g027820 [Sorghum bicolor]
Length = 1164
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/92 (41%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Frame = +1
Query: 46 DRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDP-------------VPDLGE 186
D++E DP+ AMLL+M+P L K E A +DP PD G
Sbjct: 1073 DKIEQMADPLHAMLLDMLPLLGKKGTEDASRAPLPKAEKDPPAGGSSTSNSEILAPDAGT 1132
Query: 187 GKLPLDA--GTQPVKKKKVSYKDVANELLKDW 276
+P P KKKKVSYKDVA+ELLKDW
Sbjct: 1133 SGVPAPDPNAAPPPKKKKVSYKDVASELLKDW 1164
>ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]
Length = 1168
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/77 (45%), Positives = 49/77 (63%)
Frame = +1
Query: 46 DRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDPVPDLGEGKLPLDAGTQPVK 225
++LE DP+QAMLL+M+PSLAT+KVE P+ V+ P P++ + K
Sbjct: 1101 EKLEILTDPVQAMLLDMIPSLATEKVEQ--PLNSYVEEEKP-PEISNEE------PSTSK 1151
Query: 226 KKKVSYKDVANELLKDW 276
KKKVS+K +A +LLKDW
Sbjct: 1152 KKKVSFKAIAGDLLKDW 1168
>tpg|DAA36121.1| TPA: hypothetical protein ZEAMMB73_820524 [Zea mays]
Length = 147
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Frame = +1
Query: 46 DRLEDTVDPIQAMLLNMVPSLATKKVESAIPVTEEVKARDP-------------VPDLGE 186
+++E DP+ AMLL+M+P L K+ E +DP +PD G
Sbjct: 57 EKIEQMADPLHAMLLDMLPLLGQKRTEDTSKAPLAKAEKDPPAIGSSTSNSEILLPDAGT 116
Query: 187 GKLPL-DAGTQPVKKKKVSYKDVANELLKDW 276
+P + P KKKKVSY+DV +ELLKDW
Sbjct: 117 SGVPAPEPSAAPPKKKKVSYRDVVSELLKDW 147