BLASTX nr result
ID: Rehmannia25_contig00025191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00025191
(500 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17913.3| unnamed protein product [Vitis vinifera] 73 3e-11
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera] 73 3e-11
ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Sol... 70 3e-10
ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Sol... 70 3e-10
ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Sol... 70 3e-10
ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycope... 69 5e-10
gb|EOY32048.1| DNA ligase IV [Theobroma cacao] 67 2e-09
gb|EMJ26403.1| hypothetical protein PRUPE_ppa002057mg [Prunus pe... 67 2e-09
ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Gly... 66 4e-09
ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Gly... 66 4e-09
ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Gly... 66 4e-09
ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Gly... 66 4e-09
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Gly... 66 4e-09
ref|XP_002534602.1| conserved hypothetical protein [Ricinus comm... 60 2e-07
ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA... 60 3e-07
ref|XP_006282195.1| hypothetical protein CARUB_v10028461mg [Caps... 58 1e-06
ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum] 58 2e-06
gb|ESW10764.1| hypothetical protein PHAVU_009G235800g [Phaseolus... 57 3e-06
ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4... 56 4e-06
ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus] 56 4e-06
>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 73.2 bits (178), Expect = 3e-11
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = -1
Query: 455 DRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLPLDAGTQPVK 276
++LE +DP+QAMLL+M+PSL KK ES + + K P++ G +PVK
Sbjct: 1099 EKLEVMVDPVQAMLLDMIPSLGVKKAESTNPI------------IDDEKPPVEQGAEPVK 1146
Query: 275 KKKVSYKDVANELLKDW 225
KKKVSYKDVA LLKDW
Sbjct: 1147 KKKVSYKDVAGALLKDW 1163
>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 73.2 bits (178), Expect = 3e-11
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = -1
Query: 455 DRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLPLDAGTQPVK 276
++LE +DP+QAMLL+M+PSL KK ES + + K P++ G +PVK
Sbjct: 1098 EKLEVMVDPVQAMLLDMIPSLGVKKAESTNPI------------IDDEKPPVEQGAEPVK 1145
Query: 275 KKKVSYKDVANELLKDW 225
KKKVSYKDVA LLKDW
Sbjct: 1146 KKKVSYKDVAGALLKDW 1162
>ref|XP_006344528.1| PREDICTED: DNA ligase 4-like isoform X3 [Solanum tuberosum]
Length = 1119
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = -1
Query: 494 EVGYGQGTSTQYKDR---LEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPA 324
E YG G + KD+ LED +DP+QAMLL+M+P L +K S
Sbjct: 1039 ETSYGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSVDTL------------ 1086
Query: 323 LGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 225
+ + K D P KKKKVSYKDVA ELLKDW
Sbjct: 1087 VKDDKPEADTNPSPKKKKKVSYKDVAGELLKDW 1119
>ref|XP_006344527.1| PREDICTED: DNA ligase 4-like isoform X2 [Solanum tuberosum]
Length = 1171
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = -1
Query: 494 EVGYGQGTSTQYKDR---LEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPA 324
E YG G + KD+ LED +DP+QAMLL+M+P L +K S
Sbjct: 1091 ETSYGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSVDTL------------ 1138
Query: 323 LGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 225
+ + K D P KKKKVSYKDVA ELLKDW
Sbjct: 1139 VKDDKPEADTNPSPKKKKKVSYKDVAGELLKDW 1171
>ref|XP_006344526.1| PREDICTED: DNA ligase 4-like isoform X1 [Solanum tuberosum]
Length = 1172
Score = 70.1 bits (170), Expect = 3e-10
Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = -1
Query: 494 EVGYGQGTSTQYKDR---LEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPA 324
E YG G + KD+ LED +DP+QAMLL+M+P L +K S
Sbjct: 1092 ETSYGSGNIARGKDKVDELEDPVDPVQAMLLHMIPHLDSKPTRSVDTL------------ 1139
Query: 323 LGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 225
+ + K D P KKKKVSYKDVA ELLKDW
Sbjct: 1140 VKDDKPEADTNPSPKKKKKVSYKDVAGELLKDW 1172
>ref|XP_004242917.1| PREDICTED: DNA ligase 4-like [Solanum lycopersicum]
Length = 1172
Score = 69.3 bits (168), Expect = 5e-10
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = -1
Query: 497 NEVGYGQGTSTQYKDR----LEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXX 330
+E YG G + KD+ LED +DP+QAMLL+M+P L +K S
Sbjct: 1090 HETSYGSGNIARGKDKVDEKLEDPVDPVQAMLLHMIPHLDSKPTRSIDTL---------- 1139
Query: 329 PALGEGKLPLDAGTQPVKKKKVSYKDVANELLKDW 225
+ + K D P KKKK+SYKDVA ELLKDW
Sbjct: 1140 --VKDDKPDADTNPSPKKKKKISYKDVAGELLKDW 1172
>gb|EOY32048.1| DNA ligase IV [Theobroma cacao]
Length = 1195
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Frame = -1
Query: 455 DRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPA----LGEGKLPLDAGT 288
++LE +DP+QAMLL+M+PSL K +E+ A + + KL D
Sbjct: 1115 EKLEVMVDPVQAMLLDMIPSLGIKHVEATNSFVENEKPPADNNAEIPVVEDYKLDADFIA 1174
Query: 287 QPVKKKKVSYKDVANELLKDW 225
PVKKKKVSYKDVA ELLKDW
Sbjct: 1175 PPVKKKKVSYKDVAGELLKDW 1195
>gb|EMJ26403.1| hypothetical protein PRUPE_ppa002057mg [Prunus persica]
Length = 723
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/77 (46%), Positives = 47/77 (61%)
Frame = -1
Query: 455 DRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLPLDAGTQPVK 276
++LE DP+QAML +M+PSLA KK+E+ ++ + K +D P K
Sbjct: 659 EKLEVMADPVQAMLFDMIPSLAMKKVETTNT------------SIEKEKPAVDLNAGPSK 706
Query: 275 KKKVSYKDVANELLKDW 225
KKKVSYKDVA ELLKDW
Sbjct: 707 KKKVSYKDVAGELLKDW 723
>ref|XP_006597804.1| PREDICTED: DNA ligase 4-like isoform X5 [Glycine max]
Length = 939
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = -1
Query: 470 STQYKDRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLP---- 303
+ + ++LE + DP+QAML +M+PSLAT+K+E ++ E KLP
Sbjct: 865 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNR-----------SVREEKLPETSN 913
Query: 302 LDAGTQPVKKKKVSYKDVANELLKDW 225
+A KKKKVSYKDVA+ELLKDW
Sbjct: 914 AEAEPMTTKKKKVSYKDVASELLKDW 939
>ref|XP_006597803.1| PREDICTED: DNA ligase 4-like isoform X4 [Glycine max]
Length = 955
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = -1
Query: 470 STQYKDRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLP---- 303
+ + ++LE + DP+QAML +M+PSLAT+K+E ++ E KLP
Sbjct: 881 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNR-----------SVREEKLPETSN 929
Query: 302 LDAGTQPVKKKKVSYKDVANELLKDW 225
+A KKKKVSYKDVA+ELLKDW
Sbjct: 930 AEAEPMTTKKKKVSYKDVASELLKDW 955
>ref|XP_006597802.1| PREDICTED: DNA ligase 4-like isoform X3 [Glycine max]
Length = 1011
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = -1
Query: 470 STQYKDRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLP---- 303
+ + ++LE + DP+QAML +M+PSLAT+K+E ++ E KLP
Sbjct: 937 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNR-----------SVREEKLPETSN 985
Query: 302 LDAGTQPVKKKKVSYKDVANELLKDW 225
+A KKKKVSYKDVA+ELLKDW
Sbjct: 986 AEAEPMTTKKKKVSYKDVASELLKDW 1011
>ref|XP_006597801.1| PREDICTED: DNA ligase 4-like isoform X2 [Glycine max]
Length = 1104
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = -1
Query: 470 STQYKDRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLP---- 303
+ + ++LE + DP+QAML +M+PSLAT+K+E ++ E KLP
Sbjct: 1030 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNR-----------SVREEKLPETSN 1078
Query: 302 LDAGTQPVKKKKVSYKDVANELLKDW 225
+A KKKKVSYKDVA+ELLKDW
Sbjct: 1079 AEAEPMTTKKKKVSYKDVASELLKDW 1104
>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like isoform X1 [Glycine max]
Length = 1171
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = -1
Query: 470 STQYKDRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLP---- 303
+ + ++LE + DP+QAML +M+PSLAT+K+E ++ E KLP
Sbjct: 1097 NNEVTEKLEISADPLQAMLFDMIPSLATQKVEQPMNR-----------SVREEKLPETSN 1145
Query: 302 LDAGTQPVKKKKVSYKDVANELLKDW 225
+A KKKKVSYKDVA+ELLKDW
Sbjct: 1146 AEAEPMTTKKKKVSYKDVASELLKDW 1171
>ref|XP_002534602.1| conserved hypothetical protein [Ricinus communis]
gi|223524943|gb|EEF27780.1| conserved hypothetical
protein [Ricinus communis]
Length = 251
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = -1
Query: 455 DRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLPL-DAGTQPV 279
D+LE +DPI AMLL+M+PSL + +E + E + P D QPV
Sbjct: 188 DKLEIMVDPIHAMLLDMIPSLGVRNVEISNQVF-------------EREKPAGDPTAQPV 234
Query: 278 KKKKVSYKDVANELLKD 228
KKKKVSYKDVA+E+LKD
Sbjct: 235 KKKKVSYKDVASEMLKD 251
>ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like [Setaria
italica]
Length = 1241
Score = 60.1 bits (144), Expect = 3e-07
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 17/100 (17%)
Frame = -1
Query: 473 TSTQYKDRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGK----- 309
TS+ +++E +DP+ AMLL+M+P+L+ + E A P +G
Sbjct: 1142 TSSVPGEKIEQMVDPLHAMLLDMIPTLSQTRTEGASRVPPPTIVEKAPPGVGSNTSKSSD 1201
Query: 308 -LPLDAGTQ-----------PVKKKKVSYKDVANELLKDW 225
L DAGT P KKKKVSYKDVA+ELLKDW
Sbjct: 1202 ILVPDAGTSGVPAPDPNAAPPPKKKKVSYKDVASELLKDW 1241
>ref|XP_006282195.1| hypothetical protein CARUB_v10028461mg [Capsella rubella]
gi|482550899|gb|EOA15093.1| hypothetical protein
CARUB_v10028461mg [Capsella rubella]
Length = 1203
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Frame = -1
Query: 500 INEVGYGQGTSTQYKDRLEDTLDPIQAMLLNMVPSLATKKIES----------AXXXXXX 351
+ E + T K++L+ DP+QAML+NM+PSL+ K E+ A
Sbjct: 1096 VEEASRNEKTDMDMKEKLQIHEDPLQAMLMNMIPSLSQKNTETSNRITGENRTADVYGDC 1155
Query: 350 XXXXXXXPALGEGKLPLDAGTQ------PVKKKKVSYKDVANELLKDW 225
P+ A + PVKKKKVSY+DVA LLKDW
Sbjct: 1156 ESSEKRKLGAETDNTPVTADAEADTVPPPVKKKKVSYRDVAGALLKDW 1203
>ref|XP_004487997.1| PREDICTED: DNA ligase 4-like [Cicer arietinum]
Length = 1168
Score = 57.8 bits (138), Expect = 2e-06
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = -1
Query: 455 DRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLPLDAGTQP-- 282
++LE DP+QAMLL+M+PSLAT+K+E + E K P + +P
Sbjct: 1101 EKLEILTDPVQAMLLDMIPSLATEKVEQPLNSY-----------VEEEKPPEISNEEPST 1149
Query: 281 VKKKKVSYKDVANELLKDW 225
KKKKVS+K +A +LLKDW
Sbjct: 1150 SKKKKVSFKAIAGDLLKDW 1168
>gb|ESW10764.1| hypothetical protein PHAVU_009G235800g [Phaseolus vulgaris]
Length = 1172
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = -1
Query: 488 GYGQGTSTQYKDRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGK 309
G+ + ++LE + DP+QAML +M+PSL KK E ++ E K
Sbjct: 1092 GHNNDQNNVVIEKLEFSADPLQAMLFDMIPSLGPKKAEQ-----------PMNLSVREEK 1140
Query: 308 LP--LDAGTQP--VKKKKVSYKDVANELLKDW 225
+P +A T+P KK KVS+ D AN+LLKDW
Sbjct: 1141 VPEASNAATEPTTTKKNKVSFMDAANDLLKDW 1172
>ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4-like, partial [Cucumis
sativus]
Length = 918
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/82 (41%), Positives = 44/82 (53%)
Frame = -1
Query: 470 STQYKDRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLPLDAG 291
S + ++LE DP++AMLL+MVPSL +S+ + E K P
Sbjct: 843 SVEKPEKLEVMKDPLEAMLLDMVPSLGMSGTKSSISSSSSSS------TVVEEKKPFVEN 896
Query: 290 TQPVKKKKVSYKDVANELLKDW 225
KKKVSYKDVA+ELLKDW
Sbjct: 897 KSEAVKKKVSYKDVASELLKDW 918
>ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
Length = 1214
Score = 56.2 bits (134), Expect = 4e-06
Identities = 34/82 (41%), Positives = 44/82 (53%)
Frame = -1
Query: 470 STQYKDRLEDTLDPIQAMLLNMVPSLATKKIESAXXXXXXXXXXXXXPALGEGKLPLDAG 291
S + ++LE DP++AMLL+MVPSL +S+ + E K P
Sbjct: 1139 SVEKPEKLEVMKDPLEAMLLDMVPSLGMSGTKSSISSSSSSS------TVVEEKKPFVEN 1192
Query: 290 TQPVKKKKVSYKDVANELLKDW 225
KKKVSYKDVA+ELLKDW
Sbjct: 1193 KSEAVKKKVSYKDVASELLKDW 1214