BLASTX nr result
ID: Rehmannia25_contig00025173
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00025173
(458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 85 1e-14
ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
ref|XP_004289402.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
emb|CBI16090.3| unnamed protein product [Vitis vinifera] 74 2e-11
ref|XP_002520529.1| pentatricopeptide repeat-containing protein,... 74 2e-11
gb|EMJ09415.1| hypothetical protein PRUPE_ppa018916mg, partial [... 73 3e-11
ref|XP_002314162.2| hypothetical protein POPTR_0009s04000g, part... 73 5e-11
gb|EOY33964.1| Pentatricopeptide repeat superfamily protein [The... 72 6e-11
ref|XP_004240613.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_006846299.1| hypothetical protein AMTR_s00012p00252800 [A... 65 9e-09
ref|XP_006424891.1| hypothetical protein CICLE_v10030165mg, part... 62 1e-07
ref|XP_003545972.2| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_004516023.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_006843075.1| hypothetical protein AMTR_s02193p00008230, p... 57 3e-06
ref|XP_006836621.1| hypothetical protein AMTR_s00232p00000850 [A... 57 3e-06
ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vit... 57 3e-06
ref|XP_003567523.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|EMT17047.1| Pentatricopeptide repeat-containing protein [Aegi... 57 3e-06
>ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g11290-like [Cucumis sativus]
Length = 616
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AGF+NLG+GEEAL CF QMR+ +DFFT +S+ KA+ +SALEEGKQIH L +KT Y
Sbjct: 345 AGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYT 404
Query: 181 TNL 189
NL
Sbjct: 405 LNL 407
>ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 616
Score = 84.7 bits (208), Expect = 1e-14
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AGF+NLG+GEEAL CF QMR+ +DFFT +S+ KA+ +SALEEGKQIH L +KT Y
Sbjct: 345 AGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYT 404
Query: 181 TNL 189
NL
Sbjct: 405 LNL 407
>ref|XP_004289402.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Fragaria vesca subsp. vesca]
Length = 558
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/63 (58%), Positives = 47/63 (74%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AGF N+G EEAL CFS+MRQA + DFFT +S+L+A SAL EGK+IHAL FK+ +
Sbjct: 287 AGFCNIGSSEEALECFSEMRQAGVPADFFTFTSILRAAGTVSALVEGKKIHALIFKSGHA 346
Query: 181 TNL 189
+NL
Sbjct: 347 SNL 349
>ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = +1
Query: 4 GFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYIT 183
G SNLG GE AL CFS+MRQA + +D FT +SVL+A+ S L+EGKQIHAL K Y +
Sbjct: 358 GLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGS 417
Query: 184 NL 189
NL
Sbjct: 418 NL 419
>emb|CBI16090.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = +1
Query: 4 GFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYIT 183
G SNLG GE AL CFS+MRQA + +D FT +SVL+A+ S L+EGKQIHAL K Y +
Sbjct: 188 GLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGS 247
Query: 184 NL 189
NL
Sbjct: 248 NL 249
>ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540371|gb|EEF41942.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 606
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/64 (50%), Positives = 50/64 (78%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AG+SNLG+GE+AL CF +MR A++ +DF+T +S+L A+ A+EEG+++HAL KT Y
Sbjct: 335 AGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYA 394
Query: 181 TNLY 192
+++Y
Sbjct: 395 SSVY 398
>gb|EMJ09415.1| hypothetical protein PRUPE_ppa018916mg, partial [Prunus persica]
Length = 562
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AGFSN+G EEAL CFS MRQA +A +FFT +S+L+A+ S LE GK+IHAL FK+
Sbjct: 291 AGFSNIGSCEEALKCFSDMRQARIATNFFTFASILRAVGTLSDLEAGKKIHALIFKSGQA 350
Query: 181 TN 186
+N
Sbjct: 351 SN 352
>ref|XP_002314162.2| hypothetical protein POPTR_0009s04000g, partial [Populus
trichocarpa] gi|550330984|gb|EEE88117.2| hypothetical
protein POPTR_0009s04000g, partial [Populus trichocarpa]
Length = 606
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/63 (57%), Positives = 48/63 (76%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AG+S LG EEAL CF +M+QA + ID +TL+SV+ A+ NSS LEEGK +HAL +T YI
Sbjct: 331 AGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYI 390
Query: 181 TNL 189
++L
Sbjct: 391 SHL 393
>gb|EOY33964.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 623
Score = 72.4 bits (176), Expect = 6e-11
Identities = 36/64 (56%), Positives = 45/64 (70%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AGF NL ++A+ CF +MRQA + IDFFT +S+L A+ NSSALE GKQ+HAL KT
Sbjct: 352 AGFCNLSYDDKAMKCFVEMRQAGINIDFFTFTSMLGAIGNSSALEGGKQMHALILKTGNA 411
Query: 181 TNLY 192
N Y
Sbjct: 412 LNPY 415
>ref|XP_004240613.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Solanum lycopersicum]
Length = 536
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/63 (52%), Positives = 44/63 (69%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
+GFSNLGVG EA +CFS+MR+ +D +T +S+LKA+ S LEEG IH LA KT Y
Sbjct: 265 SGFSNLGVGGEAFSCFSRMRRYGFTVDHYTFASILKAIGCISGLEEGMLIHCLALKTGYA 324
Query: 181 TNL 189
+ +
Sbjct: 325 SEV 327
>ref|XP_006846299.1| hypothetical protein AMTR_s00012p00252800 [Amborella trichopoda]
gi|548849069|gb|ERN07974.1| hypothetical protein
AMTR_s00012p00252800 [Amborella trichopoda]
Length = 627
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AGF++LG GEE L F++M Q+ + DF+T S+L+A+ S LE GKQ HAL KT +
Sbjct: 329 AGFAHLGYGEEVLETFARMNQSLIKPDFYTFGSLLQAIGTLSTLEHGKQTHALVLKTGHF 388
Query: 181 TNLY 192
+N Y
Sbjct: 389 SNPY 392
>ref|XP_006424891.1| hypothetical protein CICLE_v10030165mg, partial [Citrus clementina]
gi|557526825|gb|ESR38131.1| hypothetical protein
CICLE_v10030165mg, partial [Citrus clementina]
Length = 465
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AGF NLG GE+AL CF +MRQA + ID+ T++S+ GKQ+HAL FK Y
Sbjct: 302 AGFCNLGSGEQALKCFCEMRQAGIDIDYCTVTSI------------GKQMHALIFKIGYD 349
Query: 181 TNLYQSGSGCFLRFVC 228
+N++ F+ +C
Sbjct: 350 SNVFVQNRLVFMYAIC 365
>ref|XP_003545972.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 930
Score = 58.2 bits (139), Expect = 1e-06
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = +1
Query: 7 FSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYITN 186
+S G GEEAL + QM+ AD+ D F SS+L A AN SA E+GKQ+H A K ++ +
Sbjct: 533 YSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCD 592
Query: 187 LYQSGS 204
++ S S
Sbjct: 593 IFASNS 598
>ref|XP_004516023.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Cicer arietinum]
Length = 925
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/66 (43%), Positives = 43/66 (65%)
Frame = +1
Query: 7 FSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYITN 186
+S G GEEAL + QM+ +D+ D F SS+L A AN SA E+GKQ+H A K ++++
Sbjct: 528 YSQYGDGEEALKLYLQMQVSDIKPDSFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSD 587
Query: 187 LYQSGS 204
++ S S
Sbjct: 588 IFASSS 593
>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWY 177
+GF+ G EEAL FSQM QA + + FT S + A AN++ +++GKQIHA+ KT Y
Sbjct: 590 SGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGY 648
>ref|XP_006843075.1| hypothetical protein AMTR_s02193p00008230, partial [Amborella
trichopoda] gi|548845281|gb|ERN04750.1| hypothetical
protein AMTR_s02193p00008230, partial [Amborella
trichopoda]
Length = 377
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/64 (46%), Positives = 39/64 (60%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AG++ LG GE +L + Q + L I FT + VL A A S L EGKQIHAL FKT +
Sbjct: 43 AGYARLGKGELSLVLYVQFLRTGLRISQFTFAGVLSACAGISGLVEGKQIHALVFKTGFE 102
Query: 181 TNLY 192
N++
Sbjct: 103 GNVF 106
>ref|XP_006836621.1| hypothetical protein AMTR_s00232p00000850 [Amborella trichopoda]
gi|548839164|gb|ERM99474.1| hypothetical protein
AMTR_s00232p00000850 [Amborella trichopoda]
Length = 230
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/64 (46%), Positives = 39/64 (60%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYI 180
AG++ LG GE +L + Q + L I FT + VL A A S L EGKQIHAL FKT +
Sbjct: 25 AGYARLGKGELSLVLYVQFLRTRLIISQFTFAGVLSACAGISGLVEGKQIHALVFKTGFE 84
Query: 181 TNLY 192
N++
Sbjct: 85 GNIF 88
>ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
Length = 977
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +1
Query: 4 GFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWYIT 183
G+S +G EEAL F Q DL ++ FT SSV++ NS+ LE GKQIH L KT Y +
Sbjct: 85 GYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDS 144
Query: 184 NLYQSGS 204
+ + S
Sbjct: 145 SSFVGSS 151
>ref|XP_003567523.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 577
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWY 177
+G S LG G EA F QMR+ D FT +S+LKA+ +SS+L EG Q+HAL KT Y
Sbjct: 299 SGLSCLGRGNEAFQHFVQMRRQGTDTDVFTFASMLKAIGSSSSLLEGSQVHALVSKTGY 357
>gb|EMT17047.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 465
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/59 (49%), Positives = 38/59 (64%)
Frame = +1
Query: 1 AGFSNLGVGEEALTCFSQMRQADLAIDFFTLSSVLKALANSSALEEGKQIHALAFKTWY 177
+G S LG G EA F +MR+ D FT S+LKA+ +SS+L EG+Q+HAL KT Y
Sbjct: 187 SGLSCLGRGNEAFQQFLEMRRHGADTDMFTFGSMLKAIGSSSSLLEGRQVHALILKTGY 245