BLASTX nr result
ID: Rehmannia25_contig00025101
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00025101
(1078 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 47 7e-09
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 47 7e-09
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 57 1e-08
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 57 3e-08
gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus pe... 54 5e-07
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A... 50 8e-07
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 44 2e-06
ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629... 45 2e-06
ref|XP_002449769.1| hypothetical protein SORBIDRAFT_05g022920 [S... 43 3e-06
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 42 3e-06
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 42 4e-06
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 42 4e-06
gb|EMJ16028.1| hypothetical protein PRUPE_ppa024018mg, partial [... 51 5e-06
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 58 6e-06
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 58 6e-06
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ... 58 6e-06
ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756... 46 6e-06
gb|EAZ37852.1| hypothetical protein OsJ_22198 [Oryza sativa Japo... 58 7e-06
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise... 45 7e-06
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 47.0 bits (110), Expect(2) = 7e-09
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPIL 360
F+W ILPT NL + + C C +ET+ H+ EC A+ +W LAP++
Sbjct: 1148 FMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLI 1204
Score = 40.8 bits (94), Expect(2) = 7e-09
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 5 EKDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVSSSDSYDS 133
E+D++ WHF KKGE+SVKS Y L L N NF + +S +S
Sbjct: 1091 EEDEVLWHFDKKGEYSVKSGYQLAL-----NQNFPNEPESSNS 1128
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 47.0 bits (110), Expect(2) = 7e-09
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPIL 360
F+W ILPT NL + + C C +ET+ H+ EC A+ +W LAP++
Sbjct: 461 FMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLI 517
Score = 40.8 bits (94), Expect(2) = 7e-09
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 5 EKDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVSSSDSYDS 133
E+D++ WHF KKGE+SVKS Y L L N NF + +S +S
Sbjct: 404 EEDEVLWHFDKKGEYSVKSGYQLAL-----NQNFPNEPESSNS 441
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 57.0 bits (136), Expect(3) = 1e-08
Identities = 24/57 (42%), Positives = 32/57 (56%)
Frame = +1
Query: 187 HFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPI 357
HF W+C G L TN L + I + CP CG E+I HL F C ++ +W L+PI
Sbjct: 937 HFEWQCLSGCLATNQRLFSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPI 993
Score = 25.8 bits (55), Expect(3) = 1e-08
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 5 EKDKLWWHFHKKGEFSVKSVYTLL--LKNKVCNLNFVSSSDS 124
+ D W F K G ++VKS Y L C+L F S S
Sbjct: 879 KSDDFSWSFTKSGNYTVKSGYWAARDLSRPTCDLPFQGPSVS 920
Score = 23.1 bits (48), Expect(3) = 1e-08
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 435 FGV*NEINHLFALV---VVKTRNLWVFQKERKTKRWIIDGAVAEWAEFRDISSK 587
F + +I +F + + K+RN ++F+ ++ + I+D A+ E ++ +SK
Sbjct: 1019 FDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQEANVWKQANSK 1072
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 57.0 bits (136), Expect(2) = 3e-08
Identities = 23/57 (40%), Positives = 33/57 (57%)
Frame = +1
Query: 187 HFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPI 357
HF+W+ G +P + NLR +GI D C CG E+I H F+C A+ +W L+ I
Sbjct: 839 HFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIWALSQI 895
Score = 28.5 bits (62), Expect(2) = 3e-08
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 8 KDKLWWHFHKKGEFSVKSVY 67
+D L WHF K G ++VKS Y
Sbjct: 784 EDTLGWHFTKAGNYTVKSGY 803
>gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus persica]
Length = 378
Score = 53.9 bits (128), Expect(2) = 5e-07
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAP 354
FIW C+ +L NLR + ++++ C +CG+ +T HLFF C A+L W +P
Sbjct: 224 FIWRCYRNVLAVRENLRRRRVDVEADCLLCGNNGKTEVHLFFRCEIARLFWFASP 278
Score = 27.7 bits (60), Expect(2) = 5e-07
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 23 WHFHKKGEFSVKSVYTLLLK 82
WHF K G ++VKS Y L +K
Sbjct: 165 WHFTKYGGYTVKSGYDLAIK 184
>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 494
Score = 49.7 bits (117), Expect(2) = 8e-07
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPILGRY 369
FIW +LPT NL + I + YC CG+ +E H C AK VW+L+P+ +
Sbjct: 223 FIWRAAKNLLPTAENLWKRKIVHEAYCKRCGNRVENTLHALITCKAAKKVWQLSPMASSF 282
Score = 31.2 bits (69), Expect(2) = 8e-07
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +2
Query: 8 KDKLWWHFHKKGEFSVKSVYTLLLKNK 88
+D++ WH+ K+G++++KS Y + LK K
Sbjct: 166 EDEVIWHYDKRGKYTMKSGYQVALKLK 192
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 43.9 bits (102), Expect(2) = 2e-06
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLA 351
F+W +LP+ NL + I + C +C GIE + H +C AK VW+L+
Sbjct: 824 FVWRAAKNLLPSAENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLS 877
Score = 35.8 bits (81), Expect(2) = 2e-06
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +2
Query: 8 KDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVSSSDSYDSQKNARN 151
+D+L WHF K G+++VKS Y LK + F + S +S KN N
Sbjct: 768 EDELIWHFGKSGQYTVKSGYQRALK-----IRFPAMPSSSESSKNEWN 810
>ref|XP_006470123.1| PREDICTED: uncharacterized protein LOC102629438 [Citrus sinensis]
Length = 715
Score = 45.1 bits (105), Expect(2) = 2e-06
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLA 351
F+W +LP++ NL + I + C +C GIE + H +C AK VW+L+
Sbjct: 435 FVWRAAKNLLPSDENLWKRKIVQEPTCQLCKMGIENVFHALVDCKAAKKVWRLS 488
Score = 34.3 bits (77), Expect(2) = 2e-06
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 8 KDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVSSSDSYDSQKNARN 151
+D+L WHF K G+++VKS Y L N+ F + S + KN N
Sbjct: 379 EDELIWHFGKSGQYTVKSGYQTAL-----NIRFPAMPSSSEFSKNEWN 421
>ref|XP_002449769.1| hypothetical protein SORBIDRAFT_05g022920 [Sorghum bicolor]
gi|241935612|gb|EES08757.1| hypothetical protein
SORBIDRAFT_05g022920 [Sorghum bicolor]
Length = 705
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 187 HFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKL 348
HF+W P NL+ + ++ID C VC E HLF +C K VW+L
Sbjct: 460 HFMWRFCHNSHPLRMNLKRRHVDIDTKCVVCNRFDEDGAHLFMKCKPMKRVWQL 513
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 5 EKDKLWWHFHKKGEFSVKSVYTLLLKNKV-CNLNFVSSSDSYDSQKNA 145
++++ WHF KKG F VKS Y + N + + + +SS D QKNA
Sbjct: 397 DRNRAAWHFDKKGIFLVKSAYKVYRANTILSSRSGGASSSGSDQQKNA 444
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKL 348
F+W +LPT+ NL + I +C C ETI H F+C ++ +WKL
Sbjct: 668 FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKL 720
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 11 DKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVSSSDS 124
D++ WH+ KKG +SVKS Y L L+ K N S D+
Sbjct: 613 DQVLWHYDKKGNYSVKSGYQLALQMKFPNRPSSSKEDN 650
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 42.4 bits (98), Expect(2) = 4e-06
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKL 348
F+W +LPT+ NL + I +C C ETI H F+C ++ +WKL
Sbjct: 465 FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKL 517
Score = 36.2 bits (82), Expect(2) = 4e-06
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 11 DKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVSSSDS 124
D++ WH+ KKG +SVKS Y L L+ K N S D+
Sbjct: 410 DQVLWHYDKKGNYSVKSGYQLALQMKFPNRPSSSKEDN 447
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 765
Score = 42.4 bits (98), Expect(2) = 4e-06
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKL 348
F+W +LPT+ NL + I +C C ETI H F+C ++ +WKL
Sbjct: 465 FMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKL 517
Score = 36.2 bits (82), Expect(2) = 4e-06
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 11 DKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVSSSDS 124
D++ WH+ KKG +SVKS Y L L+ K N S D+
Sbjct: 410 DQVLWHYDKKGNYSVKSGYQLALQMKFPNRPSSSKEDN 447
>gb|EMJ16028.1| hypothetical protein PRUPE_ppa024018mg, partial [Prunus persica]
Length = 213
Score = 51.2 bits (121), Expect(2) = 5e-06
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPI 357
F+W C IL NLR + I++++ CP G ET H+FF C AK W +P+
Sbjct: 153 FLWRCCRNILAVRGNLRSRRIDVENGCPFYGQEEETQVHIFFRCQIAKPFWFASPL 208
Score = 26.9 bits (58), Expect(2) = 5e-06
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 5 EKDKLWWHFHKKGEFSVKSVYTLLL 79
E D WHF K G ++VKS Y L +
Sbjct: 88 EHDGRVWHFTKHGLYTVKSGYDLAI 112
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 58.2 bits (139), Expect = 6e-06
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWK-------L 348
F W G++P L K I + CPVC G+E I+H+ F C RAKL+WK +
Sbjct: 875 FAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHMVFTCRRAKLIWKQLGIWSRI 934
Query: 349 APILG 363
PILG
Sbjct: 935 QPILG 939
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 58.2 bits (139), Expect = 6e-06
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +1
Query: 187 HFIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPILG 363
HFIW C G L T + LR + I D C C + ETI H+ F CS A++VW+ A G
Sbjct: 1399 HFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRSANFSG 1457
>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1185
Score = 58.2 bits (139), Expect = 6e-06
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWK-------L 348
F W G++P L K I + CPVC G+E I+H+ F C RAKL+WK +
Sbjct: 875 FAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHMVFTCRRAKLIWKQLGIWSRI 934
Query: 349 APILG 363
PILG
Sbjct: 935 QPILG 939
>ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756955 [Setaria italica]
Length = 1203
Score = 46.2 bits (108), Expect(2) = 6e-06
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWK 345
F W G++P + L + I CPVC +G E I+HL F C RA+ VW+
Sbjct: 924 FGWRALKGLVPCRAILANRHIGQLGGCPVCQNGAEDIKHLLFTCDRAREVWQ 975
Score = 31.6 bits (70), Expect(2) = 6e-06
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 2 GEKDKLWWHFHKKGEFSVKSVYTLLLKNK 88
G +D + WH+++ G FSV+S Y NK
Sbjct: 862 GREDVVAWHYNRSGRFSVRSAYHCQWDNK 890
>gb|EAZ37852.1| hypothetical protein OsJ_22198 [Oryza sativa Japonica Group]
Length = 446
Score = 57.8 bits (138), Expect = 7e-06
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWK-------L 348
F W G++P L K I + CPVC G+E I+H+ F C RAKL+WK +
Sbjct: 264 FAWRMLHGVIPCKGILADKHIAVQGGCPVCPSGVEDIKHMVFTCKRAKLIWKQLGIWSRI 323
Query: 349 APILG 363
PILG
Sbjct: 324 QPILG 328
>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
Length = 1503
Score = 45.1 bits (105), Expect(2) = 7e-06
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +1
Query: 190 FIWECFCGILPTNSNLRMKGINIDHYCPVCGDGIETIEHLFFECSRAKLVWKLAPI 357
F+W G LPTN L + I ID C +C + E+ H+ EC A VW L+ +
Sbjct: 1395 FMWRLAHGCLPTNETLWRRRIPIDKECSICLNRTESDRHILLECPPAIQVWALSDL 1450
Score = 32.3 bits (72), Expect(2) = 7e-06
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 8 KDKLWWHFHKKGEFSVKSVYTLLLKNKVCNLNFVSSSDSYDSQ 136
+DK+ WH+ K G ++V+S Y L V +L SS S DS+
Sbjct: 1337 EDKILWHYSKSGTYTVRSAYHL-----VRSLRVEVSSSSSDSR 1374