BLASTX nr result

ID: Rehmannia25_contig00025063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00025063
         (585 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006379504.1| hypothetical protein POPTR_0008s02960g [Popu...    59   1e-06

>ref|XP_006379504.1| hypothetical protein POPTR_0008s02960g [Populus trichocarpa]
           gi|550332298|gb|ERP57301.1| hypothetical protein
           POPTR_0008s02960g [Populus trichocarpa]
          Length = 113

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 42/94 (44%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
 Frame = -1

Query: 549 MSTDLELR--LPTI-----KTISSKSSDLSDDRISCLI--NEEEEDCRTPKSPRHMIPAI 397
           MSTDLE R  LP I     KT + +S   +DD+ + +   N E +DC+TPKS  H IPA+
Sbjct: 1   MSTDLESRQDLPRIQVRAVKTETLQSCSATDDKETIIKQENSETDDCQTPKSEEHKIPAV 60

Query: 396 LSCXXXXXXXXXXXXXATSCKRKLSCELRFFEMV 295
           LSC               SCKRKL+ EL FFE+V
Sbjct: 61  LSCPPAPRKPRRSF----SCKRKLT-ELEFFEIV 89


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