BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00025030
         (748 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    53   1e-13
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]    81   3e-13
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...    80   9e-13
emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]    76   1e-11
gb|ACN32036.1| unknown [Zea mays]                                      75   3e-11
gb|ACL54615.1| unknown [Zea mays]                                      75   3e-11
emb|CAN71996.1| hypothetical protein VITISV_023485 [Vitis vinifera]    47   6e-11
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    70   1e-09
gb|AAT47103.1| hypothetical protein [Oryza sativa Japonica Group]      67   6e-09
gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subc...    66   1e-08
gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subc...    65   2e-08
ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488...    65   3e-08
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...    65   3e-08
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    64   4e-08
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc...    64   4e-08
emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]    64   4e-08
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]    64   5e-08
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]    62   3e-07
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...    61   3e-07
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc...    61   3e-07

>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 52.8 bits (125), Expect(3) = 1e-13
 Identities = 34/117 (29%), Positives = 52/117 (44%)
 Frame = -2

Query: 660 GGFSRGGPYRGRGDKFNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXX 481
           G   R G  R +    + KP+CQ+C    HTA  C++R DI                   
Sbjct: 118 GXGGRNGQGRRQNSSPSEKPQCQLCGKFGHTAQICYHRFDI------SFQGGXTTTSPSL 171

Query: 480 XXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQL 310
               Q       AS S+   + ++ W+ +SGA++H+T +L NL   S Y G  +V +
Sbjct: 172 NNGNQNNILAMVASFSN--SSADESWYLDSGASHHLTQNLGNLTSTSPYTGTDRVTI 226



 Score = 39.7 bits (91), Expect(3) = 1e-13
 Identities = 16/37 (43%), Positives = 24/37 (64%)
 Frame = -2

Query: 123 LWHSRLGHVALDVVKRALRSCNIPFVSNRNVN*CSSC 13
           LWH+RLGHVA D+V + + +CN+     ++   CS C
Sbjct: 305 LWHNRLGHVASDIVSKVMNTCNVASGKYKSTV-CSDC 340



 Score = 30.4 bits (67), Expect(3) = 1e-13
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = -3

Query: 308 EMDQDLQTRMVLLKGKVKDGLYCFTLSSVNGDPPQLTSHPN--HQHIEHALVN 156
           ++ +D  T+MVL +GK+++GLY F + S N  P    ++ +  H H    + N
Sbjct: 250 QLKKDRHTKMVLAQGKLENGLYKFPVFS-NKKPYSSVNNASAFHSHFSSTIEN 301


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 53/154 (34%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
 Frame = -2

Query: 687 QFHGNEGDRGGF--SRGGPYRGRGDKFNN-KPRCQICHVPNHTAHKCWYRLDIXXXXXXX 517
           QF GN+  RG F  +RG   RGRG      KP+CQ+C+   HT H+C+YR D        
Sbjct: 153 QFGGNQXTRGSFVHNRG---RGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMP 209

Query: 516 XXXXXXXXXXXXXXXFQRGATVNA--------------------ASMSSVEDNQEDHWFP 397
                             G+  +A                    A +++ ED Q   WFP
Sbjct: 210 ANGPTPGVLGSGARNGASGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFP 269

Query: 396 NSGATNHVTYDLENLNIASEYAGPGKVQLRDGSG 295
           +SGATNHVT+DL NLN  +EY G  K+ + +G+G
Sbjct: 270 DSGATNHVTHDLGNLNSGAEYNGNSKIHMGNGTG 303


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 50/138 (36%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
 Frame = -2

Query: 675 NEGDRGGFSRGGPYRGRGD----KFNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXX 508
           N G  GGF RGG   GRGD      NN+P CQ+C    HT HKCW R D           
Sbjct: 167 NRGGHGGFGRGG---GRGDDGSFNNNNRPTCQLCGKIGHTVHKCWKRFDASFTGE----- 218

Query: 507 XXXXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAG 328
                         + A V AAS   V+ N    W+ +SGAT+H+T +L+ L +  +YAG
Sbjct: 219 -------------DKSANV-AASSYEVDTN----WYIDSGATDHITSELDKLTVKDKYAG 260

Query: 327 PGKVQLRDGSGPSNKNGA 274
             +V    GSG +   G+
Sbjct: 261 NDQVHTASGSGVAQIGGS 278


>emb|CAN66999.1| hypothetical protein VITISV_019171 [Vitis vinifera]
          Length = 955

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 53/154 (34%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
 Frame = -2

Query: 687 QFHGNEGDRGGF--SRGGPYRGRGDKFNN-KPRCQICHVPNHTAHKCWYRLDIXXXXXXX 517
           QF GN+  RG F  +RG   RGRG      KP+CQ+C+   HT H+C+YR D        
Sbjct: 155 QFGGNQVTRGSFVHNRG---RGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMX 211

Query: 516 XXXXXXXXXXXXXXXFQRGATVNAASMSSVE-DNQEDH-------------------WFP 397
                             G+  +A +++  E D QED                    WFP
Sbjct: 212 ANGPTPGVLGSGARNGAXGSISSAGNVNLTEYDAQEDQDYSEMEAMVATXEDLQNCCWFP 271

Query: 396 NSGATNHVTYDLENLNIASEYAGPGKVQLRDGSG 295
           +S ATNHVT+DL NLN  +EY G  K+ + + +G
Sbjct: 272 DSRATNHVTHDLGNLNSGAEYNGNSKIHMGNETG 305


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
 Frame = -2

Query: 672 EGDRGGFSRGGPYRGRGDKFNNKP-------------RCQICHVPNHTAHKCWYRLDIXX 532
           +  RGG  RGG  R +  + NN+P              CQIC   NH A +CW+R D   
Sbjct: 249 QNGRGGRGRGG--RSQPGRGNNRPPARPPSNNSSSSGTCQICGKGNHNALQCWHRFD--- 303

Query: 531 XXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENL 352
                               +Q  +TV  A+ ++ E   + +W+ +SGAT+H+T DLE L
Sbjct: 304 ------------------QAYQAESTVKQAAAATHEYAVDPNWYMDSGATDHITSDLERL 345

Query: 351 NIASEYAGPGKVQLRDGSGPSNKNGAPQRE 262
                Y G  K+Q+ +G+G S++  + QR+
Sbjct: 346 TTRERYTGGDKIQVANGAGSSHEASSSQRQ 375


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
 Frame = -2

Query: 672 EGDRGGFSRGGPYRGRGDKFNNKP-------------RCQICHVPNHTAHKCWYRLDIXX 532
           +  RGG  RGG  R +  + NN+P              CQIC   NH A +CW+R D   
Sbjct: 249 QNGRGGRGRGG--RSQPGRGNNRPPARPPSNNSSSSGTCQICGKGNHNALQCWHRFD--- 303

Query: 531 XXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENL 352
                               +Q  +TV  A+ ++ E   + +W+ +SGAT+H+T DLE L
Sbjct: 304 ------------------QAYQAESTVKQAAAATHEYAVDPNWYMDSGATDHITSDLERL 345

Query: 351 NIASEYAGPGKVQLRDGSGPSNKNGAPQRE 262
                Y G  K+Q+ +G+G S++  + QR+
Sbjct: 346 TTRERYTGGDKIQVANGAGSSHEASSSQRQ 375


>emb|CAN71996.1| hypothetical protein VITISV_023485 [Vitis vinifera]
          Length = 1087

 Score = 47.4 bits (111), Expect(3) = 6e-11
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 17/133 (12%)
 Frame = -2

Query: 657 GFSRGGPYRGRGDKFNN----KPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXX 490
           G  RGG   G+G + N+    KP+CQ+C    HTA  C++  DI                
Sbjct: 116 GHGRGGR-NGQGGRQNSNPSEKPQCQLCGKFGHTAQICYHXFDISF-------------- 160

Query: 489 XXXXXXFQRGATVNAASMSSVEDNQ-------------EDHWFPNSGATNHVTYDLENLN 349
                  Q G T+ + S+++   N              ++ W+ + GA++H+T +L N  
Sbjct: 161 -------QGGQTITSPSLNNGNQNNIXAMVASSSNSPADESWYLDFGASHHLTQNLGNXT 213

Query: 348 IASEYAGPGKVQL 310
             S Y G  +V +
Sbjct: 214 STSPYTGTDRVTI 226



 Score = 37.4 bits (85), Expect(3) = 6e-11
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -2

Query: 123 LWHSRLGHVALDVVKRALRSCNI 55
           LWH+RLGH A D+V + + +CN+
Sbjct: 296 LWHNRLGHAASDIVSKVMNTCNV 318



 Score = 28.5 bits (62), Expect(3) = 6e-11
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -3

Query: 299 QDLQTRMVLLKGKVKDGLYCFTLSS 225
           +D  T+MVL +GK+++GLY F + S
Sbjct: 244 KDRHTKMVLAQGKLENGLYKFPMFS 268


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
 Frame = -2

Query: 684 FHGNEG---DRGGFSRGGPYRGRGDKF-------------NNKPRCQICHVPNHTAHKCW 553
           F+G  G   +  G S  G +RGRG+K              N KP CQ+C    H   +C+
Sbjct: 265 FYGGRGFNWNYNGRSNRGGFRGRGNKGSFQARPPWNSDNQNEKPACQLCGKIGHVVAQCY 324

Query: 552 YRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHV 373
           YR D                        Q    +  + + S     +D+W+P+SGA+NHV
Sbjct: 325 YRFDHTFQVPQNLSSRNSSPRAYYSFSPQVNGVIPTSEVFS-----DDNWYPDSGASNHV 379

Query: 372 TYDLENLNIASEYAGPGKVQLRDGSGPSNKN 280
           T + ENL  ++E+AG  +V + +G+G S K+
Sbjct: 380 TPNPENLMKSAEFAGQNQVHVGNGTGLSIKH 410


>gb|AAT47103.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 307

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 42/139 (30%), Positives = 62/139 (44%)
 Frame = -2

Query: 678 GNEGDRGGFSRGGPYRGRGDKFNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXX 499
           G  G  G   RGG  RGRGD    +P CQ+C    HT  KCW   D              
Sbjct: 191 GGRGQGGNPGRGGFGRGRGDG-KPRPTCQLCGKIGHTVIKCWKCFD-------------- 235

Query: 498 XXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGK 319
                     ++ A V A+S  SV+ N    W+ +S AT+H+T ++E L +  +Y    +
Sbjct: 236 ----HSFTGEEKNANVAASSSYSVDTN----WYVDSSATDHITGEMEKLAVKDKYTSNEQ 287

Query: 318 VQLRDGSGPSNKNGAPQRE 262
           V    G+G  +++ A  R+
Sbjct: 288 VHTASGTGSGHEDAASSRQ 306


>gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 339

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 41/133 (30%), Positives = 61/133 (45%)
 Frame = -2

Query: 660 GGFSRGGPYRGRGDKFNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXX 481
           GG  RG   RG G +   +P CQ+C    HT  KCWYR D                    
Sbjct: 229 GGCGRGNGGRGGGQQ-GPRPVCQLCGKTGHTVIKCWYRFD-------------------- 267

Query: 480 XXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDG 301
              +Q    V AA+ +S     + +W+ + GAT+H+T +L+ L+I  +Y G  +V   +G
Sbjct: 268 -QTYQPEEKVAAAATNSAY-GVDTNWYVDCGATDHITGELDKLSIREKYNGLDQVHATNG 325

Query: 300 SGPSNKNGAPQRE 262
           SG  N+     R+
Sbjct: 326 SGSGNEEATTSRQ 338


>gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 358

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 42/128 (32%), Positives = 57/128 (44%)
 Frame = -2

Query: 678 GNEGDRGGFSRGGPYRGRGDKFNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXX 499
           GN G RGGF RGG  RG G     KP CQ+C    HT  KCW R D              
Sbjct: 200 GNRG-RGGFGRGGGGRGDGKL---KPICQLCGKIGHTVVKCWKRFD-------------- 241

Query: 498 XXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGK 319
                     +  +   A +   V+ N    W+ ++GAT+H+T +LE L +  +Y G  +
Sbjct: 242 -----TSYSGEEKSVAAATNSYGVDTN----WYIDTGATDHITGELEKLTVRDKYTGGDQ 292

Query: 318 VQLRDGSG 295
           V    G+G
Sbjct: 293 VHTASGTG 300


>ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488260 [Cicer arietinum]
          Length = 752

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 3/227 (1%)
 Frame = -2

Query: 684 FHGNEGDRGGFSRGGPYRGRGDKFNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXX 505
           F  N+    G  RG  +RG   +  +KP CQ+C+   HT  +C+YR D            
Sbjct: 280 FRSNKSGTRGNWRGSNFRGGRGRGRSKPTCQVCNKIGHTTVQCFYRFD------------ 327

Query: 504 XXXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGP 325
                             ++A ++S    Q+  W+ +SGA NHVT+  E L   SE  G 
Sbjct: 328 -KSYTCSNHYAENNKQENHSAFIASPYHGQDYEWYFDSGANNHVTHQNEKLQDLSESNGN 386

Query: 324 G--KVQLRDGSGP-SNKNGAPQRES*GWAILLHFV*RQW*STSAHVSPKPSTH*TCIS*F 154
              K +++DG    S+ N    ++S                   ++S K +         
Sbjct: 387 ALLKGKVKDGLYQLSSANSQVNKDS-----------------CIYMSVKEN--------- 420

Query: 153 YVFPK*I*SGLWHSRLGHVALDVVKRALRSCNIPFVSNRNVN*CSSC 13
                      WH +LGH    V+++ L++CN+   SN +   C +C
Sbjct: 421 -----------WHRKLGHPNNKVLEKVLKNCNVKTSSNDHFLLCEAC 456


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
           gi|31430072|gb|AAP52036.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1058

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 44/138 (31%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
 Frame = -2

Query: 678 GNEGDRGGFSRGGPY-RGRGDKFNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXX 502
           G  G  G  +RGG   RGRGD    KP CQ+C    HT  KCW R D             
Sbjct: 195 GGHGQGGNNNRGGGSGRGRGDG-KPKPTCQLCGKVGHTVAKCWKRFD------------- 240

Query: 501 XXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPG 322
                      ++ A   A S S   D    +W+ +S AT+H+T ++E L++  +Y G  
Sbjct: 241 -----PSFTREEKSANTAATSSSYGIDT---NWYVDSNATDHITGEMEKLSVKDKYHGSE 292

Query: 321 KVQLRDGSGPSNKNGAPQ 268
           +V    G+G  + N A Q
Sbjct: 293 QVHNAGGTGHEDANPARQ 310


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
 Frame = -2

Query: 678 GNEGDRGGFS---RGGPYRGRGDK-FNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXX 511
           G    RGGF    RG  Y G  D   +++PRCQ+C    HTA  CWYR D          
Sbjct: 251 GRGPSRGGFQSFGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWYRFD---------- 300

Query: 510 XXXXXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEYA 331
                         QR     +A+ ++ ++     W+ ++GAT+H+T DL+ L +  +Y 
Sbjct: 301 --------ENYVPDQR-----SANSAAHQNGSNVPWYTDTGATDHITGDLDRLTMHDKYT 347

Query: 330 GPGKVQLRDGSGPSNKN 280
           G  ++   +G+G +  N
Sbjct: 348 GTDQIIAANGTGMTISN 364


>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 807

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
 Frame = -2

Query: 678 GNEGDRGGFSRGGPY-----RGRGDKFNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXX 514
           GN G  GG SRG  Y     RG   + + +P CQ+C+   H A KCW+R D         
Sbjct: 218 GNGG--GGNSRGRGYTPARNRGNQQRVDPRPICQVCYKRGHVAAKCWHRFD--------- 266

Query: 513 XXXXXXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEY 334
                          +R     A +  +V+ N    W+ +SGAT+H+T +L+ L +  +Y
Sbjct: 267 ---------ENYVPDERHVAAAAQAAYAVDTN----WYIDSGATDHITSELDKLTVREKY 313

Query: 333 AGPGKVQLRDGSGPSNKN 280
            G  K+   +G G   K+
Sbjct: 314 KGTEKIHTANGVGMQIKH 331


>emb|CAN68496.1| hypothetical protein VITISV_010947 [Vitis vinifera]
          Length = 1539

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 50/188 (26%), Positives = 80/188 (42%)
 Frame = -2

Query: 606  KPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSV 427
            +P+CQ+C    HT  KC++R DI                       Q  + + A  M + 
Sbjct: 551  RPQCQLCGKFGHTVVKCYHRFDI------------TYQGTNGVSSSQDSSPLQA--MLAA 596

Query: 426  EDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGSGPSNKNGAPQRES*GWA 247
              N +D WF ++GAT+H+++  + L+    Y+G  +V + DG      N           
Sbjct: 597  TPNHQDSWFFDTGATHHLSHSAQTLSHVQPYSGADQVTIGDGHSLPILNTD--------Q 648

Query: 246  ILLHFV*RQW*STSAHVSPKPSTH*TCIS*FYVFPK*I*SGLWHSRLGHVALDVVKRALR 67
            +    + + W     +  P  S+    +S   V P      +WHSRLGH    ++ +AL 
Sbjct: 649  VTKQTLLKGWLRDGLYEFPSSSSTHAFVSTSSV-PALTPGAIWHSRLGHPXXPILSKALA 707

Query: 66   SCNIPFVS 43
            SCN P VS
Sbjct: 708  SCN-PSVS 714


>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
          Length = 1442

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 61/242 (25%), Positives = 91/242 (37%), Gaps = 15/242 (6%)
 Frame = -2

Query: 693 SPQFHGNEGDRGGFSRGGPYRGRGDKFNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXX 514
           S Q     G+R G    G  R   ++   +P+CQ C    HTA  C              
Sbjct: 368 SGQAPARSGNRDGRRPNGSNRPSNNQRPYRPKCQFCDELGHTAKNC-------------- 413

Query: 513 XXXXXXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEY 334
                              T N+A+ S+++   E  W  +S A++++T DL+NL+I SEY
Sbjct: 414 -----------PQLKPSEITANSATTSTMK---EQKWLLDSAASHNITGDLQNLSIHSEY 459

Query: 333 AGPGKVQLRDGSGPSNKNGAPQRES*GWAILLHFV*RQW*STSAHVSPKPSTH*TCIS*F 154
            G  +V L DGSG      A   E    AILL                      +C +  
Sbjct: 460 DGTDEVVLGDGSGL-----AVSHEPITGAILLRG--------------------SCENGI 494

Query: 153 YVFPK*I*SGL---------------WHSRLGHVALDVVKRALRSCNIPFVSNRNVN*CS 19
           Y+F + +                   WH RLGH +  +VK  +   ++P  +N+    C 
Sbjct: 495 YIFSESLVGNFSQKVANVHERMLLDGWHKRLGHPSYPIVKNLVSIFSLPTTTNKITMLCR 554

Query: 18  SC 13
           SC
Sbjct: 555 SC 556


>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
          Length = 1144

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 55/198 (27%), Positives = 82/198 (41%)
 Frame = -2

Query: 606 KPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXXXXXXXXXXXXFQRGATVNAASMSSV 427
           +P+CQ C    HTA  C                                 TVN A  S  
Sbjct: 293 QPKCQYCDQMGHTAKAC-------------------------PQLNSSEMTVNCAGTS-- 325

Query: 426 EDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPGKVQLRDGSGPSNKNGAPQRES*GWA 247
            D Q + W  +S A++++T D++NL+I SEY G  +V L DG+G + ++          A
Sbjct: 326 -DGQANKWLIDSAASHNITGDIKNLSIHSEYDGTDEVLLGDGTGLAARSTG--------A 376

Query: 246 ILLHFV*RQW*STSAHVSPKPSTH*TCIS*FYVFPK*I*SGLWHSRLGHVALDVVKRALR 67
           ILL            +    PST        YV  +   +G WH RLGH ++ VV+  + 
Sbjct: 377 ILLRGACENGVYIFPNSMMAPSTPKMVA---YVHERTSING-WHKRLGHPSIKVVQNLVN 432

Query: 66  SCNIPFVSNRNVN*CSSC 13
             ++P  +N+    C SC
Sbjct: 433 LFSLPLTTNKLPLSCPSC 450


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1145

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
 Frame = -2

Query: 678 GNEGDRG-GFSRGGPYRGRGDKFNNKPRCQICHVPNHTAHKCWYRLDIXXXXXXXXXXXX 502
           GN G RG G + GGP R        KP CQ+C    HTA  CWYR D             
Sbjct: 257 GNGGGRGRGRAPGGPDR--------KPTCQVCFKRGHTATDCWYRYD------------- 295

Query: 501 XXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASEYAGPG 322
                      +  A   A+S   V+ N    W+ ++GAT+H+T +LE L    +Y G  
Sbjct: 296 ----EDYVPDDKHVAAATASSSYGVDTN----WYIDTGATDHITGELEKLTTKDKYNGNE 347

Query: 321 KVQLRDGSGPSNKN 280
           ++    G+  S+++
Sbjct: 348 QIHTASGADSSDES 361


>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1241

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
 Frame = -2

Query: 678 GNEGDRGGFSRGGPYRGRGDKFN------NKPRCQICHVPNHTAHKCWYRLDIXXXXXXX 517
           G  G RG  +   P RGRG   N      ++P CQ+C    H A +CW+R D        
Sbjct: 237 GGRGTRGRSNPAAPGRGRGTGGNQTRGGNDRPICQVCLKRGHVAAECWHRYD-------- 288

Query: 516 XXXXXXXXXXXXXXXFQRGATVNAASMSSVEDNQEDHWFPNSGATNHVTYDLENLNIASE 337
                           +R A   AA+   ++ N    W+ ++GAT+H+T +L+ L++  +
Sbjct: 289 ----------ETYVPDERSAA--AAAAYGIDTN----WYLDTGATDHITNELDKLDVREK 332

Query: 336 YAGPGKVQLRDGSGPSNKN 280
           Y G  K+    G+G   K+
Sbjct: 333 YKGGDKIHTASGAGMEIKH 351