BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00024881
         (466 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS73317.1| hypothetical protein M569_01433 [Genlisea aurea]       144   2e-35
ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containi...   120   5e-27
ref|XP_004242310.1| PREDICTED: pentatricopeptide repeat-containi...   125   8e-27
ref|XP_006352817.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_006468369.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-26
gb|EXB59779.1| hypothetical protein L484_010890 [Morus notabilis]     115   5e-26
gb|EMJ15619.1| hypothetical protein PRUPE_ppa026010mg, partial [...   109   6e-25
gb|EOY09977.1| Pentatricopeptide repeat superfamily protein, put...   117   2e-24
ref|XP_006448819.1| hypothetical protein CICLE_v10018334mg [Citr...   110   6e-24
ref|XP_002533770.1| pentatricopeptide repeat-containing protein,...   108   1e-23
ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
gb|EXB40433.1| hypothetical protein L484_013736 [Morus notabilis]     112   5e-23
ref|XP_006384866.1| hypothetical protein POPTR_0004s21780g [Popu...   112   7e-23
ref|XP_002514406.1| pentatricopeptide repeat-containing protein,...   110   1e-22
ref|XP_004295443.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-22
ref|XP_002875235.1| pentatricopeptide repeat-containing protein ...   109   4e-22
ref|XP_006290740.1| hypothetical protein CARUB_v10016836mg [Caps...   108   7e-22
ref|XP_004253182.1| PREDICTED: pentatricopeptide repeat-containi...   108   7e-22
ref|XP_002328140.1| predicted protein [Populus trichocarpa]           108   1e-21
ref|XP_006342434.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21

>gb|EPS73317.1| hypothetical protein M569_01433 [Genlisea aurea]
          Length = 748

 Score =  144 bits (364), Expect(2) = 2e-35
 Identities = 74/128 (57%), Positives = 86/128 (67%)
 Frame = +2

Query: 65  QGGKLVQAHLHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCY 244
           + GKL+QAH+ RTD  SNTFLVNRLI L+SKC  TA AR LFDQMP+R+ FSYHA LD Y
Sbjct: 27  RAGKLIQAHILRTDLSSNTFLVNRLIELHSKCSCTAYARRLFDQMPVRNIFSYHAALDSY 86

Query: 245 CKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYS 424
           C+ ND   AY+VFD+MPERN VSW  +I   S   H  +A+E    M   G  P   T S
Sbjct: 87  CRSNDVREAYRVFDRMPERNAVSWNLLIGMLSRIGHKDEAVESYYTMRSYGFIPTHVTLS 146

Query: 425 SVLRACEG 448
           SVL AC G
Sbjct: 147 SVLSACGG 154



 Score = 30.4 bits (67), Expect(2) = 2e-35
 Identities = 15/27 (55%), Positives = 21/27 (77%), Gaps = 3/27 (11%)
 Frame = +3

Query: 3  QTKNAS---SLANVLQICINHKAHKAG 74
          Q K++S   +LAN+LQICI+  AH+AG
Sbjct: 3  QAKSSSPPPNLANLLQICIDQGAHRAG 29


>ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  120 bits (301), Expect(2) = 5e-27
 Identities = 58/131 (44%), Positives = 86/131 (65%)
 Frame = +2

Query: 71  GKLVQAHLHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCK 250
           GKL+ AH+ R+    +TFL NRLI  Y+KC    A+R LFDQMP RD ++++AIL  YCK
Sbjct: 24  GKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCK 83

Query: 251 LNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSV 430
            ++  +A+ +F +MPERN+VSW T+I+A + +    KAL +   M R+G  P  +T +SV
Sbjct: 84  ASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASV 143

Query: 431 LRACEGFFNIK 463
           L AC    +++
Sbjct: 144 LSACGALVDVE 154



 Score = 26.2 bits (56), Expect(2) = 5e-27
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +3

Query: 24 LANVLQICINHKAHKAG 74
          LA++LQ CI+ KAH AG
Sbjct: 8  LASLLQTCIDKKAHLAG 24



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/73 (39%), Positives = 41/73 (56%)
 Frame = +2

Query: 224 HAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVR 403
           +++LD Y K  +  +A  +F  MPE +VVSW  MIA Y     + KA+E L  M   G  
Sbjct: 291 NSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFE 350

Query: 404 PNMYTYSSVLRAC 442
           P+  TY ++L AC
Sbjct: 351 PDEITYVNMLVAC 363


>ref|XP_004242310.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Solanum lycopersicum]
          Length = 765

 Score =  125 bits (313), Expect = 8e-27
 Identities = 60/131 (45%), Positives = 84/131 (64%)
 Frame = +2

Query: 71  GKLVQAHLHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCK 250
           GKL+ AH+ R    ++TFL+NRLI LYSK G    ARHLFDQM   + +S+H++L  YCK
Sbjct: 26  GKLLHAHILRIGLSADTFLLNRLIELYSKSGHIHTARHLFDQMLEPNVYSWHSLLTAYCK 85

Query: 251 LNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSV 430
                NA+++F  MPERN VSW T+I+A++ + H  KAL++   M   G  P   T++SV
Sbjct: 86  QGQLDNAHELFSNMPERNTVSWNTLISAFARNHHETKALKVYSQMNAHGFSPTHITFASV 145

Query: 431 LRACEGFFNIK 463
           L AC G   ++
Sbjct: 146 LSACGGLAELE 156


>ref|XP_006352817.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Solanum tuberosum]
          Length = 765

 Score =  124 bits (312), Expect = 1e-26
 Identities = 61/131 (46%), Positives = 84/131 (64%)
 Frame = +2

Query: 71  GKLVQAHLHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCK 250
           GKL+ AH+ R    ++TFL+NRLI LYSK G    ARHLFDQM   + +S+H++L  YCK
Sbjct: 26  GKLLHAHILRIGLSADTFLLNRLIELYSKSGHIHTARHLFDQMLQPNIYSWHSLLTAYCK 85

Query: 251 LNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSV 430
                NA+++F  MPERN VSW T+I+A++ + H  KALE+   M   G  P   T++SV
Sbjct: 86  QGQLDNAHELFSIMPERNSVSWNTLISAFARNRHETKALEVYSQMNAHGFSPTHITFASV 145

Query: 431 LRACEGFFNIK 463
           L AC G   ++
Sbjct: 146 LSACGGLAELE 156


>ref|XP_006468369.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Citrus sinensis]
          Length = 768

 Score =  119 bits (297), Expect(2) = 2e-26
 Identities = 59/131 (45%), Positives = 84/131 (64%)
 Frame = +2

Query: 71  GKLVQAHLHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCK 250
           GKL+ AH+ R     +TFL NRLI LYSKC +T +A+HLFD+MP +D +S++AIL   CK
Sbjct: 27  GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 86

Query: 251 LNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSV 430
            +D   AY++FD+MPERNVVSW  +I+A   +    KAL +   M  +G  P   T +SV
Sbjct: 87  SDDLEFAYKLFDEMPERNVVSWNNLISALVRNGLEEKALSVYNKMSNEGFVPTHITLASV 146

Query: 431 LRACEGFFNIK 463
            +A     +++
Sbjct: 147 FKASTALLDVE 157



 Score = 25.8 bits (55), Expect(2) = 2e-26
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 24 LANVLQICINHKAHKAG 74
          L N+LQ CI+ KAH AG
Sbjct: 11 LINLLQSCIDKKAHVAG 27



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/80 (38%), Positives = 45/80 (56%)
 Frame = +2

Query: 224 HAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVR 403
           +++LD Y K  D  +A  +F  +PER+VVSW  MIA Y     + KA+E+L  M   G  
Sbjct: 296 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQSTKAIELLQRMKSCGFE 355

Query: 404 PNMYTYSSVLRACEGFFNIK 463
           P+  T  ++L AC    +IK
Sbjct: 356 PDEVTSINMLVACVRSGDIK 375



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/80 (33%), Positives = 45/80 (56%)
 Frame = +2

Query: 203 LRDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIM 382
           + D F   A+++ YCK  D   A Q FD M  +N V+W  MI  Y+ + +  +A+ +   
Sbjct: 557 VNDIFVGSALIEMYCKCGDIYGARQFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 616

Query: 383 MLRDGVRPNMYTYSSVLRAC 442
           M+  GV+P+  T+ ++L AC
Sbjct: 617 MIASGVKPDDITFVAILTAC 636


>gb|EXB59779.1| hypothetical protein L484_010890 [Morus notabilis]
          Length = 775

 Score =  115 bits (287), Expect(2) = 5e-26
 Identities = 53/132 (40%), Positives = 85/132 (64%)
 Frame = +2

Query: 71  GKLVQAHLHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCK 250
           GKL+ A++ R   + NTFL NRLI LYSKC + A A H FD++P +D FS++AIL  +CK
Sbjct: 24  GKLIHAYIFRNGLIFNTFLSNRLIELYSKCSNIAYAHHTFDKIPKKDVFSWNAILGAHCK 83

Query: 251 LNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSV 430
             +  +A+++F +MP+RN+VSW  +I+A   +     AL++   M+ +G  P  +T +SV
Sbjct: 84  AGNLQDAHELFVKMPDRNIVSWNNVISALVRNGLERNALDVYDSMILEGFMPTRFTLASV 143

Query: 431 LRACEGFFNIKQ 466
             AC    ++++
Sbjct: 144 FSACGALLDVER 155



 Score = 28.1 bits (61), Expect(2) = 5e-26
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 15 ASSLANVLQICINHKAHKAG 74
          ++ LAN LQ CI+ KAH AG
Sbjct: 5  SARLANFLQFCIDKKAHLAG 24



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/73 (39%), Positives = 41/73 (56%)
 Frame = +2

Query: 224 HAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVR 403
           +++LD Y K  D +   +VF  +P  NVVSW  MIA Y  +    KALE +  M + G  
Sbjct: 291 NSLLDMYAKNGDINATEKVFANLPLANVVSWNVMIAGYGQTYQTRKALECVQRMCQLGFE 350

Query: 404 PNMYTYSSVLRAC 442
           P+  TY ++L AC
Sbjct: 351 PDEVTYINMLAAC 363


>gb|EMJ15619.1| hypothetical protein PRUPE_ppa026010mg, partial [Prunus persica]
          Length = 679

 Score =  109 bits (272), Expect(2) = 6e-25
 Identities = 56/132 (42%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
 Frame = +2

Query: 71  GKLVQAHLHRTDQL-SNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYC 247
           GKL+ A + R++ L SNTFL NRL+ LYSKCG+   A  +FD+MP RD +S++AIL  YC
Sbjct: 24  GKLIHAFILRSNGLLSNTFLSNRLVELYSKCGNIGYADRVFDKMPHRDVYSWNAILGGYC 83

Query: 248 KLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSS 427
           K     +A ++F ++PERN VSW T+I+A         AL +   M+ +G  P  +T +S
Sbjct: 84  KFGSLGDAQELFLKLPERNTVSWNTLISALVRHGQEETALGVYDTMILEGFMPTRFTLAS 143

Query: 428 VLRACEGFFNIK 463
           V  AC    +++
Sbjct: 144 VFSACGALLDVE 155



 Score = 30.4 bits (67), Expect(2) = 6e-25
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +3

Query: 15 ASSLANVLQICINHKAHKAG 74
          A+SLAN+LQ CI+ KAH AG
Sbjct: 5  ATSLANLLQGCIDKKAHLAG 24



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
 Frame = +2

Query: 98  RTDQLSNT-FLVNRLIALYSKCGDTAAARHLFDQMP----LRDTFSYHAILDCYCKLNDS 262
           R D++  T F    +++  +K   +   + +  QM     + D F   A++D YCK  D 
Sbjct: 420 RHDEMRPTQFTYATVLSCCAKLSSSFQGKQVHVQMTKDGYMSDLFVGSALIDMYCKCGDV 479

Query: 263 SNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSVLRAC 442
             A + FD MP +N V+W  MI  Y+ +    +A+ +   M+    +P+  T+ +VL AC
Sbjct: 480 DEARKFFDMMPSKNTVTWNEMIHGYAQNGRGDEAVLLYRDMIGSSQKPDCITFVAVLTAC 539


>gb|EOY09977.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao] gi|508718081|gb|EOY09978.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508718082|gb|EOY09979.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao] gi|508718083|gb|EOY09980.1|
           Pentatricopeptide repeat superfamily protein, putative
           isoform 1 [Theobroma cacao]
          Length = 777

 Score =  117 bits (293), Expect = 2e-24
 Identities = 55/124 (44%), Positives = 84/124 (67%)
 Frame = +2

Query: 71  GKLVQAHLHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCK 250
           GK++ A++ R++ L+NTFL NRLI LYSKC D  +A H+FDQ P ++ +S++A+L   CK
Sbjct: 24  GKVLHAYIFRSNLLANTFLCNRLIELYSKCNDPTSAHHMFDQTPQKNIYSWNAVLSALCK 83

Query: 251 LNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSV 430
             + + A +VF+QMPERNV SW  +I+    +    KAL++  +M+ +G  P   T++SV
Sbjct: 84  AGNLTFARKVFEQMPERNVASWNNLISLMVKNGFQEKALDVYKLMVFEGFLPTHVTFASV 143

Query: 431 LRAC 442
           L AC
Sbjct: 144 LSAC 147



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
 Frame = +2

Query: 110 LSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYH-----AILDCYCKLNDSSNAY 274
           L   F    +++  +K   +   R +  Q+ ++D F  +     A++D YCK  D   A 
Sbjct: 519 LPTEFSYTAILSCCAKLSSSFQGRQVHSQI-VKDGFMNYVFVGTALVDMYCKCGDIDGAR 577

Query: 275 QVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSVLRAC 442
           + FD+MP RN V+W  MI  Y+ +    +A+ +   M+  G +P+  T+ +VL AC
Sbjct: 578 KYFDKMPVRNTVTWNEMIHGYAQNGRGDEAVHLYKNMIASGEKPDGITFIAVLTAC 633


>ref|XP_006448819.1| hypothetical protein CICLE_v10018334mg [Citrus clementina]
           gi|557551430|gb|ESR62059.1| hypothetical protein
           CICLE_v10018334mg [Citrus clementina]
          Length = 735

 Score =  110 bits (275), Expect(2) = 6e-24
 Identities = 56/126 (44%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
 Frame = +2

Query: 71  GKLVQAHLHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCK 250
           GKL+ AH+ R     +TFL NRLI LYSKC +T +A+HLFD+MP +D +S++AIL   CK
Sbjct: 27  GKLLHAHILRNGLFDDTFLCNRLIELYSKCNNTHSAQHLFDKMPHKDIYSWNAILSAQCK 86

Query: 251 LNDSSNAYQVFDQMPERNVVSWTTMIAAYSNS-----EHNCKALEMLIMMLRDGVRPNMY 415
            +D   AY++FD+MPERNVVSW  +I+A +++     EH  +   ++I +   G+  N+Y
Sbjct: 87  SDDLEFAYKLFDEMPERNVVSWNNLISALASTALLDVEHGRRCHGLVIKI---GLDKNIY 143

Query: 416 TYSSVL 433
             +++L
Sbjct: 144 VANALL 149



 Score = 25.8 bits (55), Expect(2) = 6e-24
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 24 LANVLQICINHKAHKAG 74
          L N+LQ CI+ KAH AG
Sbjct: 11 LINLLQSCIDKKAHVAG 27



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/80 (40%), Positives = 45/80 (56%)
 Frame = +2

Query: 224 HAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVR 403
           +++LD Y K  D  +A  +F  +PER+VVSW  MIA Y     N KA+E+L  M   G  
Sbjct: 263 NSLLDMYAKNGDMDSAEVIFSNLPERSVVSWNVMIAGYGQKYQNTKAIELLQRMKSCGFE 322

Query: 404 PNMYTYSSVLRACEGFFNIK 463
           P+  T  ++L AC    +IK
Sbjct: 323 PDEVTSINMLVACVRSGDIK 342



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/80 (32%), Positives = 45/80 (56%)
 Frame = +2

Query: 203 LRDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIM 382
           + D F   A+++ YCK  D   A + FD M  +N V+W  MI  Y+ + +  +A+ +   
Sbjct: 524 VNDIFVGSALIEMYCKCGDIYGARRFFDMMHGKNTVTWNEMIHGYAQNGYGDEAVRLYKD 583

Query: 383 MLRDGVRPNMYTYSSVLRAC 442
           M+  GV+P+  T+ ++L AC
Sbjct: 584 MIASGVKPDDITFVAILTAC 603


>ref|XP_002533770.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526307|gb|EEF28615.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 617

 Score =  108 bits (269), Expect(2) = 1e-23
 Identities = 52/131 (39%), Positives = 83/131 (63%)
 Frame = +2

Query: 71  GKLVQAHLHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCK 250
           GKL+ A + R    ++TFL+NRLI  Y KC +   A +LF QMP ++ +S++AIL  YCK
Sbjct: 25  GKLLHARIFRIGLSTDTFLLNRLIEFYFKCKNMGYAHNLFHQMPHKNIYSWNAILTEYCK 84

Query: 251 LNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSV 430
             +  NA+++F +MPERN+VSW  +I+A        +AL++   M+ +G+ P  +T +S+
Sbjct: 85  AGNLQNAHRLFSEMPERNIVSWNNLISALVRGRLEQQALDVYNEMIWEGLMPTHFTLASI 144

Query: 431 LRACEGFFNIK 463
           L AC    N++
Sbjct: 145 LSACGTLLNME 155



 Score = 26.9 bits (58), Expect(2) = 1e-23
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 3  QTKNASSLANVLQICINHKAHKAG 74
          + K    LAN+LQ CI+ KAH +G
Sbjct: 2  ERKATHYLANLLQSCIDKKAHLSG 25



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/73 (41%), Positives = 42/73 (57%)
 Frame = +2

Query: 224 HAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVR 403
           +++LD Y K  D  +A +VF  +PE +VVSW  MIA Y     + KA+E L  M   G  
Sbjct: 289 NSLLDMYAKDGDMDSAEEVFANLPEMSVVSWNVMIAGYGQKCKSGKAIEYLQRMQSCGFE 348

Query: 404 PNMYTYSSVLRAC 442
           P+  TY ++L AC
Sbjct: 349 PDEVTYINMLTAC 361


>ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
           gi|449475689|ref|XP_004154524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  114 bits (284), Expect = 2e-23
 Identities = 61/129 (47%), Positives = 80/129 (62%), Gaps = 4/129 (3%)
 Frame = +2

Query: 92  LHRTDQLSNTFLVNRLIALYSKCGDTAAAR----HLFDQMPLRDTFSYHAILDCYCKLND 259
           +HR    ++    + LI      G    AR    H+F       TF  + +++ Y K   
Sbjct: 7   MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66

Query: 260 SSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSVLRA 439
              A  +FD+MP+RNVVSWTTMI+AYSNS  N KAL+ LI+MLR+GVRPNMYTYSSVLRA
Sbjct: 67  LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126

Query: 440 CEGFFNIKQ 466
           C+G  N++Q
Sbjct: 127 CDGLLNLRQ 135


>gb|EXB40433.1| hypothetical protein L484_013736 [Morus notabilis]
          Length = 640

 Score =  112 bits (280), Expect = 5e-23
 Identities = 57/123 (46%), Positives = 81/123 (65%)
 Frame = +2

Query: 98  RTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCKLNDSSNAYQ 277
           R D ++ + L+   +A  +        RH+F       TF  + +++ Y K      A +
Sbjct: 68  RADSITYSELIKCCLARGAVEEGRIVHRHVFSNGYQPKTFLINVLINMYVKFGFLEEAQK 127

Query: 278 VFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSVLRACEGFFN 457
           +FD MPERNVVSWTT+IAAYSN++ N +ALE L++MLRDGV PNM+TYSSVLRAC+G +N
Sbjct: 128 LFDIMPERNVVSWTTIIAAYSNAKLNERALEFLVLMLRDGVMPNMFTYSSVLRACDGLWN 187

Query: 458 IKQ 466
           ++Q
Sbjct: 188 LRQ 190



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/85 (38%), Positives = 48/85 (56%)
 Frame = +2

Query: 188 FDQMPLRDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKAL 367
           FDQ    D    +A+LD YCK     +A  VF +M E++V+SW+TMIA  + +  + +AL
Sbjct: 299 FDQ----DLILNNALLDMYCKCGSFEDANIVFTKMVEKDVISWSTMIAGLAQNGFSQEAL 354

Query: 368 EMLIMMLRDGVRPNMYTYSSVLRAC 442
           ++   M   G +PN  T   VL AC
Sbjct: 355 KLFENMKVSGSKPNNITILGVLFAC 379


>ref|XP_006384866.1| hypothetical protein POPTR_0004s21780g [Populus trichocarpa]
           gi|550341634|gb|ERP62663.1| hypothetical protein
           POPTR_0004s21780g [Populus trichocarpa]
          Length = 571

 Score =  112 bits (279), Expect = 7e-23
 Identities = 53/95 (55%), Positives = 71/95 (74%)
 Frame = +2

Query: 182 HLFDQMPLRDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCK 361
           HL     +  TF  + +++ Y K     +A  VFD+MP+RNVVSWTTMI+AYS ++ N K
Sbjct: 27  HLISNGHVPKTFLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDK 86

Query: 362 ALEMLIMMLRDGVRPNMYTYSSVLRACEGFFNIKQ 466
           ALE L++MLR+GVRPNM+TYSSVLRAC+G FN++Q
Sbjct: 87  ALEFLVLMLREGVRPNMFTYSSVLRACDGLFNLRQ 121



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/79 (37%), Positives = 48/79 (60%)
 Frame = +2

Query: 206 RDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMM 385
           +D    +A+LD YCK     +A  VF +M E++V+SW+TMIA  + + ++ +AL++   M
Sbjct: 232 QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESM 291

Query: 386 LRDGVRPNMYTYSSVLRAC 442
              G++PN  T   VL AC
Sbjct: 292 KVLGIKPNYVTIVGVLFAC 310



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/80 (35%), Positives = 45/80 (56%)
 Frame = +2

Query: 209 DTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMML 388
           D F   A++D Y +  +  NA +VFD+M   ++V W+++IA ++ +    +AL +   M 
Sbjct: 134 DVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMK 193

Query: 389 RDGVRPNMYTYSSVLRACEG 448
           R G      T +SVLRAC G
Sbjct: 194 RAGFLAQQTTLTSVLRACTG 213


>ref|XP_002514406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546503|gb|EEF48002.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 436

 Score =  110 bits (276), Expect = 1e-22
 Identities = 53/96 (55%), Positives = 71/96 (73%)
 Frame = +2

Query: 179 RHLFDQMPLRDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNC 358
           +HL       + F  + +L+ Y K N    A  +FDQMPERNVVSWTTMI+A+SN++ N 
Sbjct: 81  KHLSSNGYQPNIFLINMLLNMYVKFNLLDEALTLFDQMPERNVVSWTTMISAFSNAKLND 140

Query: 359 KALEMLIMMLRDGVRPNMYTYSSVLRACEGFFNIKQ 466
           KALE LI MLR+GV+PN+YTYSS+LRAC+G +N++Q
Sbjct: 141 KALEFLICMLREGVKPNVYTYSSILRACDGVYNLRQ 176



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/79 (37%), Positives = 48/79 (60%)
 Frame = +2

Query: 206 RDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMM 385
           +D    +A+LD YCK     +A  VF +M E++V+SW+TMIA ++ + ++ +AL++   M
Sbjct: 287 QDLVLNNALLDMYCKCGSLEDANYVFTRMVEKDVISWSTMIAGFAQNGYSREALKLFESM 346

Query: 386 LRDGVRPNMYTYSSVLRAC 442
              G +PN  T   VL AC
Sbjct: 347 KVSGTKPNYITILGVLFAC 365



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/80 (33%), Positives = 45/80 (56%)
 Frame = +2

Query: 209 DTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMML 388
           D +   A++D Y K  +S NA  VF++M   +++ W ++IA ++ +    +AL +   M 
Sbjct: 189 DVYVRSALIDIYSKWGESENALYVFNEMVTGDLIVWNSIIAGFAQNNDGDEALNLFKSMK 248

Query: 389 RDGVRPNMYTYSSVLRACEG 448
           R+G   N    +SVLRAC G
Sbjct: 249 RNGFPANQSALTSVLRACTG 268


>ref|XP_004295443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Fragaria vesca subsp. vesca]
          Length = 768

 Score =  105 bits (261), Expect(2) = 4e-22
 Identities = 52/125 (41%), Positives = 75/125 (60%)
 Frame = +2

Query: 92  LHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCKLNDSSNA 271
           L   D   +TFL NRLI LYSKCG+   A ++FD+MP  D +S++A+L C CK      A
Sbjct: 29  LRHKDLFFDTFLSNRLIELYSKCGNLGYAHNVFDKMPKPDVYSWNAVLGCCCKAERLGEA 88

Query: 272 YQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSVLRACEGF 451
            ++F +MPERNVVSW T+I A        K L +   M+ +G+ P  +T +SV  AC G 
Sbjct: 89  EELFLRMPERNVVSWNTLIGALVRDGQEEKGLGVYEAMVSEGLVPTHFTLASVFSACGGL 148

Query: 452 FNIKQ 466
            ++++
Sbjct: 149 LDVEK 153



 Score = 25.0 bits (53), Expect(2) = 4e-22
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 15 ASSLANVLQICINHKAHKAG 74
          A+ LAN+LQ CI+ KA  AG
Sbjct: 2  ATWLANLLQGCIDRKAQLAG 21



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/78 (33%), Positives = 40/78 (51%)
 Frame = +2

Query: 209 DTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMML 388
           D F   A++  YCK  D   A   FD MP ++ V+W  MI  Y+ +    +A+ +   M+
Sbjct: 551 DVFVGSALIGMYCKCGDVDGARNFFDMMPSKSTVTWNEMIHGYAQNGRGDEAVLLYWDMI 610

Query: 389 RDGVRPNMYTYSSVLRAC 442
               RP+  T+ S+L AC
Sbjct: 611 ASAERPDAITFISILTAC 628


>ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321073|gb|EFH51494.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 579

 Score =  109 bits (272), Expect = 4e-22
 Identities = 51/95 (53%), Positives = 72/95 (75%)
 Frame = +2

Query: 179 RHLFDQMPLRDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNC 358
           RHL+        F  + +++ Y K N  ++A+Q+FDQMP+RNV+SWTTMI+AYS  + + 
Sbjct: 37  RHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQ 96

Query: 359 KALEMLIMMLRDGVRPNMYTYSSVLRACEGFFNIK 463
           KALE+L++MLRDGVRPN+YTYSSVLRAC G  +++
Sbjct: 97  KALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVR 131



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 29/79 (36%), Positives = 50/79 (63%)
 Frame = +2

Query: 206 RDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMM 385
           +D    +A++D YCK     +A +VF+QM ER+V++W+TMI+  + + ++ +AL++  +M
Sbjct: 243 QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELM 302

Query: 386 LRDGVRPNMYTYSSVLRAC 442
              G +PN  T   VL AC
Sbjct: 303 KSSGTKPNYITIVGVLFAC 321


>ref|XP_006290740.1| hypothetical protein CARUB_v10016836mg [Capsella rubella]
           gi|482559447|gb|EOA23638.1| hypothetical protein
           CARUB_v10016836mg [Capsella rubella]
          Length = 634

 Score =  108 bits (270), Expect = 7e-22
 Identities = 56/128 (43%), Positives = 83/128 (64%)
 Frame = +2

Query: 80  VQAHLHRTDQLSNTFLVNRLIALYSKCGDTAAARHLFDQMPLRDTFSYHAILDCYCKLND 259
           +Q+H    D  + + L+   +A  +        RHL+        F  + +++ Y K N 
Sbjct: 56  LQSHGLWADSATYSELIKCCLAHRAVHEGNLICRHLYFNGHQPMMFLVNVMINMYVKFNL 115

Query: 260 SSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRDGVRPNMYTYSSVLRA 439
            + A+Q+FDQMP+RNV+SWTTMI+AYS  + + KALE+L++MLRDGVRPN+YTYSSVLRA
Sbjct: 116 LNEAHQLFDQMPQRNVISWTTMISAYSKCKLHHKALELLVLMLRDGVRPNVYTYSSVLRA 175

Query: 440 CEGFFNIK 463
           C G  +++
Sbjct: 176 CNGMPDVR 183



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/79 (36%), Positives = 48/79 (60%)
 Frame = +2

Query: 206 RDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMM 385
           +D    +A++D YCK     +A +VF QM ER+V++W+TMI+  + + ++ +AL++   M
Sbjct: 295 QDLILNNALVDMYCKCGSLEDALRVFSQMKERDVITWSTMISGLAQNGYSQEALKLFESM 354

Query: 386 LRDGVRPNMYTYSSVLRAC 442
              G +PN  T   VL AC
Sbjct: 355 KSSGTKPNYITIVGVLFAC 373



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/80 (35%), Positives = 43/80 (53%)
 Frame = +2

Query: 209 DTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMML 388
           D F   A++D + KL +  +A  VFD+M   + + W ++I  ++ +  N  ALE+   M 
Sbjct: 197 DVFVRSALIDVFAKLGEPDDALSVFDEMVTGDAIVWNSVIGGFAQNSKNDVALELFKRMK 256

Query: 389 RDGVRPNMYTYSSVLRACEG 448
           R G      T +SVLRAC G
Sbjct: 257 RVGFIAEQATLTSVLRACTG 276


>ref|XP_004253182.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Solanum lycopersicum]
          Length = 654

 Score =  108 bits (270), Expect = 7e-22
 Identities = 53/96 (55%), Positives = 69/96 (71%)
 Frame = +2

Query: 179 RHLFDQMPLRDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNC 358
           +H+F       TF  + +++ Y K N    A  +FDQM ERNVVSWTTMIAAYS+++ N 
Sbjct: 109 QHVFSNGYEPKTFLVNTLMNMYVKFNMLEEAQALFDQMSERNVVSWTTMIAAYSSAKINN 168

Query: 359 KALEMLIMMLRDGVRPNMYTYSSVLRACEGFFNIKQ 466
           KALE LI M+RDGV+PNM+TYSSVLRAC+   N++Q
Sbjct: 169 KALEFLIFMMRDGVKPNMFTYSSVLRACDDLSNLRQ 204



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 35/79 (44%), Positives = 50/79 (63%)
 Frame = +2

Query: 206 RDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMM 385
           RD    +A+LD YCK  +  +A+Q+F QM E++V+SW+TMI  Y+ +  + KALE+   M
Sbjct: 315 RDLILDNALLDMYCKCGNLEDAHQIFSQMVEKDVISWSTMIIGYAQNGFSRKALELFKEM 374

Query: 386 LRDGVRPNMYTYSSVLRAC 442
              G+RPN  T   VL AC
Sbjct: 375 KVSGIRPNYITVLGVLFAC 393


>ref|XP_002328140.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  108 bits (269), Expect = 1e-21
 Identities = 50/84 (59%), Positives = 67/84 (79%)
 Frame = +2

Query: 215 FSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMMLRD 394
           F  + +++ Y K     +A  VFD+MP+RNVVSWTTMI+AYS ++ N KALE L++MLR+
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 395 GVRPNMYTYSSVLRACEGFFNIKQ 466
           GVRPNM+TYSSVLRAC+G FN++Q
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLRQ 84



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/79 (37%), Positives = 48/79 (60%)
 Frame = +2

Query: 206 RDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMM 385
           +D    +A+LD YCK     +A  VF +M E++V+SW+TMIA  + + ++ +AL++   M
Sbjct: 195 QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESM 254

Query: 386 LRDGVRPNMYTYSSVLRAC 442
              G++PN  T   VL AC
Sbjct: 255 KVLGIKPNYVTIVGVLFAC 273



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/80 (35%), Positives = 45/80 (56%)
 Frame = +2

Query: 209 DTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMML 388
           D F   A++D Y +  +  NA +VFD+M   ++V W+++IA ++ +    +AL +   M 
Sbjct: 97  DVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMK 156

Query: 389 RDGVRPNMYTYSSVLRACEG 448
           R G      T +SVLRAC G
Sbjct: 157 RAGFLAQQTTLTSVLRACTG 176


>ref|XP_006342434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like isoform X1 [Solanum tuberosum]
          Length = 654

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/96 (54%), Positives = 70/96 (72%)
 Frame = +2

Query: 179 RHLFDQMPLRDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNC 358
           +H+F       TF  + +++ Y K N    A  +FDQM +RNVVSWTTMIAAYS+++ N 
Sbjct: 109 QHVFSNGYEPKTFLVNTLMNMYVKFNMLDEAQALFDQMSDRNVVSWTTMIAAYSSAKINN 168

Query: 359 KALEMLIMMLRDGVRPNMYTYSSVLRACEGFFNIKQ 466
           KALE LI+M+RDGVRPNM+T+SSVLRAC+   N++Q
Sbjct: 169 KALEFLILMMRDGVRPNMFTFSSVLRACDDLSNLRQ 204



 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 35/79 (44%), Positives = 50/79 (63%)
 Frame = +2

Query: 206 RDTFSYHAILDCYCKLNDSSNAYQVFDQMPERNVVSWTTMIAAYSNSEHNCKALEMLIMM 385
           RD    +A+LD YCK  +  +A+Q+F QM E++V+SW+TMI  Y+ +  + KALE+   M
Sbjct: 315 RDLILDNALLDMYCKCGNLEDAHQIFSQMVEKDVISWSTMIIGYAQNGFSRKALELFKEM 374

Query: 386 LRDGVRPNMYTYSSVLRAC 442
              G+RPN  T   VL AC
Sbjct: 375 KVSGIRPNYITVLGVLFAC 393