BLASTX nr result
ID: Rehmannia25_contig00024873
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00024873
(393 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 125 8e-27
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 124 1e-26
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 122 4e-26
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 111 9e-23
gb|EXB31117.1| hypothetical protein L484_004590 [Morus notabilis] 111 1e-22
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera] 109 3e-22
gb|EXC14993.1| hypothetical protein L484_008147 [Morus notabilis] 108 1e-21
gb|EXC30801.1| hypothetical protein L484_027980 [Morus notabilis] 104 1e-20
emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera] 102 7e-20
gb|AAO73240.1| putative polyprotein [Oryza sativa Japonica Group... 100 2e-19
gb|EXB39670.1| hypothetical protein L484_017145 [Morus notabilis] 100 3e-19
dbj|BAA22288.1| polyprotein [Oryza australiensis] 96 4e-18
emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group] gi... 96 4e-18
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap... 96 6e-18
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 92 7e-17
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 91 2e-16
gb|AAD17357.1| contains similarity to retrovirus-related polypro... 91 2e-16
gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japoni... 89 5e-16
gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subc... 89 5e-16
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 89 6e-16
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 125 bits (313), Expect = 8e-27
Identities = 59/75 (78%), Positives = 63/75 (84%)
Frame = +3
Query: 6 TLYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSL 185
TLYCDNSGAVA SKEPR HKR KHIERKYHLIRD +QRGD +V+KIASE NLADPFTKSL
Sbjct: 1464 TLYCDNSGAVANSKEPRSHKRAKHIERKYHLIRDIVQRGDVVVMKIASENNLADPFTKSL 1523
Query: 186 PERVFERHVNSMGLK 230
FERHV MG+K
Sbjct: 1524 SSTTFERHVEGMGVK 1538
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 124 bits (312), Expect = 1e-26
Identities = 59/75 (78%), Positives = 63/75 (84%)
Frame = +3
Query: 6 TLYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSL 185
TLYCDNSGAVA SKEPR HKR KHIERKYHLIRD +QRGD +V+KIASE NLADPFTKSL
Sbjct: 553 TLYCDNSGAVANSKEPRSHKRAKHIERKYHLIRDIVQRGDXVVMKIASENNLADPFTKSL 612
Query: 186 PERVFERHVNSMGLK 230
FERHV MG+K
Sbjct: 613 SSXTFERHVEGMGVK 627
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 122 bits (307), Expect = 4e-26
Identities = 58/75 (77%), Positives = 62/75 (82%)
Frame = +3
Query: 6 TLYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSL 185
TLYCDNSGAVA SKEPR HKR KHI RKYHLIRD +QRGD +V+KIASE NLADPFTKSL
Sbjct: 1205 TLYCDNSGAVANSKEPRSHKRAKHIXRKYHLIRDIVQRGDVVVMKIASENNLADPFTKSL 1264
Query: 186 PERVFERHVNSMGLK 230
FERHV MG+K
Sbjct: 1265 SSTTFERHVEGMGVK 1279
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 111 bits (278), Expect = 9e-23
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGAVA +KEPR H++ KHIERK+HL+R+ + RGD V KIAS N+ADPFTK+LP
Sbjct: 589 LYCDNSGAVANAKEPRNHRKGKHIERKFHLVREIVSRGDVSVEKIASANNIADPFTKTLP 648
Query: 189 ERVFERHVNSMGLKRVTDLL 248
R FE+H+ MGL+ ++ L+
Sbjct: 649 ARSFEQHLEGMGLREMSHLI 668
>gb|EXB31117.1| hypothetical protein L484_004590 [Morus notabilis]
Length = 86
Score = 111 bits (277), Expect = 1e-22
Identities = 51/79 (64%), Positives = 61/79 (77%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSG VA SKEPR HK HIERKYHLIRD + RG+ V+K ASE NLADPFTK+LP
Sbjct: 7 LYCDNSGMVANSKEPRSHKSANHIERKYHLIRDIVDRGNVAVLKTASENNLADPFTKTLP 66
Query: 189 ERVFERHVNSMGLKRVTDL 245
VF+RH++ G++ +T L
Sbjct: 67 LNVFDRHLDGFGIRDMTHL 85
>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
Length = 961
Score = 109 bits (273), Expect = 3e-22
Identities = 48/80 (60%), Positives = 64/80 (80%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGAVA +KEP+ H++ KHIERK+HL+R+ + RGD +V IAS N+ADPFTK+LP
Sbjct: 882 LYCDNSGAVANAKEPKNHRKGKHIERKFHLVREIVSRGDVLVENIASANNIADPFTKTLP 941
Query: 189 ERVFERHVNSMGLKRVTDLL 248
R FE+H+ MGL+ ++ LL
Sbjct: 942 TRSFEQHLEGMGLRDMSHLL 961
>gb|EXC14993.1| hypothetical protein L484_008147 [Morus notabilis]
Length = 175
Score = 108 bits (269), Expect = 1e-21
Identities = 51/80 (63%), Positives = 60/80 (75%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGAVA SKEPR HKR KHIERKYHLIR+ +QRGD V KI+ +NLADPFTK+L
Sbjct: 96 LYCDNSGAVANSKEPRSHKRSKHIERKYHLIREIVQRGDVEVTKISIHDNLADPFTKALS 155
Query: 189 ERVFERHVNSMGLKRVTDLL 248
+VF H+ ++ T LL
Sbjct: 156 GKVFVSHLEGFRMRDCTHLL 175
>gb|EXC30801.1| hypothetical protein L484_027980 [Morus notabilis]
Length = 225
Score = 104 bits (259), Expect = 1e-20
Identities = 47/80 (58%), Positives = 61/80 (76%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGAVA +KEPR H++ KHIERK+HL+R+ + RGD V K+AS N+ADPF K+LP
Sbjct: 146 LYCDNSGAVANAKEPRNHRKGKHIERKFHLVREIVSRGDVSVEKVASANNIADPFIKTLP 205
Query: 189 ERVFERHVNSMGLKRVTDLL 248
FERH+ +M L+ + LL
Sbjct: 206 AGSFERHLENMRLRDMPHLL 225
>emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera]
Length = 230
Score = 102 bits (253), Expect = 7e-20
Identities = 46/80 (57%), Positives = 59/80 (73%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGAVA +KEPR H++ KHIERK+HL+R + RGD V I N+ADPFTK+LP
Sbjct: 151 LYCDNSGAVANAKEPRNHRKGKHIERKFHLVRKVVSRGDVSVENITYANNIADPFTKTLP 210
Query: 189 ERVFERHVNSMGLKRVTDLL 248
R E+H+ MGL+ ++ LL
Sbjct: 211 ARSLEQHLEGMGLRDMSHLL 230
>gb|AAO73240.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108709205|gb|ABF97000.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 146
Score = 100 bits (250), Expect = 2e-19
Identities = 47/90 (52%), Positives = 64/90 (71%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGAVA++K+PR H++ KHI R+YHLIR+ + RGD + KI ++ N+ADP TK LP
Sbjct: 56 LYCDNSGAVAQAKKPRSHQKSKHILRRYHLIREIVGRGDVKICKIHTDLNVADPLTKPLP 115
Query: 189 ERVFERHVNSMGLKRVTDLL*SKWEIVSFM 278
+ E +MG++ + D L KWE VS M
Sbjct: 116 QPKNEAQTRAMGIRFIHDWLECKWETVSDM 145
>gb|EXB39670.1| hypothetical protein L484_017145 [Morus notabilis]
Length = 139
Score = 100 bits (248), Expect = 3e-19
Identities = 46/79 (58%), Positives = 57/79 (72%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGAVA K+P+ HK KHIERK HLIRD + RGD V++IASE NL +PF K+LP
Sbjct: 60 LYCDNSGAVANLKKPKSHKNAKHIERKCHLIRDIVDRGDVAVLQIASENNLVNPFMKTLP 119
Query: 189 ERVFERHVNSMGLKRVTDL 245
F RH+ G++ +T L
Sbjct: 120 LNEFNRHLEGFGIRDMTHL 138
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 96.3 bits (238), Expect = 4e-18
Identities = 40/79 (50%), Positives = 59/79 (74%)
Frame = +3
Query: 6 TLYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSL 185
+LYCDNSGA+A++KEPR H++ KHI R+YHLIR+ + RGD + K+ ++ N+ADP TK L
Sbjct: 1239 SLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVDRGDVKICKVHTDLNIADPLTKPL 1298
Query: 186 PERVFERHVNSMGLKRVTD 242
P+ E H +MG++ + D
Sbjct: 1299 PQPKHEAHTRAMGIRYLHD 1317
>emb|CAE02400.1| OSJNBa0024J22.4 [Oryza sativa Japonica Group]
gi|38347202|emb|CAD40526.2| OSJNBa0023J03.14 [Oryza
sativa Japonica Group] gi|116308930|emb|CAH66059.1|
OSIGBa0125J07.8 [Oryza sativa Indica Group]
gi|116309043|emb|CAH66155.1| OSIGBa0113B06.1 [Oryza
sativa Indica Group]
Length = 704
Score = 96.3 bits (238), Expect = 4e-18
Identities = 42/78 (53%), Positives = 58/78 (74%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGA+A++KEPR H++ KHI R+YHLIR+ + RGD + KI ++ N+ADP TK LP
Sbjct: 627 LYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVGRGDVKICKIHTDLNVADPLTKPLP 686
Query: 189 ERVFERHVNSMGLKRVTD 242
+ E H +MG++ V D
Sbjct: 687 QPKHEAHTRAMGIRYVHD 704
>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|62701883|gb|AAX92956.1| retrotransposon protein,
putative, Ty1-copia sub-class [Oryza sativa Japonica
Group] gi|108864259|gb|ABA92827.2| retrotransposon
protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1184
Score = 95.5 bits (236), Expect = 6e-18
Identities = 41/78 (52%), Positives = 58/78 (74%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGA+A++KEPR H++ KHI R+YHLIR+ + RGD + KI ++ N+ADP TK LP
Sbjct: 1107 LYCDNSGAIAQAKEPRSHQKSKHILRQYHLIREIVGRGDVKICKIHTDLNVADPLTKPLP 1166
Query: 189 ERVFERHVNSMGLKRVTD 242
+ E H +MG++ + D
Sbjct: 1167 QPKHEAHTRAMGIRYIHD 1184
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 92.0 bits (227), Expect = 7e-17
Identities = 36/74 (48%), Positives = 58/74 (78%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDN+GA+A++KEP+ H++ KHI+R+YHLIR+ I RGD + +++++ N+AD FTK LP
Sbjct: 887 LYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKPLP 946
Query: 189 ERVFERHVNSMGLK 230
+ E H ++G++
Sbjct: 947 QPKHESHTTAIGIR 960
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 90.9 bits (224), Expect = 2e-16
Identities = 38/78 (48%), Positives = 57/78 (73%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDN+GA+A++KEPR H++ KHI R+YHLIR+ + RGD + KI ++ N+ADP TK L
Sbjct: 1236 LYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKIHTDLNVADPLTKPLT 1295
Query: 189 ERVFERHVNSMGLKRVTD 242
+ E H ++G++ + D
Sbjct: 1296 QPKHEAHTRAIGIRYLND 1313
>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
thaliana] gi|7267382|emb|CAB77943.1| putative transposon
protein [Arabidopsis thaliana]
Length = 769
Score = 90.5 bits (223), Expect = 2e-16
Identities = 36/74 (48%), Positives = 56/74 (75%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDN+GA+A++KE R H++ KHI+R+YHLIR+ I RGD + +++++ N+ DPFTK LP
Sbjct: 692 LYCDNNGAIAQTKERRSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVTDPFTKPLP 751
Query: 189 ERVFERHVNSMGLK 230
+ E H +G++
Sbjct: 752 QPKHESHTTVIGIR 765
>gb|AAO37490.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|41393192|gb|AAS01915.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 547
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGA+A++KEPR H++ K+I R YHLIR+ + RGD + KI S+ N+ADP K +P
Sbjct: 470 LYCDNSGAIAQAKEPRSHQKSKYILRWYHLIREIVGRGDVKICKIHSDLNVADPLIKPVP 529
Query: 189 ERVFERHVNSMGLKRVTD 242
+ E H +MG++ + D
Sbjct: 530 QPKHEAHTRAMGIRYIHD 547
>gb|ABF96975.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 562
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDNSGA+A++KEPR H++ K+I R YHLIR+ + RGD + KI S+ N+ADP K +P
Sbjct: 485 LYCDNSGAIAQAKEPRSHQKSKYILRWYHLIREIVGRGDVKICKIHSDLNVADPLIKPVP 544
Query: 189 ERVFERHVNSMGLKRVTD 242
+ E H +MG++ + D
Sbjct: 545 QPKHEAHTRAMGIRYIHD 562
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 89.0 bits (219), Expect = 6e-16
Identities = 36/74 (48%), Positives = 55/74 (74%)
Frame = +3
Query: 9 LYCDNSGAVARSKEPRFHKRQKHIERKYHLIRDFIQRGDTMVVKIASEENLADPFTKSLP 188
LYCDN+GA+A++KEPR H++ KHI R+YHLIR+ + RGD + K+ ++ N+ADP TK L
Sbjct: 820 LYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICKVHTDLNIADPLTKPLT 879
Query: 189 ERVFERHVNSMGLK 230
+ E H ++G++
Sbjct: 880 QPKHEAHTRAIGIR 893