BLASTX nr result

ID: Rehmannia25_contig00024833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00024833
         (477 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360604.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    82   6e-14
ref|XP_004234756.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    81   1e-13
ref|XP_002323346.1| DEAD box RNA helicase family protein [Populu...    68   1e-09
gb|EXB86900.1| DEAD-box ATP-dependent RNA helicase 37 [Morus not...    64   3e-08
ref|XP_006293841.1| hypothetical protein CARUB_v10022826mg [Caps...    63   4e-08
gb|EMJ05421.1| hypothetical protein PRUPE_ppa002926mg [Prunus pe...    62   6e-08
ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    62   6e-08
gb|AAO42134.1| putative DEAD/DEAH box RNA helicase [Arabidopsis ...    61   1e-07
emb|CBI16498.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    61   1e-07
ref|NP_181780.1| DEAD-box ATP-dependent RNA helicase 37 [Arabido...    61   1e-07
ref|XP_006383908.1| hypothetical protein POPTR_0004s01130g [Popu...    61   2e-07
ref|XP_002332609.1| predicted protein [Populus trichocarpa]            61   2e-07
ref|XP_004294989.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   2e-07
ref|XP_006411510.1| hypothetical protein EUTSA_v10016388mg [Eutr...    60   3e-07
ref|XP_002304009.2| hypothetical protein POPTR_0003s21330g [Popu...    60   4e-07
ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    60   4e-07
gb|EMJ09232.1| hypothetical protein PRUPE_ppa002959mg [Prunus pe...    57   2e-06
gb|EMJ09231.1| hypothetical protein PRUPE_ppa002959mg [Prunus pe...    57   2e-06
ref|XP_002879990.1| hypothetical protein ARALYDRAFT_483345 [Arab...    56   6e-06

>ref|XP_006360604.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like isoform X1
           [Solanum tuberosum] gi|565389735|ref|XP_006360605.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like
           isoform X2 [Solanum tuberosum]
          Length = 618

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 42/83 (50%), Positives = 52/83 (62%)
 Frame = -2

Query: 326 MRTSWADAVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXXXXXXX 147
           MR SWAD+VENVAT   DN G SGG+   ++  +S+YVPPHLRN+               
Sbjct: 1   MRNSWADSVENVAT---DNGGPSGGSGASASTRRSSYVPPHLRNKPMTAEPLAPLHGGPP 57

Query: 146 SRNDRFGYSGPTSGSQWAGSRSD 78
           S NDR G++GPTSG +W GSR D
Sbjct: 58  SGNDRSGFNGPTSGPRWGGSRPD 80


>ref|XP_004234756.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Solanum
           lycopersicum]
          Length = 612

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 42/83 (50%), Positives = 51/83 (61%)
 Frame = -2

Query: 326 MRTSWADAVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXXXXXXX 147
           MR SWAD+VENVAT   DN G SG +   ++  +S+YVPPHLRNR               
Sbjct: 1   MRNSWADSVENVAT---DNGGPSGASGASASTRRSSYVPPHLRNRPMTAEPLAPSHGGPP 57

Query: 146 SRNDRFGYSGPTSGSQWAGSRSD 78
           S NDR G++GPTSG +W GSR D
Sbjct: 58  SGNDRSGFNGPTSGPRWGGSRPD 80


>ref|XP_002323346.1| DEAD box RNA helicase family protein [Populus trichocarpa]
           gi|222867976|gb|EEF05107.1| DEAD box RNA helicase family
           protein [Populus trichocarpa]
          Length = 611

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/79 (41%), Positives = 45/79 (56%)
 Frame = -2

Query: 326 MRTSWADAVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXXXXXXX 147
           MRTSW+D+V N A+ ++  +G+SG       PT++ Y+PPHLRN+               
Sbjct: 1   MRTSWSDSVANSASENAAASGSSGPR-----PTRATYIPPHLRNQPPSSDSLAPPPAAPS 55

Query: 146 SRNDRFGYSGPTSGSQWAG 90
             NDR GYSGP  GS+W G
Sbjct: 56  LGNDRVGYSGPVGGSRWGG 74


>gb|EXB86900.1| DEAD-box ATP-dependent RNA helicase 37 [Morus notabilis]
          Length = 612

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/84 (44%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
 Frame = -2

Query: 326 MRTSWADAVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXXXXXXX 147
           M TSWAD+V N     S +   + GN   S P +S+YVPPHLRNR               
Sbjct: 1   MSTSWADSVAN-----SQSENVAAGNTAASRPARSSYVPPHLRNRPPSSDPPAPSNSVP- 54

Query: 146 SRNDRFGYSGPTSGSQW-AGSRSD 78
              DR GY GP+SGS+W  GSR D
Sbjct: 55  --GDRAGYGGPSSGSRWNGGSRPD 76


>ref|XP_006293841.1| hypothetical protein CARUB_v10022826mg [Capsella rubella]
           gi|482562549|gb|EOA26739.1| hypothetical protein
           CARUB_v10022826mg [Capsella rubella]
          Length = 624

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/82 (43%), Positives = 44/82 (53%)
 Frame = -2

Query: 326 MRTSWADAVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXXXXXXX 147
           M  SWAD  +      S+NAG+   N+N S P++ AYVPPHLRNR               
Sbjct: 1   MSASWADVAD------SENAGSGSSNQN-SHPSRPAYVPPHLRNR-----QPTSDPVAPL 48

Query: 146 SRNDRFGYSGPTSGSQWAGSRS 81
             NDR G+ GP SGS+WA S S
Sbjct: 49  PANDRLGFGGPPSGSRWAPSAS 70


>gb|EMJ05421.1| hypothetical protein PRUPE_ppa002926mg [Prunus persica]
          Length = 621

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/87 (41%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
 Frame = -2

Query: 326 MRTSWADAV-----ENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXX 162
           MRTSWAD+V     EN  TG+SDN        +   P +S YVPPHLRNR          
Sbjct: 1   MRTSWADSVANSQVENPTTGASDN-------NSSFRPARSTYVPPHLRNRPPSSEPPAPS 53

Query: 161 XXXXXSRNDRFGYSGPTSGSQWAGSRS 81
                  NDR G SGP +G  W    S
Sbjct: 54  QSAPPPANDRVGNSGPAAGPAWGAGSS 80


>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 622

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
 Frame = -2

Query: 326 MRTSWADAV-----ENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXX 162
           MRTSWAD+V     +N+ +GSSDN+G   G   PS   +S+YVPPHLRNR          
Sbjct: 1   MRTSWADSVANSTSDNLVSGSSDNSGFGAGA--PSRSGRSSYVPPHLRNRPPSSDPPAPS 58

Query: 161 XXXXXSRNDRFGYSGPTSGSQW-AGSRSD 78
                S     GY GP  G++W  GSR+D
Sbjct: 59  YTSQASA----GYGGPPGGTRWGGGSRAD 83


>gb|AAO42134.1| putative DEAD/DEAH box RNA helicase [Arabidopsis thaliana]
          Length = 633

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/78 (46%), Positives = 41/78 (52%)
 Frame = -2

Query: 326 MRTSWADAVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXXXXXXX 147
           M  SWAD  ++  TGS    G+S  N +PS P   AYVPPHLRNR               
Sbjct: 1   MSASWADVADSENTGS----GSSNQNSHPSRP---AYVPPHLRNR-----PAASEPVAPL 48

Query: 146 SRNDRFGYSGPTSGSQWA 93
             NDR GY GP SGS+WA
Sbjct: 49  PANDRVGYGGPPSGSRWA 66


>emb|CBI16498.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/88 (43%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
 Frame = -2

Query: 326 MRTSWADAV-----ENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXX 162
           MR+SWAD+V     ENVA GSS     S G    + PT+ AY+PPHLRN           
Sbjct: 1   MRSSWADSVVNSAAENVAAGSS----ASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPA 56

Query: 161 XXXXXSRNDRFGYSGPTSGSQWAGSRSD 78
                S NDR GY    SG++W G R+D
Sbjct: 57  YSGPSSANDRSGY----SGNRWGGPRND 80


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
           gi|147854540|emb|CAN78578.1| hypothetical protein
           VITISV_013679 [Vitis vinifera]
          Length = 612

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/88 (43%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
 Frame = -2

Query: 326 MRTSWADAV-----ENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXX 162
           MR+SWAD+V     ENVA GSS     S G    + PT+ AY+PPHLRN           
Sbjct: 1   MRSSWADSVVNSAAENVAAGSS----ASNGVATAAKPTRGAYIPPHLRNLTPSSEPPAPA 56

Query: 161 XXXXXSRNDRFGYSGPTSGSQWAGSRSD 78
                S NDR GY    SG++W G R+D
Sbjct: 57  YSGPSSANDRSGY----SGNRWGGPRND 80


>ref|NP_181780.1| DEAD-box ATP-dependent RNA helicase 37 [Arabidopsis thaliana]
           gi|108861890|sp|Q84W89.2|RH37_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 37
           gi|4559339|gb|AAD23001.1| putative ATP-dependent RNA
           helicase [Arabidopsis thaliana]
           gi|330255039|gb|AEC10133.1| DEAD-box ATP-dependent RNA
           helicase 37 [Arabidopsis thaliana]
          Length = 633

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 36/78 (46%), Positives = 41/78 (52%)
 Frame = -2

Query: 326 MRTSWADAVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXXXXXXX 147
           M  SWAD  ++  TGS    G+S  N +PS P   AYVPPHLRNR               
Sbjct: 1   MSASWADVADSENTGS----GSSNQNSHPSRP---AYVPPHLRNR-----PAASEPVAPL 48

Query: 146 SRNDRFGYSGPTSGSQWA 93
             NDR GY GP SGS+WA
Sbjct: 49  PANDRVGYGGPPSGSRWA 66


>ref|XP_006383908.1| hypothetical protein POPTR_0004s01130g [Populus trichocarpa]
           gi|550340058|gb|ERP61705.1| hypothetical protein
           POPTR_0004s01130g [Populus trichocarpa]
          Length = 251

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/86 (44%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
 Frame = -2

Query: 323 RTSWADAVENVATGSSDNAGTSGGNENP----SAPTKSAYVPPHLRNRXXXXXXXXXXXX 156
           R+SWAD   N A   + NAG+S  NE+     +APT+S YVPPHLRNR            
Sbjct: 4   RSSWADLASNSADERT-NAGSSANNESVGTAGNAPTRSTYVPPHLRNRAPSSDPPAAAFS 62

Query: 155 XXXSRNDRFGYSGPTSGSQWAGSRSD 78
              S NDR GY G   GS+W   R+D
Sbjct: 63  GPASSNDRPGYGG---GSRWGVPRND 85


>ref|XP_002332609.1| predicted protein [Populus trichocarpa]
          Length = 168

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/86 (44%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
 Frame = -2

Query: 323 RTSWADAVENVATGSSDNAGTSGGNENP----SAPTKSAYVPPHLRNRXXXXXXXXXXXX 156
           R+SWAD   N A   + NAG+S  NE+     +APT+S YVPPHLRNR            
Sbjct: 4   RSSWADLASNSADERT-NAGSSANNESVGTAGNAPTRSTYVPPHLRNRAPSSDPPAAAFS 62

Query: 155 XXXSRNDRFGYSGPTSGSQWAGSRSD 78
              S NDR GY G   GS+W   R+D
Sbjct: 63  GPASSNDRPGYGG---GSRWGVPRND 85


>ref|XP_004294989.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Fragaria
           vesca subsp. vesca]
          Length = 622

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/84 (44%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
 Frame = -2

Query: 326 MRTSWAD-----AVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXX 162
           MR SWAD     A ENV +GSS N+  +GG     A ++S YVPPHLRNR          
Sbjct: 1   MRASWADLAANSAAENVGSGSSANSA-AGGAPAAGAASRSTYVPPHLRNRPPPSLDAPAP 59

Query: 161 XXXXXSRNDRFGYSGPTSGSQWAG 90
                + NDR GY G   GS+W G
Sbjct: 60  AFNAPAGNDRGGYGG---GSRWGG 80


>ref|XP_006411510.1| hypothetical protein EUTSA_v10016388mg [Eutrema salsugineum]
           gi|557112679|gb|ESQ52963.1| hypothetical protein
           EUTSA_v10016388mg [Eutrema salsugineum]
          Length = 621

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/78 (44%), Positives = 41/78 (52%)
 Frame = -2

Query: 326 MRTSWADAVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXXXXXXX 147
           M  SWAD  ++  TGS    G++  N +PS P   AYVPPHLRNR               
Sbjct: 1   MSASWADVADSENTGS----GSTSQNSHPSRP---AYVPPHLRNR-----QASSEPVAPL 48

Query: 146 SRNDRFGYSGPTSGSQWA 93
             NDR GY GP SGS+WA
Sbjct: 49  PANDRVGYGGPPSGSRWA 66


>ref|XP_002304009.2| hypothetical protein POPTR_0003s21330g [Populus trichocarpa]
           gi|550343697|gb|EEE78988.2| hypothetical protein
           POPTR_0003s21330g [Populus trichocarpa]
          Length = 624

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
 Frame = -2

Query: 323 RTSWAD-----AVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXXX 159
           R+SWAD     A E+   GSS N G S G  + +APT+  YVPPHLRNR           
Sbjct: 4   RSSWADLAANSAAESTKAGSSANNG-SVGTTSGNAPTRPTYVPPHLRNRVPSSDPPAAAY 62

Query: 158 XXXXSRNDRFGYSGPTSGSQWAGSRSD 78
               S NDR GY G   GS+W   R+D
Sbjct: 63  SGPASSNDRSGYGG---GSRWGVPRND 86


>ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Cucumis
           sativus]
          Length = 625

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 39/86 (45%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
 Frame = -2

Query: 326 MRTSWAD-----AVENVATGSSDN--AGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXX 168
           MRTSWAD     A ENVA GS++N  AGT+      +AP +SAYVPPHLRNR        
Sbjct: 1   MRTSWADLAASSAAENVAAGSANNCSAGTT------TAPGRSAYVPPHLRNRTAPADLPA 54

Query: 167 XXXXXXXSRNDRFGYSGPTSGSQWAG 90
                    NDR G+    +GS+W G
Sbjct: 55  AANSGPAVGNDRSGH----AGSRWGG 76


>gb|EMJ09232.1| hypothetical protein PRUPE_ppa002959mg [Prunus persica]
          Length = 617

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
 Frame = -2

Query: 326 MRTSWAD-----AVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXX 162
           MRTSWAD     A EN  +G S +   +G     +APT+S YVPPHLRNR          
Sbjct: 1   MRTSWADLAANSAAENATSGPSASNAVAG---TAAAPTRSTYVPPHLRNR-PPSADPPAP 56

Query: 161 XXXXXSRNDRFGYSGPTSGSQWAGSRSD 78
                  NDR G+    SGS+W G R+D
Sbjct: 57  AYTGPPANDRGGF----SGSRWGGPRND 80


>gb|EMJ09231.1| hypothetical protein PRUPE_ppa002959mg [Prunus persica]
          Length = 459

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/88 (42%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
 Frame = -2

Query: 326 MRTSWAD-----AVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXX 162
           MRTSWAD     A EN  +G S +   +G     +APT+S YVPPHLRNR          
Sbjct: 1   MRTSWADLAANSAAENATSGPSASNAVAG---TAAAPTRSTYVPPHLRNR-PPSADPPAP 56

Query: 161 XXXXXSRNDRFGYSGPTSGSQWAGSRSD 78
                  NDR G+    SGS+W G R+D
Sbjct: 57  AYTGPPANDRGGF----SGSRWGGPRND 80


>ref|XP_002879990.1| hypothetical protein ARALYDRAFT_483345 [Arabidopsis lyrata subsp.
           lyrata] gi|297325829|gb|EFH56249.1| hypothetical protein
           ARALYDRAFT_483345 [Arabidopsis lyrata subsp. lyrata]
          Length = 627

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/78 (41%), Positives = 40/78 (51%)
 Frame = -2

Query: 326 MRTSWADAVENVATGSSDNAGTSGGNENPSAPTKSAYVPPHLRNRXXXXXXXXXXXXXXX 147
           M  SWAD  +      S+N G+   N+N S P++ AYVPPHLRNR               
Sbjct: 1   MSASWADVAD------SENTGSGSFNQN-SHPSRPAYVPPHLRNR-----PATSEPVAPL 48

Query: 146 SRNDRFGYSGPTSGSQWA 93
             NDR G+ GP S S+WA
Sbjct: 49  PANDRVGFGGPPSASRWA 66


Top