BLASTX nr result
ID: Rehmannia25_contig00024736
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00024736
(1143 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containi... 571 e-160
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 555 e-156
gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus pe... 546 e-153
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi... 538 e-150
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr... 538 e-150
gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis] 530 e-148
gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily p... 530 e-148
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 526 e-147
ref|XP_004508527.1| PREDICTED: pentatricopeptide repeat-containi... 525 e-146
ref|XP_002324235.2| pentatricopeptide repeat-containing family p... 523 e-146
gb|ESW26970.1| hypothetical protein PHAVU_003G162300g [Phaseolus... 522 e-145
ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t... 520 e-145
ref|XP_003525660.2| PREDICTED: pentatricopeptide repeat-containi... 516 e-144
gb|AEP33759.1| organelle transcript processing 82, partial [Bras... 483 e-134
gb|AEP33770.1| organelle transcript processing 82, partial [Raph... 481 e-133
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc... 479 e-132
gb|AEP33771.1| organelle transcript processing 82, partial [Thla... 477 e-132
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha... 477 e-132
gb|AEP33769.1| organelle transcript processing 82, partial [Olim... 477 e-132
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu... 476 e-132
>ref|XP_006364895.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Solanum tuberosum]
Length = 731
Score = 571 bits (1472), Expect = e-160
Identities = 265/359 (73%), Positives = 317/359 (88%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLGKW+H+YI+KHYQ N +LWTSLINMYAKCG I AAK +F M+ K+LAS+N MI
Sbjct: 373 ALDLGKWIHVYIDKHYQHLQNTSLWTSLINMYAKCGAIAAAKQVFQGMKMKTLASYNVMI 432
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
SGLAMHG+A A++LF +M +E ++PD+ITFVSVLSAC H+GL +LGRE+FN+MI Y
Sbjct: 433 SGLAMHGDAYEALELFRKMTEESMKPDDITFVSVLSACNHAGLVDLGREYFNTMIQSYKY 492
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASE 542
P+LQHYGCMIDLL RAG F+EAM+++E ME++PDGAIWGS+LG+CRI+KNLEL EYA++
Sbjct: 493 TPKLQHYGCMIDLLGRAGKFDEAMTMIESMEIKPDGAIWGSLLGSCRIHKNLELGEYAAK 552
Query: 543 KLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEFL 722
LF+LEP+NPGAY+LLSNIYAG G WDKVA IRTFLND+G+KKVPG TSIE+D VVHEFL
Sbjct: 553 NLFELEPENPGAYVLLSNIYAGAGNWDKVASIRTFLNDQGMKKVPGCTSIEIDRVVHEFL 612
Query: 723 VSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAYG 902
VSDRTH +S +IY+ML+EVDRLLEMAGH DTSEV+Y++DEEWKE L +HSEKLAIA+G
Sbjct: 613 VSDRTHPQSNDIYKMLDEVDRLLEMAGHAPDTSEVHYEMDEEWKEEKLNQHSEKLAIAFG 672
Query: 903 LISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
LISTKPGTTLRIVKNLRVCGNCH ATK+ISKIF+REIIARDR+RFHHFK+G CSC+DYW
Sbjct: 673 LISTKPGTTLRIVKNLRVCGNCHEATKMISKIFNREIIARDRNRFHHFKNGSCSCLDYW 731
Score = 96.7 bits (239), Expect = 2e-17
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 34/199 (17%)
Frame = +3
Query: 6 LDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMIS 185
L LG WV +IE H N L +LI+MYAKCG+++ A+ +F ++ K L SWN MI
Sbjct: 273 LKLGNWVRSWIEDHGLGL-NIRLVNALIDMYAKCGDVKTARMLFEGLEEKDLVSWNVMIG 331
Query: 186 GLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGR------------- 326
G G A+ +F M +E + P+++T +S+L AC H G +LG+
Sbjct: 332 GYTHTGYYKDALSVFHRMQQEVIDPNDVTLLSILPACAHLGALDLGKWIHVYIDKHYQHL 391
Query: 327 ---EFFNSMIHDY----------NIF-----PQLQHYGCMIDLLARAGLFEEAMSLVERM 452
+ S+I+ Y +F L Y MI LA G EA+ L +M
Sbjct: 392 QNTSLWTSLINMYAKCGAIAAAKQVFQGMKMKTLASYNVMISGLAMHGDAYEALELFRKM 451
Query: 453 ---EMEPDGAIWGSILGAC 500
M+PD + S+L AC
Sbjct: 452 TEESMKPDDITFVSVLSAC 470
Score = 85.9 bits (211), Expect = 3e-14
Identities = 52/140 (37%), Positives = 73/140 (52%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LIN YA G + A+ +F M + + SWNAMISG A G A+ LF EM V
Sbjct: 194 FTALINGYALKGRVGDARELFDEMPVRDVVSWNAMISGYAQVGRFEEALVLFEEMRNVNV 253
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
P T +SVLSAC G LG + S I D+ + ++ +ID+ A+ G + A
Sbjct: 254 EPSVSTLLSVLSACARVGELKLG-NWVRSWIEDHGLGLNIRLVNALIDMYAKCGDVKTAR 312
Query: 435 SLVERMEMEPDGAIWGSILG 494
L E +E E D W ++G
Sbjct: 313 MLFEGLE-EKDLVSWNVMIG 331
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Vitis vinifera]
Length = 738
Score = 555 bits (1431), Expect = e-156
Identities = 261/359 (72%), Positives = 307/359 (85%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLGKW+H YI+K + N +LWTSLI+MYAKCGNIEAAK +F M+ KSL SWNAMI
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMI 439
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
SGLAMHG AN A++LF +M E PD+ITFV VLSAC H+GL LGR+ F+SM+ DY+I
Sbjct: 440 SGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDI 499
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASE 542
P+LQHYGCMIDLL RAGLF+EA +L++ MEM+PDGAIWGS+LGACR++ N+EL E+A++
Sbjct: 500 SPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAK 559
Query: 543 KLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEFL 722
LF+LEP+NPGAY+LLSNIYA GRWD VARIRT LNDKG+KKVPG +SIEVD VVHEFL
Sbjct: 560 HLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFL 619
Query: 723 VSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAYG 902
V D+ H +S +IY+ML+E+D+LLE AGHV DTSEV YD+DEEWKEG L HSEKLAIA+G
Sbjct: 620 VGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFG 679
Query: 903 LISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
LISTKP TT+RIVKNLRVCGNCHSA KLISKIF+REIIARDR+RFHHFKDG CSCMDYW
Sbjct: 680 LISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
Score = 95.1 bits (235), Expect = 5e-17
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 2/191 (1%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+L+LG WV +IE H N L +LI+MY+KCG+++ A+ +F + K + SWN MI
Sbjct: 279 SLELGNWVRSWIEDHGLG-SNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMI 337
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
G + A+ LF +M + V P+++TFVS+L AC + G +LG+ + +
Sbjct: 338 GGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLG 397
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILG--ACRIYKNLELAEYA 536
+ +ID+ A+ G E A + M+ + G+ W +++ A + N+ L +
Sbjct: 398 LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS-WNAMISGLAMHGHANMALELFR 456
Query: 537 SEKLFKLEPDN 569
+ EPD+
Sbjct: 457 QMRDEGFEPDD 467
Score = 85.1 bits (209), Expect = 5e-14
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI Y G ++ A+ +F + + SWNAMI+G A G A+ F EM + V
Sbjct: 201 FTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANV 260
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAG------ 416
P+E T V+VLSAC SG LG + S I D+ + L+ +ID+ ++ G
Sbjct: 261 APNESTMVTVLSACAQSGSLELG-NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKAR 319
Query: 417 -LFE------------------------EAMSLVERME---MEPDGAIWGSILGACRIYK 512
LFE EA++L +M+ +EP+ + SIL AC
Sbjct: 320 DLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLG 379
Query: 513 NLELAEYASEKLFK--LEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGST 686
L+L ++ + K L N + L ++YA G + ++ + K + GS
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSL----GSW 435
Query: 687 SIEVDGV 707
+ + G+
Sbjct: 436 NAMISGL 442
>gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
Length = 714
Score = 546 bits (1408), Expect = e-153
Identities = 261/359 (72%), Positives = 305/359 (84%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLGKW+H YI+K++Q N +LWTSLI+MYAKCGNIEAAK +F M+ KSLASWNAMI
Sbjct: 356 ALDLGKWIHAYIDKNFQSLTNTSLWTSLIDMYAKCGNIEAAKQVFNGMEAKSLASWNAMI 415
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
SGLAMHG A+ A++LFS+MA E +PDEITFV VLSAC H GL +LGR++F+SMI DY+I
Sbjct: 416 SGLAMHGHAHTALELFSKMADEGFKPDEITFVGVLSACNHGGLVDLGRQYFSSMITDYHI 475
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASE 542
QLQHYGCMIDLL RAGLF+EA +L+ MEM+PDGA+WGS+LGACRI++ +EL E ++
Sbjct: 476 SAQLQHYGCMIDLLGRAGLFDEAEALMSSMEMKPDGAVWGSLLGACRIHRRVELGELVAK 535
Query: 543 KLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEFL 722
LF+LEP+N GAY+LLSNIYAG GRWD VARIRT LND GIKKVPG TSIE+D VVHEFL
Sbjct: 536 HLFELEPENAGAYVLLSNIYAGAGRWDDVARIRTRLNDLGIKKVPGCTSIEMDSVVHEFL 595
Query: 723 VSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAYG 902
VSD+ H S EIY+ML+E+DRLL+MAG DTSEV YD+DEEWKE L HSEKLAIA+G
Sbjct: 596 VSDKAHPLSKEIYEMLKEIDRLLDMAGFRPDTSEVLYDMDEEWKEVALSHHSEKLAIAFG 655
Query: 903 LISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
LISTKPGTT+RIVKNLRVC NCHSATKLISKIF+REIIARD +RFHHF+DG CSC D W
Sbjct: 656 LISTKPGTTIRIVKNLRVCANCHSATKLISKIFNREIIARDGNRFHHFRDGSCSCNDNW 714
Score = 94.0 bits (232), Expect = 1e-16
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+L+LGKWV +IE N L +LI+MYAKCG ++ A+ +F +Q + + SWN MI
Sbjct: 255 SLELGKWVGSWIENRGLG-SNLRLVNALIDMYAKCGALDTARSLFDGLQQRDVISWNVMI 313
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
G A+ LF M + P+++TF+ +L AC H G +LG+ + ++
Sbjct: 314 GGYTHKSHYKEALALFRLMLRSNADPNDVTFLGILPACSHLGALDLGKWIHAYIDKNFQS 373
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKN----LELAE 530
+ +ID+ A+ G E A + ME + A W +++ ++ + LEL
Sbjct: 374 LTNTSLWTSLIDMYAKCGNIEAAKQVFNGMEAK-SLASWNAMISGLAMHGHAHTALELFS 432
Query: 531 YASEKLFK 554
+++ FK
Sbjct: 433 KMADEGFK 440
Score = 92.8 bits (229), Expect = 2e-16
Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 6/166 (3%)
Frame = +3
Query: 15 GKWVHIYIEKHYQDFPNETLWTSLINMYAK------CGNIEAAKHIFYNMQTKSLASWNA 176
GK +H ++ K D + + TSLINMYA+ G ++ A+++F + + + SWNA
Sbjct: 152 GKQIHGHVLKLGLD-SDAFVHTSLINMYAQNVLSEMWGCMDDARYLFDEIPGRDVVSWNA 210
Query: 177 MISGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDY 356
MISG A G A+ LFSEM K V P+E T V VLSAC SG LG+ + S I +
Sbjct: 211 MISGYAQSGRFEEALALFSEMRKANVSPNESTMVVVLSACAQSGSLELGK-WVGSWIENR 269
Query: 357 NIFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILG 494
+ L+ +ID+ A+ G + A SL + ++ + D W ++G
Sbjct: 270 GLGSNLRLVNALIDMYAKCGALDTARSLFDGLQ-QRDVISWNVMIG 314
>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Citrus sinensis]
Length = 736
Score = 538 bits (1385), Expect = e-150
Identities = 253/359 (70%), Positives = 304/359 (84%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLGKW+H YI+K++Q N +LWTSLI+MYAKCGNI+AA+ +F M K+LASWNAMI
Sbjct: 378 ALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMI 437
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
SGLAMHG+A++A+ LFS M E ++PD+ITFV VLSAC H+GL ++GR++FN+MI DY I
Sbjct: 438 SGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKI 497
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASE 542
P+LQHYGCM+DLL RAGLF+EA +L++ MEM+PD AIW S+LGACR++ LEL E ++
Sbjct: 498 SPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAK 557
Query: 543 KLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEFL 722
L +LEP+NPGAY+LLSN+YAG GRWD VA IRT LNDKG+KKVPG +SIEV VVHEFL
Sbjct: 558 HLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFL 617
Query: 723 VSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAYG 902
V D+ H +S IY+ML+E+D LLE +G V DTSEV YD+DEEWKEG L HSEKLAIAYG
Sbjct: 618 VGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYG 677
Query: 903 LISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
LISTKPGTT+RIVKNLRVCGNCHSATKLISKIF+REIIARDR+RFHHFKDG CSC DYW
Sbjct: 678 LISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 736
Score = 83.2 bits (204), Expect = 2e-13
Identities = 47/140 (33%), Positives = 76/140 (54%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI YA G ++ A+ +F M + + SWNAMI+G A G A+ +F ++ +E
Sbjct: 199 YTALITGYASRGYLDDARQLFDEMPVRDVVSWNAMIAGYAQSGRYEEALAIFQKIREENF 258
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
P+E T V+VLSAC H G LG + S+I + + L +ID+ ++ G +A
Sbjct: 259 VPNESTVVTVLSACAHMGSLELG-NWVCSLIEGHGLGSNLHVTNALIDMYSKCGDLVKAR 317
Query: 435 SLVERMEMEPDGAIWGSILG 494
L E +E + D W ++G
Sbjct: 318 DLFESIE-KRDVISWNVMIG 336
>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
gi|557554208|gb|ESR64222.1| hypothetical protein
CICLE_v10010823mg [Citrus clementina]
Length = 736
Score = 538 bits (1385), Expect = e-150
Identities = 253/359 (70%), Positives = 304/359 (84%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLGKW+H YI+K++Q N +LWTSLI+MYAKCGNI+AA+ +F M K+LASWNAMI
Sbjct: 378 ALDLGKWIHAYIDKNHQKLNNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMI 437
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
SGLAMHG+A++A+ LFS M E ++PD+ITFV VLSAC H+GL ++GR++FN+MI DY I
Sbjct: 438 SGLAMHGKADKALSLFSRMIGEGLQPDDITFVGVLSACNHAGLLDIGRQYFNAMIQDYKI 497
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASE 542
P+LQHYGCM+DLL RAGLF+EA +L++ MEM+PD AIW S+LGACR++ LEL E ++
Sbjct: 498 SPKLQHYGCMVDLLGRAGLFDEAEALLKTMEMKPDAAIWTSLLGACRVHGRLELGESVAK 557
Query: 543 KLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEFL 722
L +LEP+NPGAY+LLSN+YAG GRWD VA IRT LNDKG+KKVPG +SIEV VVHEFL
Sbjct: 558 HLLELEPENPGAYVLLSNMYAGAGRWDDVATIRTRLNDKGMKKVPGCSSIEVGSVVHEFL 617
Query: 723 VSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAYG 902
V D+ H +S IY+ML+E+D LLE +G V DTSEV YD+DEEWKEG L HSEKLAIAYG
Sbjct: 618 VGDKVHPQSKHIYEMLDEIDALLEKSGFVPDTSEVLYDMDEEWKEGALSHHSEKLAIAYG 677
Query: 903 LISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
LISTKPGTT+RIVKNLRVCGNCHSATKLISKIF+REIIARDR+RFHHFKDG CSC DYW
Sbjct: 678 LISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGNCSCNDYW 736
Score = 83.2 bits (204), Expect = 2e-13
Identities = 47/140 (33%), Positives = 76/140 (54%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI YA G ++ A+ +F M + + SWNAMI+G A G A+ +F ++ +E
Sbjct: 199 YTALITGYASRGYLDDARQLFDEMPVRDVVSWNAMIAGYAQSGRYEEALAIFQKIREENF 258
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
P+E T V+VLSAC H G LG + S+I + + L +ID+ ++ G +A
Sbjct: 259 VPNESTVVTVLSACAHMGSLELG-NWVCSLIEGHGLGSNLHVTNALIDMYSKCGGLVKAR 317
Query: 435 SLVERMEMEPDGAIWGSILG 494
L E +E + D W ++G
Sbjct: 318 DLFESIE-KRDVISWNVMIG 336
>gb|EXB86239.1| hypothetical protein L484_005950 [Morus notabilis]
Length = 737
Score = 530 bits (1366), Expect = e-148
Identities = 249/359 (69%), Positives = 304/359 (84%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLGKW+H YI+K + F N +LWTSLI+MYAK GNI+AAK +F M+ +SLASWNAMI
Sbjct: 379 ALDLGKWIHAYIDKKFHTFTNNSLWTSLIDMYAKSGNIDAAKQVFDGMEIRSLASWNAMI 438
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
SGLA+HG A+ A +LFS+M E +PD+I+FV+VLSAC ++GL +GR++F+SM+ DYN+
Sbjct: 439 SGLAVHGHASLAFELFSKMTDEGFKPDDISFVAVLSACNYAGLLGIGRQYFSSMVQDYNV 498
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASE 542
P+LQHYG MIDLL RAGLF+EA SL++ MEM+PDGAIWGS+LGACR ++ +EL E+ +E
Sbjct: 499 SPKLQHYGIMIDLLGRAGLFDEAESLIKNMEMKPDGAIWGSLLGACRAHRRVELGEFVAE 558
Query: 543 KLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEFL 722
+L +LEP NPG Y+LLSNIYAG RWD VARIRT L+DKG+KKVPG TSIEVD VVHEFL
Sbjct: 559 RLSELEPGNPGPYVLLSNIYAGASRWDDVARIRTKLHDKGMKKVPGCTSIEVDNVVHEFL 618
Query: 723 VSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAYG 902
V D+ H S +IY+ML E+DRLL+++G V DTSEV YD+DE+ KEG L HSEKLAIA+G
Sbjct: 619 VGDKVHPLSEDIYKMLNEIDRLLDISGFVPDTSEVLYDMDEDLKEGSLSHHSEKLAIAFG 678
Query: 903 LISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
LISTKPGTT+RIVKNLRVCGNCHSATKLISKIF+REIIARDR+RFHHFK+G CSC DYW
Sbjct: 679 LISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKNGSCSCNDYW 737
Score = 90.5 bits (223), Expect = 1e-15
Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 3/204 (1%)
Frame = +3
Query: 6 LDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMIS 185
L+ G WV +I + + +L++MY+KCGN++ A+ +F ++ +++ SWN MI
Sbjct: 279 LESGNWVRSWIGDRGLG-SSLRIVNALVDMYSKCGNLDTARDLFDGLRERNVVSWNIMIG 337
Query: 186 GLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIF 365
G + A+ LF M + V P+++T ++VL AC H G +LG+ + ++ F
Sbjct: 338 GYTHMSDYKEALALFRLMLRSDVEPNDVTLLAVLPACAHLGALDLGKWIHAYIDKKFHTF 397
Query: 366 PQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASEK 545
+ +ID+ A++G + A + + ME+ A W +++ ++ + LA K
Sbjct: 398 TNNSLWTSLIDMYAKSGNIDAAKQVFDGMEIR-SLASWNAMISGLAVHGHASLAFELFSK 456
Query: 546 LFK--LEPDNPGAYILLSNI-YAG 608
+ +PD+ +LS YAG
Sbjct: 457 MTDEGFKPDDISFVAVLSACNYAG 480
Score = 83.2 bits (204), Expect = 2e-13
Identities = 47/144 (32%), Positives = 76/144 (52%)
Frame = +3
Query: 63 NETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMA 242
N +T+LI YA G +E A+ IF M T+ + +WNA+ISG + + A+ F EM
Sbjct: 196 NAVSFTALITGYALRGRMEEARGIFDEMPTRDVVAWNAIISGYTQSAQFDEALAFFKEMV 255
Query: 243 KEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLF 422
K V+P+E +FV +LSAC SG G + S I D + L+ ++D+ ++ G
Sbjct: 256 KANVKPNESSFVVILSACAQSGNLESG-NWVRSWIGDRGLGSSLRIVNALVDMYSKCGNL 314
Query: 423 EEAMSLVERMEMEPDGAIWGSILG 494
+ A L + + E + W ++G
Sbjct: 315 DTARDLFDGLR-ERNVVSWNIMIG 337
>gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 847
Score = 530 bits (1366), Expect = e-148
Identities = 250/351 (71%), Positives = 303/351 (86%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLGKW+H YI+K++Q+ N +LWTSLI+MYAKCG+IEAA+ +F M+ K+LASWNAMI
Sbjct: 436 ALDLGKWIHAYIDKNFQNSTNISLWTSLIDMYAKCGSIEAAQQVFNGMEQKNLASWNAMI 495
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
SGLAMHG A++A++LFS+M ++PD+ITFV VLSAC H+GL +LGR++F+SM+ +Y I
Sbjct: 496 SGLAMHGLADKALELFSQMMGGGLKPDDITFVGVLSACTHAGLLDLGRQYFSSMVQEYAI 555
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASE 542
P LQHYGCM++LL RAGLF+EA +L++ MEM+PDGAIWGS+LGACR++K +EL E ++
Sbjct: 556 SPDLQHYGCMVNLLGRAGLFDEAEALIQNMEMKPDGAIWGSLLGACRVHKRVELGESVAQ 615
Query: 543 KLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEFL 722
+L +LEPDNPGAY+LLSNIYAG GRWD VARIRT LN+KG+KKVPG +SIEVD VVHEFL
Sbjct: 616 RLLELEPDNPGAYVLLSNIYAGAGRWDDVARIRTLLNNKGMKKVPGCSSIEVDSVVHEFL 675
Query: 723 VSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAYG 902
VSD+ H + EIY ML EVD LLE AG V DTSEV D+DEEWKEG L HSEKLAIA+G
Sbjct: 676 VSDKVHPRCKEIYDMLNEVDTLLEKAGFVPDTSEVIRDMDEEWKEGALSHHSEKLAIAFG 735
Query: 903 LISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDG 1055
LISTKPGTT+RIVKNLRVCGNCHSATKLISKIF+REIIARDR+RFHHFKDG
Sbjct: 736 LISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDG 786
Score = 93.6 bits (231), Expect = 1e-16
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 4/178 (2%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+L+LG WV +I +H N L +LI+MY+KCG+++ A +F +Q + + SWN MI
Sbjct: 335 SLELGTWVRSWINEHGLG-SNIHLANALIDMYSKCGDLDTAFDLFEGLQQRDVISWNVMI 393
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
G A+ LF M + + P ++TF+SVL AC + G +LG+ + ++
Sbjct: 394 GGYTHMSYYKEALGLFRRMLRSNIEPSDVTFLSVLPACANLGALDLGKWIHAYIDKNFQN 453
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIY----KNLEL 524
+ + +ID+ A+ G E A + ME + + A W +++ ++ K LEL
Sbjct: 454 STNISLWTSLIDMYAKCGSIEAAQQVFNGME-QKNLASWNAMISGLAMHGLADKALEL 510
Score = 83.6 bits (205), Expect = 1e-13
Identities = 49/155 (31%), Positives = 82/155 (52%)
Frame = +3
Query: 30 IYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEA 209
++ + H +D + +T+LI Y G +E A+ +F + + + SWNAMI+G A G+
Sbjct: 245 VFDKSHLRDTVS---YTALITGYVSIGYMENARKLFDEIPIRDVVSWNAMIAGYAQTGQH 301
Query: 210 NRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGC 389
A+ F EM V P+E T VSVLSAC SG LG + S I+++ + +
Sbjct: 302 EEALAFFEEMIGANVVPNESTLVSVLSACAQSGSLELG-TWVRSWINEHGLGSNIHLANA 360
Query: 390 MIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILG 494
+ID+ ++ G + A L E ++ + D W ++G
Sbjct: 361 LIDMYSKCGDLDTAFDLFEGLQ-QRDVISWNVMIG 394
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Cucumis sativus] gi|449529868|ref|XP_004171920.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 526 bits (1355), Expect = e-147
Identities = 248/359 (69%), Positives = 303/359 (84%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
A+DLGKW+H YI K++ + +L TSLI++YAKCGNI AA+ +F M+ KSLASWNAMI
Sbjct: 377 AIDLGKWIHAYINKNFNSV-STSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMI 435
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
GLAMHG+A++A +LFS+M+ + + P+EITFV +LSAC H+GL +LG++FF+SM+ DY I
Sbjct: 436 CGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKI 495
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASE 542
P+ QHYGCMIDLL RAGLFEEA SL++ ME++PDGAIWGS+LGACR + +EL E +E
Sbjct: 496 SPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAE 555
Query: 543 KLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEFL 722
+LF+LEPDNPGAY+LLSNIYAG G+WD VARIRT LND+G+KKVPG T+IEVD VVHEFL
Sbjct: 556 RLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFL 615
Query: 723 VSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAYG 902
V D+ H +S +IY+MLEEVD L++ G V DTSEV YD+DEEWKEG L HSEKLAIA+G
Sbjct: 616 VGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFG 675
Query: 903 LISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
LISTKPGT +RI+KNLRVC NCHSATKLISKIF+REIIARDR+RFHHFKDG CSC DYW
Sbjct: 676 LISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734
Score = 90.5 bits (223), Expect = 1e-15
Identities = 53/147 (36%), Positives = 79/147 (53%)
Frame = +3
Query: 54 DFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFS 233
+F + +T+LI YA G ++ A+ +F M K + SWNAMI+G A G + A+ LF
Sbjct: 191 NFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFE 250
Query: 234 EMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARA 413
+M K V P+E T VSVLSAC S +LG S I D + L+ +ID+ ++
Sbjct: 251 DMRKANVPPNESTIVSVLSACAQSNALDLGNS-MRSWIEDRGLCSNLKLVNALIDMYSKC 309
Query: 414 GLFEEAMSLVERMEMEPDGAIWGSILG 494
G + A L + M +E D W ++G
Sbjct: 310 GDLQTARELFDDM-LERDVISWNVMIG 335
Score = 84.0 bits (206), Expect = 1e-13
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 33/200 (16%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLG + +IE N L +LI+MY+KCG+++ A+ +F +M + + SWN MI
Sbjct: 276 ALDLGNSMRSWIEDRGL-CSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMI 334
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGR-------EFFNS 341
G A+ LF EM V P EITF+S+L +C H G +LG+ + FNS
Sbjct: 335 GGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNS 394
Query: 342 M-----------------------IHDYNIFPQLQHYGCMIDLLARAGLFEEAMSLVERM 452
+ + D L + MI LA G ++A L +M
Sbjct: 395 VSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKM 454
Query: 453 E---MEPDGAIWGSILGACR 503
+EP+ + IL AC+
Sbjct: 455 SSDGIEPNEITFVGILSACK 474
>ref|XP_004508527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Cicer arietinum]
Length = 737
Score = 525 bits (1351), Expect = e-146
Identities = 247/359 (68%), Positives = 301/359 (83%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLGKWV+ YI+K+ + N +LWTSLI+MYAKCG IEAA+ +F +M + SL++WNAM+
Sbjct: 379 ALDLGKWVYAYIDKNLKSSSNASLWTSLIDMYAKCGCIEAAEWVFRSMNSSSLSAWNAML 438
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
SGLAMHG A +A+ LFSEM + +PD+ITFV +LSAC +GL +LG+ +F SM+ DY I
Sbjct: 439 SGLAMHGHAEKALALFSEMVDKGFQPDDITFVGILSACTQAGLVDLGQNYFRSMMQDYGI 498
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASE 542
P+LQHYGCMIDLLARAG FEEA L++ MEMEPDGAIWGS+L AC+ + +EL EY +E
Sbjct: 499 CPKLQHYGCMIDLLARAGKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVELGEYVAE 558
Query: 543 KLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEFL 722
+LF+LEP+N GA++LLSNIYAG G+WD+VARIRT LNDKG+KKVPG TSIE+DGVVHEFL
Sbjct: 559 RLFQLEPENAGAFVLLSNIYAGAGKWDEVARIRTRLNDKGMKKVPGCTSIEIDGVVHEFL 618
Query: 723 VSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAYG 902
V D+ H + IY ML+E+D+LLE G V DTSEV YD+DEEWKEG L +HSEKLAIA+G
Sbjct: 619 VGDKFHPECKNIYSMLDEIDKLLEENGFVPDTSEVLYDMDEEWKEGALSQHSEKLAIAFG 678
Query: 903 LISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
LISTKPG+T+RIVKNLRVCGNCHSATKLISKIF+R+IIARDR+RFHHFKDG CSC D W
Sbjct: 679 LISTKPGSTIRIVKNLRVCGNCHSATKLISKIFNRQIIARDRNRFHHFKDGFCSCNDCW 737
Score = 87.0 bits (214), Expect = 1e-14
Identities = 52/154 (33%), Positives = 78/154 (50%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI Y G ++ A+ +F + TK L SWNAMI+G AI+ F EM K +
Sbjct: 200 FTALITGYVSQGYVDDARRLFDEIPTKDLVSWNAMIAGYVQSCRFEEAIECFCEMQKTNI 259
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
P + T V++LSAC H+G LG + S + D LQ ++D+ ++ G + A
Sbjct: 260 SPSKSTMVTLLSACGHTGSRELG-NWIGSWVRDNGFGSNLQMTNALVDMYSKCGEIDTAR 318
Query: 435 SLVERMEMEPDGAIWGSILGACRIYKNLELAEYA 536
L + ME E D W +++ Y L L E A
Sbjct: 319 QLFDGME-EKDVISWNTMISG---YSYLSLYEEA 348
Score = 87.0 bits (214), Expect = 1e-14
Identities = 49/173 (28%), Positives = 87/173 (50%)
Frame = +3
Query: 9 DLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISG 188
+LG W+ ++ + N + +L++MY+KCG I+ A+ +F M+ K + SWN MISG
Sbjct: 280 ELGNWIGSWVRDNGFG-SNLQMTNALVDMYSKCGEIDTARQLFDGMEEKDVISWNTMISG 338
Query: 189 LAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFP 368
+ A+ LF M + V+P++ITF+ +L AC G +LG+ + + +
Sbjct: 339 YSYLSLYEEALALFDVMLRSNVKPNDITFLGILPACACLGALDLGKWVYAYIDKNLKSSS 398
Query: 369 QLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELA 527
+ +ID+ A+ G E A + M A W ++L ++ + E A
Sbjct: 399 NASLWTSLIDMYAKCGCIEAAEWVFRSMNSSSLSA-WNAMLSGLAMHGHAEKA 450
>ref|XP_002324235.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317719|gb|EEF02800.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 736
Score = 523 bits (1348), Expect = e-146
Identities = 251/360 (69%), Positives = 297/360 (82%), Gaps = 1/360 (0%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNET-LWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAM 179
ALDLGKWVH Y++K+ + N LWTSLI+MYAKCG++ AAK IF M TKSLA+WNAM
Sbjct: 377 ALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAAAKRIFDCMNTKSLATWNAM 436
Query: 180 ISGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYN 359
ISG AMHG + A+ LFS M E PD+ITFV VL+AC H+GL +LGR +F+SMI DY
Sbjct: 437 ISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYK 496
Query: 360 IFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYAS 539
+ P+L HYGCMIDL RAGLF+EA +LV+ MEM+PDGAIW S+LGACRI++ +ELAE +
Sbjct: 497 VSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVA 556
Query: 540 EKLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEF 719
+ LF+LEP+NP AY+LLSNIYAG GRW+ VA+IRT LND +KKVPG +SIEVD VVHEF
Sbjct: 557 KHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEF 616
Query: 720 LVSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAY 899
LV D+ H +S EIY+ML+E+D LE AG V DTSEV YD+DEEWKEGVL HSEKLAIA+
Sbjct: 617 LVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAF 676
Query: 900 GLISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
GLISTKPGTT+RI+KNLRVCGNCHSATKLISKIF+REIIARDR+RFHHFKDG CSC DYW
Sbjct: 677 GLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736
Score = 85.1 bits (209), Expect = 5e-14
Identities = 47/140 (33%), Positives = 76/140 (54%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI YA G ++ A+ +F + + + SWNAMISG A G A+ F EM + KV
Sbjct: 197 FTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKV 256
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
P+ T +SVLSAC SG + + S I D + ++ +ID+ + G EEA
Sbjct: 257 TPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEAS 316
Query: 435 SLVERMEMEPDGAIWGSILG 494
+L E+++ + + W ++G
Sbjct: 317 NLFEKIQ-DKNVVSWNVMIG 335
Score = 85.1 bits (209), Expect = 5e-14
Identities = 71/246 (28%), Positives = 109/246 (44%), Gaps = 38/246 (15%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+L LG WV +IE N L LI+MY KCG++E A ++F +Q K++ SWN MI
Sbjct: 276 SLQLGNWVRSWIEDRGLG-SNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMI 334
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGR------------ 326
G A+ LF M + + P+++TF+S+L AC + G +LG+
Sbjct: 335 GGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKS 394
Query: 327 -----EFFNSMIHDY----------NIF-----PQLQHYGCMIDLLARAGLFEEAMSLVE 446
+ S+I Y IF L + MI A G + A+ L
Sbjct: 395 MKNTVALWTSLIDMYAKCGDLAAAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFS 454
Query: 447 RMEME---PDGAIWGSILGACRIYKNLELA-EYASEKL--FKLEPDNPGAYILLSNIYAG 608
RM E PD + +L AC+ L L Y S + +K+ P P Y + +++
Sbjct: 455 RMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLP-HYGCMIDLFGR 513
Query: 609 FGRWDK 626
G +D+
Sbjct: 514 AGLFDE 519
>gb|ESW26970.1| hypothetical protein PHAVU_003G162300g [Phaseolus vulgaris]
Length = 733
Score = 522 bits (1344), Expect = e-145
Identities = 250/359 (69%), Positives = 298/359 (83%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLGKWVH Y++K + N +LWTS+I+MYAKCG +EAA+ +F + ++SLAS NAMI
Sbjct: 375 ALDLGKWVHAYVDKILKGTDNASLWTSIIDMYAKCGCVEAAEQVFRSNGSRSLASRNAMI 434
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNI 362
SG AM+G A RA+ LF EM KE +PD+ITFV VLSAC +GL +LG +F+SM D+ I
Sbjct: 435 SGFAMNGHAERALALFEEMIKEGFQPDDITFVGVLSACTQAGLVDLGHRYFSSMNQDFGI 494
Query: 363 FPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYASE 542
P+LQHYGCMIDLLAR G FEEA ++ M+MEPDGAIWGS+L ACRI+ +E EY +E
Sbjct: 495 SPKLQHYGCMIDLLARGGKFEEAKVMMGNMQMEPDGAIWGSLLNACRIHGQVEFGEYVAE 554
Query: 543 KLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEFL 722
+LF+LEP+N GAY+LLSNIYAG GRWD VARIRT LNDKG+KKVPG TSIE+DG+VHEFL
Sbjct: 555 QLFQLEPENSGAYVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGIVHEFL 614
Query: 723 VSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAYG 902
V D+ HS+S IY+ML+EVD+LLE +G V DTSEV YD+DEEWKEG L +HSEKLAIA+G
Sbjct: 615 VGDKLHSQSEYIYRMLDEVDKLLEESGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFG 674
Query: 903 LISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
LISTKPGTT+RIVKNLRVCGNCHSATKLISKIF+REIIARDR+RFHHFKDG CSC D W
Sbjct: 675 LISTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 733
Score = 86.7 bits (213), Expect = 2e-14
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 34/200 (17%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+L+LGKW+ ++ H N L +L++MY KCG I+ A+ +F ++ K L SWN MI
Sbjct: 274 SLELGKWIGSWVRDHGLG-SNIQLVNALVDMYCKCGEIDTARELFDGIREKDLISWNTMI 332
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGR------------ 326
G + A+ LF M +EKV P+++TF+ VL AC G +LG+
Sbjct: 333 GGYSYLSLYAEALALFDLMLREKVTPNDVTFLGVLPACACLGALDLGKWVHAYVDKILKG 392
Query: 327 ----EFFNSMIHDY---------------NIFPQLQHYGCMIDLLARAGLFEEAMSLVER 449
+ S+I Y N L MI A G E A++L E
Sbjct: 393 TDNASLWTSIIDMYAKCGCVEAAEQVFRSNGSRSLASRNAMISGFAMNGHAERALALFEE 452
Query: 450 MEME---PDGAIWGSILGAC 500
M E PD + +L AC
Sbjct: 453 MIKEGFQPDDITFVGVLSAC 472
Score = 84.7 bits (208), Expect = 6e-14
Identities = 45/140 (32%), Positives = 75/140 (53%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI Y G+++ A+ +F + K + SWNAMI+G G A+ FS M + V
Sbjct: 196 FTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQGGRFEEALACFSSMQEADV 255
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
P++ T VSVLSAC H G LG+ + S + D+ + +Q ++D+ + G + A
Sbjct: 256 SPNKSTMVSVLSACGHLGSLELGK-WIGSWVRDHGLGSNIQLVNALVDMYCKCGEIDTAR 314
Query: 435 SLVERMEMEPDGAIWGSILG 494
L + + E D W +++G
Sbjct: 315 ELFDGIR-EKDLISWNTMIG 333
>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 738
Score = 520 bits (1340), Expect = e-145
Identities = 250/360 (69%), Positives = 298/360 (82%), Gaps = 1/360 (0%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
ALDLGKWVH YI+K+ ++ N +LWTSLI+MYAKCG IEAA+ +F +M +++LASWNAM+
Sbjct: 379 ALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAML 438
Query: 183 SGLAMHGEANRAIQLFSEMAKEKV-RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYN 359
SG AMHG A RA+ LFSEM + + RPD+ITFV VLSAC +GL +LG ++F SMI DY
Sbjct: 439 SGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYG 498
Query: 360 IFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYAS 539
I P+LQHYGCMIDLLARA FEEA L++ MEMEPDGAIWGS+L AC+ + +E EY +
Sbjct: 499 ISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVA 558
Query: 540 EKLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEF 719
E+LF+LEP+N GA++LLSNIYAG GRWD VARIRT LNDKG+KKVPG TSIE+DG VHEF
Sbjct: 559 ERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEF 618
Query: 720 LVSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAY 899
LV D+ H + IY+ML EVD+LLE G V +TSEV YD+DEEWKEG L +HSEKLAI++
Sbjct: 619 LVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISF 678
Query: 900 GLISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
GLI TKPGTT+RIVKNLRVCGNCHSATKLISKIF+REIIARDR+RFHHFKDG CSC D W
Sbjct: 679 GLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 82.8 bits (203), Expect = 2e-13
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 5/192 (2%)
Frame = +3
Query: 9 DLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISG 188
+LGKW+ ++ + N L +LI+MY KCG + A+ +F ++ K + SWN MI G
Sbjct: 280 ELGKWIGSWVRDNGFG-SNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGG 338
Query: 189 LAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFP 368
+ A+ LF M + V+P+++TF+ +L AC G +LG+ + +
Sbjct: 339 YSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSS 398
Query: 369 QLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELA-----EY 533
+ +ID+ A+ G E A + M + A W ++L ++ + E A E
Sbjct: 399 NASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAMHGHAERALALFSEM 457
Query: 534 ASEKLFKLEPDN 569
++ LF+ PD+
Sbjct: 458 VNKGLFR--PDD 467
Score = 81.6 bits (200), Expect = 5e-13
Identities = 53/154 (34%), Positives = 77/154 (50%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI Y G ++ A+ +F + K + SWNAMISG G AI F EM + V
Sbjct: 200 FTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANV 259
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
P++ T V VLSAC H+ LG+ + S + D LQ +ID+ + G + A
Sbjct: 260 LPNKSTMVVVLSACGHTRSGELGK-WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIAR 318
Query: 435 SLVERMEMEPDGAIWGSILGACRIYKNLELAEYA 536
L + +E E D W +++G Y L L E A
Sbjct: 319 ELFDGIE-EKDVISWNTMIGG---YSYLSLYEEA 348
>ref|XP_003525660.2| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Glycine max]
Length = 737
Score = 516 bits (1329), Expect = e-144
Identities = 250/362 (69%), Positives = 296/362 (81%), Gaps = 3/362 (0%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQ---DFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWN 173
ALDLGKWVH YI+K+ + + N +LWTS+I MYAKCG +E A+ +F +M ++SLASWN
Sbjct: 376 ALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWN 435
Query: 174 AMISGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHD 353
AMISGLAM+G A RA+ LF EM E +PD+ITFV VLSAC +G LG +F+SM D
Sbjct: 436 AMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKD 495
Query: 354 YNIFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEY 533
Y I P+LQHYGCMIDLLAR+G F+EA L+ MEMEPDGAIWGS+L ACRI+ +E EY
Sbjct: 496 YGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEY 555
Query: 534 ASEKLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVH 713
+E+LF+LEP+N GAY+LLSNIYAG GRWD VA+IRT LNDKG+KKVPG TSIE+DGVVH
Sbjct: 556 VAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVH 615
Query: 714 EFLVSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAI 893
EFLV D+ H +S I++ML+EVDRLLE G V DTSEV YD+DEEWKEG L +HSEKLAI
Sbjct: 616 EFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAI 675
Query: 894 AYGLISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMD 1073
A+GLISTKPG+T+RIVKNLRVC NCHSATKLISKIF+REIIARDR+RFHHFKDG CSC D
Sbjct: 676 AFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCND 735
Query: 1074 YW 1079
W
Sbjct: 736 RW 737
Score = 84.3 bits (207), Expect = 8e-14
Identities = 50/154 (32%), Positives = 80/154 (51%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI Y G+++ A+ +F + K + SWNAMI+G G A+ F+ M + V
Sbjct: 197 FTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADV 256
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
P++ T VSVLSAC H LG+ + S + D LQ ++D+ ++ G A
Sbjct: 257 SPNQSTMVSVLSACGHLRSLELGK-WIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTAR 315
Query: 435 SLVERMEMEPDGAIWGSILGACRIYKNLELAEYA 536
L + ME + D +W +++G Y +L L E A
Sbjct: 316 KLFDGME-DKDVILWNTMIGG---YCHLSLYEEA 345
Score = 79.7 bits (195), Expect = 2e-12
Identities = 72/275 (26%), Positives = 115/275 (41%), Gaps = 39/275 (14%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+L+LGKW+ ++ N L +L++MY+KCG I A+ +F M+ K + WN MI
Sbjct: 275 SLELGKWIGSWVRDRGFG-KNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMI 333
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGR------------ 326
G A+ LF M +E V P+++TF++VL AC G +LG+
Sbjct: 334 GGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKG 393
Query: 327 -------EFFNSMIHDY----------NIF-----PQLQHYGCMIDLLARAGLFEEAMSL 440
+ S+I Y +F L + MI LA G E A+ L
Sbjct: 394 TGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGL 453
Query: 441 VERM---EMEPDGAIWGSILGACRIYKNLELAEYASEKLFKLEPDNPGA--YILLSNIYA 605
E M +PD + +L AC +EL + K +P Y + ++ A
Sbjct: 454 FEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLA 513
Query: 606 GFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVV 710
G++D+ K + G+ +E DG +
Sbjct: 514 RSGKFDEA------------KVLMGNMEMEPDGAI 536
>gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 483 bits (1244), Expect = e-134
Identities = 230/360 (63%), Positives = 282/360 (78%), Gaps = 1/360 (0%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPN-ETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAM 179
A+D+G+W+H+YI+K + N L TSLI+MYAKCG+IEAA +F +M KSL+SWNAM
Sbjct: 332 AIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAM 391
Query: 180 ISGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYN 359
I G AMHG AN A LFS M K + PD+IT V +LSAC HSGL +LGR F S+ DYN
Sbjct: 392 IFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYN 451
Query: 360 IFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYAS 539
I P+L+HYGCMIDLL AGLF+EA ++ M MEPDG IW S+L AC+++ NLELAE +
Sbjct: 452 ITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFA 511
Query: 540 EKLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEF 719
+KL ++EP+N G+Y+LLSNIYA GRW+ VARIR LN KG+KKVPG +SIE+D VVHEF
Sbjct: 512 QKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEF 571
Query: 720 LVSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAY 899
++ D+ H +S EIY+MLEE+D LLE AG V DTSEV +++EEWKEG L HSEKLAIA+
Sbjct: 572 IIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 631
Query: 900 GLISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
GLISTKPGT L +VKNLRVC NCH ATKLISKI+ REI+ARDR+RFHHF+DG CSC DYW
Sbjct: 632 GLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691
Score = 89.0 bits (219), Expect = 3e-15
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 5/210 (2%)
Frame = +3
Query: 78 TSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKVR 257
T+LI YA G++ +A+ +F + + + SWNAMI+G + A++LF EM + VR
Sbjct: 153 TALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVR 212
Query: 258 PDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIF-PQLQHYGCMIDLLARAGLFEEAM 434
PDE T VSVLSAC SG LGRE ++++ D++ F L+ I L ++ G E A
Sbjct: 213 PDEGTLVSVLSACAQSGSIELGRE-IHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIAS 271
Query: 435 SLVERMEMEPDGAIWGSILGACRIYKNLELAEYA----SEKLFKLEPDNPGAYILLSNIY 602
L E + + D W +++G Y ++ L + A E L E N + +
Sbjct: 272 GLFEGLSCK-DVVSWNTLIGG---YTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPAC 327
Query: 603 AGFGRWDKVARIRTFLNDKGIKKVPGSTSI 692
A G D I ++ DK +K V +++
Sbjct: 328 AHLGAIDIGRWIHVYI-DKRLKGVTNGSAL 356
Score = 82.0 bits (201), Expect = 4e-13
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+++LG+ +H ++ H+ + + + I +Y+KCG++E A +F + K + SWN +I
Sbjct: 230 SIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLI 289
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGR------------ 326
G A+ LF EM + P+++T +SVL AC H G ++GR
Sbjct: 290 GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKG 349
Query: 327 -------------------------EFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEA 431
+ FNSM+H L + MI A G A
Sbjct: 350 VTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMH-----KSLSSWNAMIFGFAMHGRANAA 404
Query: 432 MSLVERME---MEPDGAIWGSILGACRIYKNLELAEY 533
L RM +EPD +L AC L+L +
Sbjct: 405 FDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRH 441
>gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 481 bits (1238), Expect = e-133
Identities = 230/360 (63%), Positives = 281/360 (78%), Gaps = 1/360 (0%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNET-LWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAM 179
A+D+G+W+H+YI+K + NET L TSLI+MYAKCG+IEAA +F +M +SL+SWNAM
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAM 375
Query: 180 ISGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYN 359
I G AMHG AN A LFS M +V PD+ITFV +LSAC HSGL +LGR+ F SM DYN
Sbjct: 376 IFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYN 435
Query: 360 IFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYAS 539
+ P+L+HYGCMIDLL +GLF+EA ++ M MEPDG IW S+L AC+ + NLELAE +
Sbjct: 436 LTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFA 495
Query: 540 EKLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEF 719
+KL K+EP+N G+Y+LLSNIYA GRW+ VAR+R LN KG+KKVPG +SIEVD VVHEF
Sbjct: 496 QKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEF 555
Query: 720 LVSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAY 899
++ D+ H + EIY MLEE+D LE AG DTSEV +++EEWKEG L HSEKLAIA+
Sbjct: 556 IIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 615
Query: 900 GLISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
GLISTKPGT L IVKNLRVC NCH ATKLISKI+ REI+ARDR+RFHHF+DG CSC DYW
Sbjct: 616 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675
Score = 93.2 bits (230), Expect = 2e-16
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 6/211 (2%)
Frame = +3
Query: 78 TSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKVR 257
T+LI YA G+ +A+ +F + + + SWNAMI+G +G A++LF EM + VR
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193
Query: 258 PDEITFVSVLSACCHSGLANLGRE---FFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEE 428
PDE T VSV+SAC SG LGR+ + + D+ L+ +IDL ++ G E
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253
Query: 429 AMSLVERMEMEPDGAIWGSILGA---CRIYKNLELAEYASEKLFKLEPDNPGAYILLSNI 599
A L E + + D W +++G +YK E E L E N + +
Sbjct: 254 AFGLFEGLSCK-DVVSWNTLIGGYTHTNLYK--EALLLFQEMLRSGECPNDVTLLSVLPA 310
Query: 600 YAGFGRWDKVARIRTFLNDKGIKKVPGSTSI 692
A G D I ++ DK +K V TS+
Sbjct: 311 CAHLGAIDIGRWIHVYI-DKKLKGVTNETSL 340
>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya wallichii]
Length = 710
Score = 479 bits (1232), Expect = e-132
Identities = 225/360 (62%), Positives = 283/360 (78%), Gaps = 1/360 (0%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLW-TSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAM 179
A+++G+W+H+YI K + N + TSLI+MYAKCG+IEAA+ +F ++ +SL+SWNAM
Sbjct: 351 AIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAM 410
Query: 180 ISGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYN 359
I G AMHG AN A +FS M K ++ PD+ITFV +LSAC HSG+ +LGR F SM DY
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYK 470
Query: 360 IFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYAS 539
I P+L+HYGCMIDLL +GLF+EA ++ MEMEPDG IW S+L AC++Y N+EL E +
Sbjct: 471 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYA 530
Query: 540 EKLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEF 719
+ L K+EP NPG+Y+LLSNIYA GRW++VA+IR LNDKG+KKVPG +SIE+D VVHEF
Sbjct: 531 QNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEF 590
Query: 720 LVSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAY 899
++ D+ H ++ EIY MLEE++ LLE AG V DTSEV +++EEWKEG L HSEKLAIA+
Sbjct: 591 IIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 650
Query: 900 GLISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
GLISTKPGT L IVKNLRVC NCH ATKLISKI+ REIIARDR+RFHHF+DG CSC DYW
Sbjct: 651 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
Score = 97.4 bits (241), Expect = 9e-18
Identities = 72/209 (34%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI YA G I +A+ +F + K + SWNAMISG A G A++LF EM K V
Sbjct: 172 YTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNV 231
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
RPDE T VSV+SAC S LGR+ +S I D+ L+ +IDL + G E A
Sbjct: 232 RPDESTMVSVVSACAQSASIELGRQ-VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 290
Query: 435 SLVERMEMEPDGAIWGSILGACRIYKNLELAEYA----SEKLFKLEPDNPGAYILLSNIY 602
L E + + D W +++G Y ++ L + A E L E N + +
Sbjct: 291 GLFEGLSYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPAC 346
Query: 603 AGFGRWDKVARIRTFLNDKGIKKVPGSTS 689
A G + I ++N K +K V ++S
Sbjct: 347 AHLGAIEIGRWIHVYIN-KRLKGVANASS 374
Score = 80.5 bits (197), Expect = 1e-12
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+++LG+ VH +I+ H N + +LI++Y KCG +E A +F + K + SWN +I
Sbjct: 250 SIELGRQVHSWIDDHGFG-SNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLI 308
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDY-- 356
G A+ LF EM + P+++T +S+L AC H G +GR IH Y
Sbjct: 309 GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGR-----WIHVYIN 363
Query: 357 ----NIFPQLQHYGCMIDLLARAGLFEEAMSLVE 446
+ H +ID+ A+ G E A + +
Sbjct: 364 KRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD 397
>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 477 bits (1228), Expect = e-132
Identities = 227/360 (63%), Positives = 280/360 (77%), Gaps = 1/360 (0%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNE-TLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAM 179
A+D+G+W+H+YI+K +D N +L TSLI+MYAKCG+IEAA +F +M KSL+SWNAM
Sbjct: 314 AIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAM 373
Query: 180 ISGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYN 359
I G AMHG AN LFS M K + PD+ITFV +LSAC HSG +LGR F SM DY+
Sbjct: 374 IFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYD 433
Query: 360 IFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYAS 539
I P+L+HYGCMIDLL +GLF+EA +++ M MEPDG IW S+L ACR + NLELAE +
Sbjct: 434 ITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFA 493
Query: 540 EKLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEF 719
L K+EP+NPG+Y+LLSNIYA G WD+VA++R LN KG+KKVPG +SIE+D VHEF
Sbjct: 494 RNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEF 553
Query: 720 LVSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAY 899
+V D+ H ++ EIY MLEE++ LLE AG V DTSEV +++EEWKEG L HSEKLAIA+
Sbjct: 554 IVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 613
Query: 900 GLISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
GLISTKPGT L IVKNLRVC NCH ATKL+SKI+ REIIARDR+RFHHF+DG CSC D+W
Sbjct: 614 GLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673
Score = 105 bits (261), Expect = 4e-20
Identities = 74/210 (35%), Positives = 106/210 (50%), Gaps = 4/210 (1%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI YA GNI +A+ +F + K + SWNAMISG A G A++LF EM K V
Sbjct: 135 YTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNV 194
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
RPDE T V+VLSAC S LGR+ +S I D+ L+ +IDL ++ G E A
Sbjct: 195 RPDEGTMVTVLSACAQSRSVELGRQ-VHSWIDDHGFGSNLKIVNALIDLYSKCGQVETAC 253
Query: 435 SLVERMEMEPDGAIWGSILGACRIYKNLELAEYA----SEKLFKLEPDNPGAYILLSNIY 602
L E + + D W +++G Y ++ L + A E L E N + +
Sbjct: 254 GLFEGLSCK-DVVSWNTLIGG---YTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPAC 309
Query: 603 AGFGRWDKVARIRTFLNDKGIKKVPGSTSI 692
A G D I ++ DK +K V + S+
Sbjct: 310 AHLGAIDIGRWIHVYI-DKKLKDVTNAPSL 338
Score = 84.3 bits (207), Expect = 8e-14
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+++LG+ VH +I+ H N + +LI++Y+KCG +E A +F + K + SWN +I
Sbjct: 213 SVELGRQVHSWIDDHGFG-SNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLI 271
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGR---EFFNSMIHD 353
G A+ LF EM + P+++T VS+L AC H G ++GR + + + D
Sbjct: 272 GGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKD 331
Query: 354 YNIFPQLQHYGCMIDLLARAGLFEEAMSLVERM 452
P L+ +ID+ A+ G E A + M
Sbjct: 332 VTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSM 362
>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
[Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
chloroplast RNA editing factor [Arabidopsis thaliana]
Length = 741
Score = 477 bits (1227), Expect = e-132
Identities = 224/360 (62%), Positives = 284/360 (78%), Gaps = 1/360 (0%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPN-ETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAM 179
A+D+G+W+H+YI+K + N +L TSLI+MYAKCG+IEAA +F ++ KSL+SWNAM
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 441
Query: 180 ISGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYN 359
I G AMHG A+ + LFS M K ++PD+ITFV +LSAC HSG+ +LGR F +M DY
Sbjct: 442 IFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYK 501
Query: 360 IFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYAS 539
+ P+L+HYGCMIDLL +GLF+EA ++ MEMEPDG IW S+L AC+++ N+EL E +
Sbjct: 502 MTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFA 561
Query: 540 EKLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEF 719
E L K+EP+NPG+Y+LLSNIYA GRW++VA+ R LNDKG+KKVPG +SIE+D VVHEF
Sbjct: 562 ENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEF 621
Query: 720 LVSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAY 899
++ D+ H ++ EIY MLEE++ LLE AG V DTSEV +++EEWKEG L HSEKLAIA+
Sbjct: 622 IIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 681
Query: 900 GLISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
GLISTKPGT L IVKNLRVC NCH ATKLISKI+ REIIARDR+RFHHF+DG CSC DYW
Sbjct: 682 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 102 bits (255), Expect = 2e-19
Identities = 73/210 (34%), Positives = 107/210 (50%), Gaps = 4/210 (1%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI YA G IE A+ +F + K + SWNAMISG A G A++LF +M K V
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
RPDE T V+V+SAC SG LGR+ + I D+ L+ +IDL ++ G E A
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQ-VHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 321
Query: 435 SLVERMEMEPDGAIWGSILGACRIYKNLELAEYA----SEKLFKLEPDNPGAYILLSNIY 602
L ER+ + D W +++G Y ++ L + A E L E N + +
Sbjct: 322 GLFERLPYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377
Query: 603 AGFGRWDKVARIRTFLNDKGIKKVPGSTSI 692
A G D I ++ DK +K V ++S+
Sbjct: 378 AHLGAIDIGRWIHVYI-DKRLKGVTNASSL 406
Score = 80.1 bits (196), Expect = 2e-12
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 40/217 (18%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+++LG+ VH++I+ H N + +LI++Y+KCG +E A +F + K + SWN +I
Sbjct: 281 SIELGRQVHLWIDDHGFG-SNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGR------------ 326
G A+ LF EM + P+++T +S+L AC H G ++GR
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 399
Query: 327 -------------------------EFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEA 431
+ FNS++H L + MI A G + +
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILH-----KSLSSWNAMIFGFAMHGRADAS 454
Query: 432 MSLVERME---MEPDGAIWGSILGACRIYKNLELAEY 533
L RM ++PD + +L AC L+L +
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
>gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis pumila]
Length = 710
Score = 477 bits (1227), Expect = e-132
Identities = 223/360 (61%), Positives = 282/360 (78%), Gaps = 1/360 (0%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPN-ETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAM 179
A+D+G+W+H+YI+K + N +L TSLI+MYAKCG+IEAA+ +F +M +SL+SWNAM
Sbjct: 351 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410
Query: 180 ISGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYN 359
I G AMHG AN A +FS M K + PD+ITFV +LSAC HSG+ +LGR F SM DY
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYK 470
Query: 360 IFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYAS 539
+ P+L+HYGCMIDL +GLF+EA ++ MEMEPDG IW S+L AC+++ N+EL E +
Sbjct: 471 LMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYA 530
Query: 540 EKLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEF 719
+ L K+EP+NPG+Y+LLSNIYA RW++VA+ R LNDKG+KKVPG +SIE+D VVHEF
Sbjct: 531 QNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEF 590
Query: 720 LVSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAY 899
++ D+ H ++ EIY MLEE++ LLE AG V DTSEV +++EEWKEG L HSEKLAIA+
Sbjct: 591 IIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 650
Query: 900 GLISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
GLISTKPGT L IVKNLRVC NCH ATKLISKI+ REIIARDR+RFHHF+DG CSC DYW
Sbjct: 651 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710
Score = 100 bits (250), Expect = 8e-19
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 4/210 (1%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI YA G IE+A +F + K + SWNA ISG A G A++LF +M K V
Sbjct: 172 YTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNV 231
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
RPDE T V+VLSAC SG LGR+ +S I+D+ L+ +IDL ++ G E A
Sbjct: 232 RPDESTMVTVLSACAQSGSIELGRQ-VHSWINDHGFGXNLKIVNALIDLYSKCGELETAC 290
Query: 435 SLVERMEMEPDGAIWGSILGACRIYKNLELAEYA----SEKLFKLEPDNPGAYILLSNIY 602
L + + D W +++G Y ++ L + A + L E N + + +
Sbjct: 291 GLFQGLS-NKDVISWNTLIGG---YTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSAC 346
Query: 603 AGFGRWDKVARIRTFLNDKGIKKVPGSTSI 692
A G D I ++ DK +K V ++S+
Sbjct: 347 AHLGAIDIGRWIHVYI-DKRLKGVTNASSL 375
Score = 80.9 bits (198), Expect = 9e-13
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 6/156 (3%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+++LG+ VH +I H N + +LI++Y+KCG +E A +F + K + SWN +I
Sbjct: 250 SIELGRQVHSWINDHGFGX-NLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLI 308
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDY-- 356
G A+ LF +M + +P+++T +S+LSAC H G ++GR IH Y
Sbjct: 309 GGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGR-----WIHVYID 363
Query: 357 ----NIFPQLQHYGCMIDLLARAGLFEEAMSLVERM 452
+ +ID+ A+ G E A + + M
Sbjct: 364 KRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM 399
>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 476 bits (1226), Expect = e-132
Identities = 224/360 (62%), Positives = 283/360 (78%), Gaps = 1/360 (0%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLW-TSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAM 179
A+++G+W+H+YI K + N + TSLI+MYAKCG+IEAA+ +F ++ +SL+SWNAM
Sbjct: 336 AIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAM 395
Query: 180 ISGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDYN 359
I G AMHG AN A +FS M K ++ PD+ITFV +LSAC HSG+ +LGR F SM DY
Sbjct: 396 IFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYK 455
Query: 360 IFPQLQHYGCMIDLLARAGLFEEAMSLVERMEMEPDGAIWGSILGACRIYKNLELAEYAS 539
I P+L+HYGCMIDLL +GLF+EA ++ MEMEPDG IW S+L AC+++ N+EL E +
Sbjct: 456 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYA 515
Query: 540 EKLFKLEPDNPGAYILLSNIYAGFGRWDKVARIRTFLNDKGIKKVPGSTSIEVDGVVHEF 719
+ L K+EP NPG+Y+LLSNIYA GRW++VA+IR LNDKG+KKVPG +SIE+D VVHEF
Sbjct: 516 QNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEF 575
Query: 720 LVSDRTHSKSAEIYQMLEEVDRLLEMAGHVNDTSEVYYDVDEEWKEGVLCEHSEKLAIAY 899
++ D+ H ++ EIY MLEE++ LLE AG V DTSEV +++EEWKEG L HSEKLAIA+
Sbjct: 576 IIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAF 635
Query: 900 GLISTKPGTTLRIVKNLRVCGNCHSATKLISKIFDREIIARDRSRFHHFKDGGCSCMDYW 1079
GLISTKPGT L IVKNLRVC NCH ATKLISKI+ REIIARDR+RFHHF+DG CSC DYW
Sbjct: 636 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
Score = 97.4 bits (241), Expect = 9e-18
Identities = 72/209 (34%), Positives = 104/209 (49%), Gaps = 4/209 (1%)
Frame = +3
Query: 75 WTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMISGLAMHGEANRAIQLFSEMAKEKV 254
+T+LI YA G I +A+ +F + K + SWNAMISG A G A++LF EM K V
Sbjct: 157 YTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNV 216
Query: 255 RPDEITFVSVLSACCHSGLANLGREFFNSMIHDYNIFPQLQHYGCMIDLLARAGLFEEAM 434
RPDE T VSV+SAC S LGR+ +S I D+ L+ +IDL + G E A
Sbjct: 217 RPDESTMVSVVSACAQSASIELGRQ-VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 275
Query: 435 SLVERMEMEPDGAIWGSILGACRIYKNLELAEYA----SEKLFKLEPDNPGAYILLSNIY 602
L E + + D W +++G Y ++ L + A E L E N + +
Sbjct: 276 GLFEGLSYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPAC 331
Query: 603 AGFGRWDKVARIRTFLNDKGIKKVPGSTS 689
A G + I ++N K +K V ++S
Sbjct: 332 AHLGAIEIGRWIHVYIN-KRLKGVANASS 359
Score = 80.5 bits (197), Expect = 1e-12
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Frame = +3
Query: 3 ALDLGKWVHIYIEKHYQDFPNETLWTSLINMYAKCGNIEAAKHIFYNMQTKSLASWNAMI 182
+++LG+ VH +I+ H N + +LI++Y KCG +E A +F + K + SWN +I
Sbjct: 235 SIELGRQVHSWIDDHGFG-SNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLI 293
Query: 183 SGLAMHGEANRAIQLFSEMAKEKVRPDEITFVSVLSACCHSGLANLGREFFNSMIHDY-- 356
G A+ LF EM + P+++T +S+L AC H G +GR IH Y
Sbjct: 294 GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGR-----WIHVYIN 348
Query: 357 ----NIFPQLQHYGCMIDLLARAGLFEEAMSLVE 446
+ H +ID+ A+ G E A + +
Sbjct: 349 KRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD 382