BLASTX nr result
ID: Rehmannia25_contig00024693
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00024693
(311 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ... 83 4e-14
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi... 82 7e-14
gb|EEC68990.1| hypothetical protein OsI_37759 [Oryza sativa Indi... 81 1e-13
ref|NP_001066352.1| Os12g0194800 [Oryza sativa Japonica Group] g... 81 1e-13
ref|XP_006663893.1| PREDICTED: tRNA pseudouridine synthase-like ... 81 2e-13
ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-lik... 81 2e-13
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik... 80 2e-13
gb|EXB29043.1| tRNA pseudouridine synthase A [Morus notabilis] 80 3e-13
ref|XP_003578802.1| PREDICTED: tRNA pseudouridine synthase A-lik... 80 4e-13
ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutr... 79 6e-13
gb|EOX97062.1| Pseudouridine synthase family protein isoform 4 [... 79 6e-13
gb|EOX97060.1| Pseudouridine synthase family protein isoform 2 [... 79 6e-13
gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [... 79 6e-13
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik... 77 2e-12
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ... 77 2e-12
ref|XP_004977156.1| PREDICTED: tRNA pseudouridine synthase-like ... 77 3e-12
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop... 77 3e-12
dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] g... 77 3e-12
ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arab... 77 3e-12
gb|AAT06466.1| At1g09800 [Arabidopsis thaliana] 77 3e-12
>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
tuberosum]
Length = 389
Score = 82.8 bits (203), Expect = 4e-14
Identities = 50/103 (48%), Positives = 58/103 (56%)
Frame = +2
Query: 2 QKFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRC 181
QKF+GQP V VFCSSRT + ++ ++
Sbjct: 97 QKFVGQP--VSVFCSSRT----------DAGVHALSNVCHVDVE---------------- 128
Query: 182 SCAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPG+VLPPHEP VVKRAVNHFLQKNEGD+MVIDV
Sbjct: 129 ----RISKRKPGDVLPPHEPLVVKRAVNHFLQKNEGDIMVIDV 167
>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
gi|297739525|emb|CBI29707.3| unnamed protein product
[Vitis vinifera]
Length = 380
Score = 82.0 bits (201), Expect = 7e-14
Identities = 49/102 (48%), Positives = 58/102 (56%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT + ++ ++
Sbjct: 97 KFIGQP--VSIFCSSRT----------DAGVHALSNVCHVDVE----------------- 127
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEP+VV+RAVNHFLQKNEGD+MVIDV
Sbjct: 128 ---RISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDV 166
>gb|EEC68990.1| hypothetical protein OsI_37759 [Oryza sativa Indica Group]
Length = 391
Score = 81.3 bits (199), Expect = 1e-13
Identities = 51/102 (50%), Positives = 57/102 (55%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT TG+ + + C
Sbjct: 106 KFIGQP--VSIFCSSRT---------------------DTGVHALSNV--------CHVD 134
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGE+LPPHEP VVKRAVNHFLQKNEGD+MV DV
Sbjct: 135 VE-RISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDV 175
>ref|NP_001066352.1| Os12g0194800 [Oryza sativa Japonica Group]
gi|108862288|gb|ABA96079.2| tRNA pseudouridine synthase
family protein, putative, expressed [Oryza sativa
Japonica Group] gi|113648859|dbj|BAF29371.1|
Os12g0194800 [Oryza sativa Japonica Group]
gi|215678805|dbj|BAG95242.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222616774|gb|EEE52906.1| hypothetical protein
OsJ_35509 [Oryza sativa Japonica Group]
Length = 391
Score = 81.3 bits (199), Expect = 1e-13
Identities = 51/102 (50%), Positives = 57/102 (55%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT TG+ + + C
Sbjct: 106 KFIGQP--VSIFCSSRT---------------------DTGVHALSNV--------CHVD 134
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGE+LPPHEP VVKRAVNHFLQKNEGD+MV DV
Sbjct: 135 VE-RISKRKPGEMLPPHEPGVVKRAVNHFLQKNEGDIMVTDV 175
>ref|XP_006663893.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Oryza
brachyantha]
Length = 397
Score = 80.9 bits (198), Expect = 2e-13
Identities = 49/102 (48%), Positives = 56/102 (54%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT + ++ ++
Sbjct: 112 KFIGQP--VSIFCSSRT----------DAGVHALSNVCHVDVE----------------- 142
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEP VVKRAVNHFLQKNEGD+MV DV
Sbjct: 143 ---RISKRKPGEVLPPHEPGVVKRAVNHFLQKNEGDIMVTDV 181
>ref|XP_004230453.1| PREDICTED: tRNA pseudouridine synthase A-like [Solanum
lycopersicum]
Length = 389
Score = 80.9 bits (198), Expect = 2e-13
Identities = 50/103 (48%), Positives = 57/103 (55%)
Frame = +2
Query: 2 QKFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRC 181
QKFIGQP V VFCSSRT + ++ ++
Sbjct: 97 QKFIGQP--VSVFCSSRT----------DAGVHALSNVCHVDVE---------------- 128
Query: 182 SCAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPG+VLPPHEP VVKRAVNHFLQKN GD+MVIDV
Sbjct: 129 ----RISKRKPGDVLPPHEPLVVKRAVNHFLQKNAGDIMVIDV 167
>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
subsp. vesca]
Length = 350
Score = 80.5 bits (197), Expect = 2e-13
Identities = 48/103 (46%), Positives = 58/103 (56%)
Frame = +2
Query: 2 QKFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRC 181
+KFIGQP V +FCSSRT + ++ ++
Sbjct: 76 RKFIGQP--VSIFCSSRT----------DAGVHALSNVCHVDIE---------------- 107
Query: 182 SCAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEP VV+RAVNHFLQKNEGD+MV+DV
Sbjct: 108 ----RISKRKPGEVLPPHEPIVVQRAVNHFLQKNEGDVMVVDV 146
>gb|EXB29043.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 326
Score = 80.1 bits (196), Expect = 3e-13
Identities = 54/111 (48%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Frame = +2
Query: 2 QKFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLF----- 166
Q IG PQ S + N I YL+ Y+ + + QL NC G+
Sbjct: 40 QSGIGPPQ------KSMSQNPRIQRYLVAIE-YVGTRFSGSQQQL-NCRTVMGVLEDAGV 91
Query: 167 --LGCRCSCAM-RISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
L C + RISKRKPGEVLPPHEP+VVKRAVNHFLQKNEGD+MV+DV
Sbjct: 92 HALSNVCHVDVERISKRKPGEVLPPHEPAVVKRAVNHFLQKNEGDIMVVDV 142
>ref|XP_003578802.1| PREDICTED: tRNA pseudouridine synthase A-like [Brachypodium
distachyon]
Length = 386
Score = 79.7 bits (195), Expect = 4e-13
Identities = 48/102 (47%), Positives = 56/102 (54%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KF+GQP V VFCSSRT + ++ ++
Sbjct: 100 KFVGQP--VSVFCSSRT----------DAGVHALSNVCHVDVE----------------- 130
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPH+P VVKRAVNHFLQKNEGD+MV DV
Sbjct: 131 ---RISKRKPGEVLPPHDPGVVKRAVNHFLQKNEGDIMVTDV 169
>ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
gi|557095305|gb|ESQ35887.1| hypothetical protein
EUTSA_v10007981mg [Eutrema salsugineum]
Length = 368
Score = 79.0 bits (193), Expect = 6e-13
Identities = 47/102 (46%), Positives = 57/102 (55%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT + ++ ++
Sbjct: 94 KFIGQP--VKIFCSSRT----------DAGVHALSNVCHVDVE----------------- 124
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEP VV+RAVNHFLQ+N+GD+MVIDV
Sbjct: 125 ---RISKRKPGEVLPPHEPGVVQRAVNHFLQRNDGDVMVIDV 163
>gb|EOX97062.1| Pseudouridine synthase family protein isoform 4 [Theobroma cacao]
Length = 341
Score = 79.0 bits (193), Expect = 6e-13
Identities = 48/102 (47%), Positives = 57/102 (55%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT + ++ ++
Sbjct: 86 KFIGQP--VSIFCSSRT----------DAGVHALSNVCHVDVE----------------- 116
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEPSVV+RAVNHFLQK+EGD+ VIDV
Sbjct: 117 ---RISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDV 155
>gb|EOX97060.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
Length = 345
Score = 79.0 bits (193), Expect = 6e-13
Identities = 48/102 (47%), Positives = 57/102 (55%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT + ++ ++
Sbjct: 86 KFIGQP--VSIFCSSRT----------DAGVHALSNVCHVDVE----------------- 116
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEPSVV+RAVNHFLQK+EGD+ VIDV
Sbjct: 117 ---RISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDV 155
>gb|EOX97059.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
Length = 374
Score = 79.0 bits (193), Expect = 6e-13
Identities = 48/102 (47%), Positives = 57/102 (55%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT + ++ ++
Sbjct: 86 KFIGQP--VSIFCSSRT----------DAGVHALSNVCHVDVE----------------- 116
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEPSVV+RAVNHFLQK+EGD+ VIDV
Sbjct: 117 ---RISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVIDV 155
>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
Length = 352
Score = 77.0 bits (188), Expect = 2e-12
Identities = 47/103 (45%), Positives = 56/103 (54%)
Frame = +2
Query: 2 QKFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRC 181
QKFIGQP V VFCSSRT + ++ ++
Sbjct: 82 QKFIGQP--VSVFCSSRT----------DAGVHALSNVCHVDVE---------------- 113
Query: 182 SCAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEP VV +AVNHFLQK+EGD+ V+DV
Sbjct: 114 ----RISKRKPGEVLPPHEPGVVHKAVNHFLQKHEGDVTVVDV 152
>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 372
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +2
Query: 194 RISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEP+VV+RAVNHFLQKNEGD+MV DV
Sbjct: 120 RISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDV 158
>ref|XP_004977156.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Setaria
italica]
Length = 385
Score = 76.6 bits (187), Expect = 3e-12
Identities = 49/102 (48%), Positives = 55/102 (53%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT G+ + + C
Sbjct: 99 KFIGQP--VSIFCSSRT---------------------DAGVHALSNI--------CHVD 127
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVL PHEP VVKRAVNHFLQ+NEGD+MV DV
Sbjct: 128 VE-RISKRKPGEVLTPHEPGVVKRAVNHFLQRNEGDIMVTDV 168
>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
gi|332190374|gb|AEE28495.1| pseudouridine synthase
family protein [Arabidopsis thaliana]
Length = 372
Score = 76.6 bits (187), Expect = 3e-12
Identities = 46/102 (45%), Positives = 56/102 (54%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT + ++ ++
Sbjct: 90 KFIGQP--VKIFCSSRT----------DAGVHALSNVCHVDVE----------------- 120
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEP VV+RAVNHFLQ+ +GD+MVIDV
Sbjct: 121 ---RISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDV 159
>dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana]
gi|51971573|dbj|BAD44451.1| unnamed protein product
[Arabidopsis thaliana]
Length = 368
Score = 76.6 bits (187), Expect = 3e-12
Identities = 46/102 (45%), Positives = 56/102 (54%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT + ++ ++
Sbjct: 86 KFIGQP--VKIFCSSRT----------DAGVHALSNVCHVDVE----------------- 116
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEP VV+RAVNHFLQ+ +GD+MVIDV
Sbjct: 117 ---RISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDV 155
>ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arabidopsis lyrata subsp.
lyrata] gi|297338368|gb|EFH68785.1| hypothetical protein
ARALYDRAFT_471082 [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 76.6 bits (187), Expect = 3e-12
Identities = 46/102 (45%), Positives = 56/102 (54%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT + ++ ++
Sbjct: 91 KFIGQP--VKIFCSSRT----------DAGVHALSNVCHVDVE----------------- 121
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEP VV+RAVNHFLQ+ +GD+MVIDV
Sbjct: 122 ---RISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDV 160
>gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]
Length = 372
Score = 76.6 bits (187), Expect = 3e-12
Identities = 46/102 (45%), Positives = 56/102 (54%)
Frame = +2
Query: 5 KFIGQPQPVPVFCSSRTVNSLIPFYLIEFSIYIFFGYVSTGMQLFNCLGKCGLFLGCRCS 184
KFIGQP V +FCSSRT + ++ ++
Sbjct: 90 KFIGQP--VKIFCSSRT----------DAGVHALSNVCHVDVE----------------- 120
Query: 185 CAMRISKRKPGEVLPPHEPSVVKRAVNHFLQKNEGDMMVIDV 310
RISKRKPGEVLPPHEP VV+RAVNHFLQ+ +GD+MVIDV
Sbjct: 121 ---RISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMVIDV 159