BLASTX nr result

ID: Rehmannia25_contig00024491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00024491
         (546 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indi...    64   3e-08
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    59   7e-07
emb|CAE05479.1| OSJNBa0006A01.25 [Oryza sativa Japonica Group] g...    59   1e-06
gb|EEE61599.1| hypothetical protein OsJ_16008 [Oryza sativa Japo...    59   1e-06
gb|EAY95391.1| hypothetical protein OsI_17229 [Oryza sativa Indi...    59   1e-06
ref|XP_002456488.1| hypothetical protein SORBIDRAFT_03g037190 [S...    56   5e-06
ref|XP_006450894.1| hypothetical protein CICLE_v10010478mg, part...    55   8e-06

>gb|EAZ03196.1| hypothetical protein OsI_25347 [Oryza sativa Indica Group]
          Length = 858

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
 Frame = -2

Query: 542  EGRYGIGGIVRNSCGDIILVFGQTIEQPGSVLEAEIFAIMAGVEVCRNIHLIPNVIGTDS 363
            +G  GIG I+RNS G+++     ++ + G  LEAE+ A   G+ +     L+P VI +D 
Sbjct: 721  DGSGGIGAILRNSAGEVVFASCGSMNRCGGALEAELLACRDGLTLVLQWTLLPIVIESDC 780

Query: 362  LLSVQAVTEREELKGYVESWAYSVRAWLDNATDTELIHIRRSANSAAHSIAY-FASFALS 186
            L ++Q +  +EE +  +      ++  +    D  ++ I R+ NS +H++AY   S AL+
Sbjct: 781  LQAIQLIQSKEEERSDLAFLIREIKHLMAGNRDIVIMKIHRNQNSVSHALAYKGCSEALT 840

Query: 185  PFVWD 171
             F  D
Sbjct: 841  AFWLD 845


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
 Frame = -2

Query: 533  YGIGGIVRNSCGDIILVFGQTIEQPGSVLEAEIFAIMAGVEVCRNIHLIPNVIGTDSLLS 354
            +G G I+R+  G +I+  G+  + P S L AE+ AI  G+++     L   ++ +D L +
Sbjct: 1513 FGGGTIIRDEFGSLIVAGGKNFQHPVSSLVAELLAIKVGLDLVVERRLRNIMVESDCLEA 1572

Query: 353  VQAVTEREELKGYVESWAYSVRAWLDNATDTELIHIRRSANSAAHSIAYFASFALSPFVW 174
            +  +  +E            ++  +     + + H+RR  N+AAH+IA F +     +VW
Sbjct: 1573 IHLLNSKERCLAPEGGLVEDIQNTMALVNISSIYHVRREGNTAAHAIAKFVARNNGRYVW 1632

Query: 173  -DSGSIPIWLKDIVRED 126
             + G  P WL  ++  D
Sbjct: 1633 LEDG--PDWLMSLICHD 1647


>emb|CAE05479.1| OSJNBa0006A01.25 [Oryza sativa Japonica Group]
           gi|39545855|emb|CAE03933.3| OSJNba0093F12.7 [Oryza
           sativa Japonica Group]
          Length = 127

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/107 (29%), Positives = 54/107 (50%)
 Frame = -2

Query: 530 GIGGIVRNSCGDIILVFGQTIEQPGSVLEAEIFAIMAGVEVCRNIHLIPNVIGTDSLLSV 351
           GIG I+RNS GD+I      +EQ  S LEAEI A   G+ +     L+P +I +D   ++
Sbjct: 16  GIGAILRNSTGDVIFAVYGFVEQSQSALEAEILACKEGIRLALQWTLLPIIIESDCAEAI 75

Query: 350 QAVTEREELKGYVESWAYSVRAWLDNATDTELIHIRRSANSAAHSIA 210
           Q +    +L+         ++  +  A + +L  + R+ N  +H +A
Sbjct: 76  QMILSEGKLRSAHTFLVREIQGMVKGAREMKLKKVNRNCNRISHVLA 122


>gb|EEE61599.1| hypothetical protein OsJ_16008 [Oryza sativa Japonica Group]
          Length = 127

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 32/107 (29%), Positives = 54/107 (50%)
 Frame = -2

Query: 530 GIGGIVRNSCGDIILVFGQTIEQPGSVLEAEIFAIMAGVEVCRNIHLIPNVIGTDSLLSV 351
           GIG I+RNS GD+I      +EQ  S LEAEI A   G+ +     L+P +I +D   ++
Sbjct: 16  GIGAILRNSTGDVIFAVYGFVEQSQSALEAEILACKEGIRLALQWTLLPIIIESDCAEAI 75

Query: 350 QAVTEREELKGYVESWAYSVRAWLDNATDTELIHIRRSANSAAHSIA 210
           Q +    +L+         ++  +  A + +L  + R+ N  +H +A
Sbjct: 76  QMILSEGKLRSAHTFLVREIQGMVKGAREMKLKKVNRNCNRISHVLA 122


>gb|EAY95391.1| hypothetical protein OsI_17229 [Oryza sativa Indica Group]
          Length = 172

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/123 (28%), Positives = 57/123 (46%)
 Frame = -2

Query: 530 GIGGIVRNSCGDIILVFGQTIEQPGSVLEAEIFAIMAGVEVCRNIHLIPNVIGTDSLLSV 351
           GIG I+RNS GD+I      +EQ  S LEAEI A   G+ +     L+P +I +D   ++
Sbjct: 36  GIGAILRNSTGDVIFAVYGFVEQCQSALEAEILACKEGIRLALQWTLLPIIIESDCAEAI 95

Query: 350 QAVTEREELKGYVESWAYSVRAWLDNATDTELIHIRRSANSAAHSIAYFASFALSPFVWD 171
           Q +    +L+         ++  +  A + +L  + R+ N  +H +A           W 
Sbjct: 96  QLILSEGKLRSAHTFLVREIQGMVKGAREMKLKKVNRNCNRISHVLANKGRCESLTDFWP 155

Query: 170 SGS 162
            GS
Sbjct: 156 DGS 158


>ref|XP_002456488.1| hypothetical protein SORBIDRAFT_03g037190 [Sorghum bicolor]
           gi|241928463|gb|EES01608.1| hypothetical protein
           SORBIDRAFT_03g037190 [Sorghum bicolor]
          Length = 589

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
 Frame = -2

Query: 539 GRYGIGGIVRNSCGDIILVFGQTIEQPGSVLEAEIFAIMAGVEVCRNIHLIPNVIG-TDS 363
           G    G +VR+S G+      + +   GSVL AE  AI  G+ +      + ++IG TD+
Sbjct: 449 GTGAAGAVVRDSSGNFCAASARWLGPVGSVLIAEAEAIRDGLRLIPQ-GTMEHIIGETDA 507

Query: 362 LLSVQAVTEREELKGYVESWAYSVRAWLDNATDTELIHIRRSANSAAHSIAYFASFALSP 183
              V     R   +  + +    +   +   T  ELIH+RR ANS AH+ A FAS +L  
Sbjct: 508 REVVALWKNRTRQRSEIAAILKEIEEIVSAFTSFELIHVRREANSVAHTCARFASSSLDS 567

Query: 182 FVWDSGSIPIWLKDIVRED 126
            VW S   P +L+  ++ D
Sbjct: 568 HVWFSP--PSFLQRCLQSD 584


>ref|XP_006450894.1| hypothetical protein CICLE_v10010478mg, partial [Citrus clementina]
           gi|557554120|gb|ESR64134.1| hypothetical protein
           CICLE_v10010478mg, partial [Citrus clementina]
          Length = 250

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 34/123 (27%), Positives = 63/123 (51%)
 Frame = -2

Query: 542 EGRYGIGGIVRNSCGDIILVFGQTIEQPGSVLEAEIFAIMAGVEVCRNIHLIPNVIGTDS 363
           +G  G+G ++RNS G+               ++A   AI+ G+++   + LIP V+ +DS
Sbjct: 130 DGLAGLGVVIRNSKGEF--------------MDASTSAILEGIKLVEELGLIPLVVESDS 175

Query: 362 LLSVQAVTEREELKGYVESWAYSVRAWLDNATDTELIHIRRSANSAAHSIAYFASFALSP 183
           L  ++ +++R      ++     VR ++   +   + HI RS NSAAH++A  A     P
Sbjct: 176 LNVIRLMSKRISSNLEIDWVITEVREFIYKNSVFAVKHISRSRNSAAHNVAKIALARSEP 235

Query: 182 FVW 174
           ++W
Sbjct: 236 YMW 238


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