BLASTX nr result
ID: Rehmannia25_contig00024439
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00024439
(433 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote... 93 3e-17
emb|CBI24843.3| unnamed protein product [Vitis vinifera] 93 3e-17
ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 prote... 91 2e-16
ref|XP_006439063.1| hypothetical protein CICLE_v100309242mg, par... 91 2e-16
ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 prote... 85 9e-15
gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobr... 84 2e-14
ref|XP_004515558.1| PREDICTED: sister chromatid cohesion 1 prote... 83 4e-14
ref|XP_004308212.1| PREDICTED: sister chromatid cohesion 1 prote... 81 2e-13
gb|EXB59938.1| Sister chromatid cohesion 1 protein 3 [Morus nota... 79 5e-13
ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicag... 78 1e-12
ref|XP_006289685.1| hypothetical protein CARUB_v10003242mg [Caps... 77 2e-12
ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 prote... 76 4e-12
ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 prote... 76 4e-12
ref|XP_002872750.1| hypothetical protein ARALYDRAFT_911799 [Arab... 74 2e-11
ref|XP_006585340.1| PREDICTED: sister chromatid cohesion 1 prote... 69 5e-10
gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidops... 69 7e-10
ref|NP_191514.1| sister chromatid cohesion 1 protein 3 [Arabidop... 69 7e-10
ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arab... 69 7e-10
ref|XP_006290264.1| hypothetical protein CARUB_v10016763mg [Caps... 67 2e-09
ref|XP_004973133.1| PREDICTED: sister chromatid cohesion 1 prote... 67 3e-09
>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
vinifera]
Length = 761
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/56 (80%), Positives = 49/56 (87%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSKGQF 171
+LSLNKIL+GK RKI ARMFFETLVLKNYGLVD QE PY DITLK+TPKLSK +F
Sbjct: 706 ELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSKARF 761
>emb|CBI24843.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/56 (80%), Positives = 49/56 (87%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSKGQF 171
+LSLNKIL+GK RKI ARMFFETLVLKNYGLVD QE PY DITLK+TPKLSK +F
Sbjct: 654 ELSLNKILEGKTRKIAARMFFETLVLKNYGLVDVQQEEPYGDITLKMTPKLSKARF 709
>ref|XP_006482841.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Citrus
sinensis]
Length = 735
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSK 162
DLSLNKIL GK RK+CARMFFETLVLK+YGL+D QE PY DITLK+TPKLSK
Sbjct: 680 DLSLNKILQGKTRKLCARMFFETLVLKSYGLLDVEQEQPYGDITLKLTPKLSK 732
>ref|XP_006439063.1| hypothetical protein CICLE_v100309242mg, partial [Citrus
clementina] gi|557541259|gb|ESR52303.1| hypothetical
protein CICLE_v100309242mg, partial [Citrus clementina]
Length = 123
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSK 162
DLSLNKIL GK RK+CARMFFETLVLK+YGL+D QE PY DITLK+TPKLSK
Sbjct: 68 DLSLNKILQGKTRKLCARMFFETLVLKSYGLLDVEQEQPYGDITLKLTPKLSK 120
>ref|XP_004150164.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cucumis
sativus]
Length = 908
Score = 85.1 bits (209), Expect = 9e-15
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = +1
Query: 1 EDLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSKGQ 168
+DLSLN IL+GK RK+CARMF+ETLVLK+YGL+D Q+ PY DITLK+TPKLS Q
Sbjct: 852 QDLSLNGILEGKRRKLCARMFYETLVLKSYGLIDVQQDVPYGDITLKLTPKLSMVQ 907
>gb|EOX96748.1| Cohesin subunit rad21, putative isoform 1 [Theobroma cacao]
Length = 677
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSK 162
DLSLNKIL+GK RKICARMFFETLVLK+YGLVD Q++ DITLK+TP LSK
Sbjct: 622 DLSLNKILEGKTRKICARMFFETLVLKSYGLVDVRQDDANGDITLKLTPTLSK 674
>ref|XP_004515558.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Cicer
arietinum]
Length = 698
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/56 (71%), Positives = 44/56 (78%)
Frame = +1
Query: 1 EDLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSKGQ 168
ED SLNKIL+GK RKI ARMFFE LVLK G +D QENPYDDI+LKVT LS G+
Sbjct: 642 EDFSLNKILEGKTRKIAARMFFEVLVLKTRGFIDVQQENPYDDISLKVTKALSNGK 697
>ref|XP_004308212.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Fragaria
vesca subsp. vesca]
Length = 736
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSK 162
DLSLNKIL+GK RK+CARMFFETLVLK+Y L+D QE PY DI+LK+T LSK
Sbjct: 683 DLSLNKILEGKRRKLCARMFFETLVLKSYDLIDVKQEVPYGDISLKLTQTLSK 735
>gb|EXB59938.1| Sister chromatid cohesion 1 protein 3 [Morus notabilis]
Length = 712
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/56 (69%), Positives = 44/56 (78%)
Frame = +1
Query: 1 EDLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSKGQ 168
EDLSLNK+L GK R +CARMFF TLVLK+ GLVD +E PY DITLK+TP L K Q
Sbjct: 656 EDLSLNKLLKGKTRTLCARMFFGTLVLKSNGLVDVVEEEPYGDITLKLTPALLKAQ 711
>ref|XP_003598058.1| Sister chromatid cohesion 1 protein [Medicago truncatula]
gi|355487106|gb|AES68309.1| Sister chromatid cohesion 1
protein [Medicago truncatula]
Length = 737
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/56 (66%), Positives = 42/56 (75%)
Frame = +1
Query: 1 EDLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSKGQ 168
ED SLNKILDGK RKI ARMFFE LVLK + L+D QE PY DI+ K+TP L K +
Sbjct: 681 EDFSLNKILDGKTRKIAARMFFEVLVLKTHDLIDVQQEEPYGDISFKLTPALDKAK 736
>ref|XP_006289685.1| hypothetical protein CARUB_v10003242mg [Capsella rubella]
gi|482558391|gb|EOA22583.1| hypothetical protein
CARUB_v10003242mg [Capsella rubella]
Length = 732
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = +1
Query: 1 EDLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLS 159
EDLSL+KIL+GK RKI ARMF+ETLVLK+ GL+D Q+ PY DITLK+ P LS
Sbjct: 675 EDLSLSKILEGKTRKIAARMFYETLVLKSRGLIDMKQDQPYSDITLKLMPALS 727
>ref|XP_006366497.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
tuberosum]
Length = 675
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSK 162
D+SLN IL+GK ++ICARMF+ETLVL+N GLV A+Q PY DITLKVT KL++
Sbjct: 621 DISLNAILEGKKKRICARMFYETLVLENCGLVRANQHEPYGDITLKVTSKLTE 673
>ref|XP_004229595.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Solanum
lycopersicum]
Length = 668
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLSK 162
D+SLN IL+GK ++ICARMF+ETLVL+N GLV A+Q PY DITLKVT KL++
Sbjct: 612 DISLNAILEGKKKRICARMFYETLVLENCGLVRANQHEPYGDITLKVTSKLTE 664
>ref|XP_002872750.1| hypothetical protein ARALYDRAFT_911799 [Arabidopsis lyrata subsp.
lyrata] gi|297318587|gb|EFH49009.1| hypothetical protein
ARALYDRAFT_911799 [Arabidopsis lyrata subsp. lyrata]
Length = 653
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKL 156
DLSLNKIL+GK RKI ARMF+ETLVLK+ GL+D Q+ PY DI+LK+ P L
Sbjct: 597 DLSLNKILEGKTRKIAARMFYETLVLKSRGLIDMKQDQPYSDISLKLMPAL 647
>ref|XP_006585340.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Glycine max]
Length = 705
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKL 156
DLSLNKIL GK + I ARMFFE LVLK GL+D QE PY D++LK+ P L
Sbjct: 655 DLSLNKILKGKTKNIAARMFFEVLVLKTNGLLDVQQEEPYGDVSLKLVPML 705
>gb|AAG44843.1|AF281155_1 cohesion family protein SYN3 [Arabidopsis thaliana]
Length = 692
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKL 156
DLSL++IL GK RK+ ARMFFETLVLK+ GL+D Q+ PY DI LK+ P L
Sbjct: 636 DLSLSEILAGKTRKLAARMFFETLVLKSRGLIDMQQDRPYGDIALKLMPAL 686
>ref|NP_191514.1| sister chromatid cohesion 1 protein 3 [Arabidopsis thaliana]
gi|30913284|sp|Q9FQ19.2|SCC13_ARATH RecName: Full=Sister
chromatid cohesion 1 protein 3; AltName: Full=SCC1
homolog 3; Short=AtRAD21-2
gi|18157647|gb|AAL62059.1|AF400128_1 RAD21-2
[Arabidopsis thaliana] gi|6996291|emb|CAB75452.1|
putative protein [Arabidopsis thaliana]
gi|332646418|gb|AEE79939.1| sister chromatid cohesion 1
protein 3 [Arabidopsis thaliana]
Length = 693
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKL 156
DLSL++IL GK RK+ ARMFFETLVLK+ GL+D Q+ PY DI LK+ P L
Sbjct: 637 DLSLSEILAGKTRKLAARMFFETLVLKSRGLIDMQQDRPYGDIALKLMPAL 687
>ref|XP_002876510.1| hypothetical protein ARALYDRAFT_486422 [Arabidopsis lyrata subsp.
lyrata] gi|297322348|gb|EFH52769.1| hypothetical protein
ARALYDRAFT_486422 [Arabidopsis lyrata subsp. lyrata]
Length = 696
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKL 156
DLSL++IL GK RK+ ARMFFETLVLK+ GL+D Q+ PY DI LK+ P L
Sbjct: 640 DLSLSEILAGKTRKLAARMFFETLVLKSRGLIDMQQDRPYGDIALKLMPAL 690
>ref|XP_006290264.1| hypothetical protein CARUB_v10016763mg [Capsella rubella]
gi|482558971|gb|EOA23162.1| hypothetical protein
CARUB_v10016763mg [Capsella rubella]
Length = 702
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = +1
Query: 4 DLSLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKL 156
DLSL+ IL GK RK+ ARMFFETLVLK+ GL+D Q+ PY DI LK+ P L
Sbjct: 646 DLSLSDILAGKTRKLAARMFFETLVLKSRGLIDMQQDKPYGDIGLKLMPAL 696
>ref|XP_004973133.1| PREDICTED: sister chromatid cohesion 1 protein 3-like [Setaria
italica]
Length = 686
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/50 (64%), Positives = 36/50 (72%)
Frame = +1
Query: 10 SLNKILDGKPRKICARMFFETLVLKNYGLVDAHQENPYDDITLKVTPKLS 159
SLNKIL+GK RK ARMFFET VLK+Y +D QE PY DI + V P LS
Sbjct: 633 SLNKILEGKARKQAARMFFETTVLKSYDYIDVQQEEPYGDIEISVKPSLS 682