BLASTX nr result
ID: Rehmannia25_contig00024411
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia25_contig00024411 (403 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein... 62 8e-08 gb|AGO67237.1| f-box family protein [Silene vulgaris] 60 4e-07 ref|XP_004300788.1| PREDICTED: F-box/LRR-repeat protein At3g0303... 57 2e-06 ref|XP_004298789.1| PREDICTED: F-box/LRR-repeat protein At4g1409... 57 2e-06 >ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Cucumis sativus] gi|449503744|ref|XP_004162155.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Cucumis sativus] Length = 512 Score = 62.0 bits (149), Expect = 8e-08 Identities = 28/61 (45%), Positives = 38/61 (62%) Frame = -1 Query: 184 CPKRLKTCEVNKDFINDLPDPILVQILSFLPLRDAIRTVLLPRFGKLWLSMPVLDLDNCV 5 C KR +T E D+I+ LP+ +LV ILS+LP RDA++ L+ RF LW + L D C Sbjct: 4 CSKRTRTEEDRNDWISQLPESVLVDILSYLPTRDAVKMALISRFRNLWTYIHHLSFDECA 63 Query: 4 Y 2 Y Sbjct: 64 Y 64 >gb|AGO67237.1| f-box family protein [Silene vulgaris] Length = 456 Score = 59.7 bits (143), Expect = 4e-07 Identities = 27/59 (45%), Positives = 41/59 (69%) Frame = -1 Query: 178 KRLKTCEVNKDFINDLPDPILVQILSFLPLRDAIRTVLLPRFGKLWLSMPVLDLDNCVY 2 KRL + ++D +++LPD ++V+ILS++P+ DA+RTVLL RFG LW + L D Y Sbjct: 7 KRLCLSKEDRDRLSELPDTVIVRILSYMPIIDAVRTVLLRRFGNLWTLVDTLKFDEDTY 65 >ref|XP_004300788.1| PREDICTED: F-box/LRR-repeat protein At3g03030-like [Fragaria vesca subsp. vesca] Length = 169 Score = 57.0 bits (136), Expect = 2e-06 Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%) Frame = -1 Query: 178 KRLKTCEVNKDFINDLPDPILVQILSFLPLRDAIRT-VLLPRFGKLWLSMPVLDLD 14 KRLK C ++D I+ LPD IL ILSFL R+A++T VL R+ +W S+P+LDLD Sbjct: 15 KRLKPCSNHEDRISGLPDEILCHILSFLFTREAVKTSVLSHRWTNVWTSVPILDLD 70 >ref|XP_004298789.1| PREDICTED: F-box/LRR-repeat protein At4g14096-like [Fragaria vesca subsp. vesca] Length = 516 Score = 57.0 bits (136), Expect = 2e-06 Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 1/72 (1%) Frame = -1 Query: 214 SSNEEKETGWCPKRLKTCEVNKDFINDLPDPILVQILSFLPLRDAIRT-VLLPRFGKLWL 38 S+++ ++ RLK C N+D I+ +PD +L ILSFL R+A++T VL R+ +W Sbjct: 3 SNSKRRKMASYSNRLKLCSDNEDRISGMPDAVLCHILSFLSTREAVKTSVLSHRWNNVWA 62 Query: 37 SMPVLDLDNCVY 2 S+P++D+D Y Sbjct: 63 SVPIVDVDEEQY 74