BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00024328
         (869 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    77   6e-12
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [...    71   6e-10
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    68   4e-09
gb|AAF79804.1|AC020646_27 T32E20.19 [Arabidopsis thaliana]             66   1e-08
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              63   2e-07
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              62   2e-07
gb|ABK28206.1| unknown [Arabidopsis thaliana]                          62   3e-07
ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-lik...    62   3e-07
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    62   4e-07
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              60   1e-06
gb|EMJ04273.1| hypothetical protein PRUPE_ppa023544mg, partial [...    59   2e-06
ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844...    59   2e-06
ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thalia...    58   4e-06
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    57   9e-06

>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 2/214 (0%)
 Frame = -3

Query: 864  CGLHEESLEHLFFHCPRAKNTWKIAPVKWS-HTSQENVNFRGWWQDVCSIKENSFAEDRI 688
            CG  EES+ HL F CP ++  W ++P+  S +    N  F  +   +   KE   AED +
Sbjct: 967  CGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLLSRGKEFDIAEDIM 1026

Query: 687  QLSVYLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGAPQTQSL 508
            ++  ++LW++WK+RN ++F+ V  S + ++D A+ E   +    S +    Y  PQ    
Sbjct: 1027 EIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQEANVWKQANSKEVATEYPPPQVVPA 1086

Query: 507  PTSSTQNIPTVGSSFVAISAVMWDGCKTGFG-GWILNENMQNVRAWTTTRNDYLNSEEAK 331
                T+N+    +S        W    T  G GW+L +    +     +    L+   A+
Sbjct: 1087 NLPPTRNVCQFDAS--------WHLKDTLSGHGWVLVDQDIVLLLGLKSARKSLSPLHAE 1138

Query: 330  LFGVRLTMLSAFGCGIKNITICSEDKDLVCMLNN 229
            +  +   M      G+ + +  S+  D + +L N
Sbjct: 1139 VDSLLWAMECMISLGVSDCSFASDSADFISLLEN 1172


>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
          Length = 920

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 6/234 (2%)
 Frame = -3

Query: 867  MCGLHEESLEHLFFHCPRAKNTWKIAPVKWSHTSQENVNFRGWWQDVCSIKENSFAEDRI 688
            +C  +EES EH  F CP  +  W  +P+ +    Q    F  W+  + + +  S +E   
Sbjct: 647  ICNQYEESEEHAIFLCPWTQAVWFGSPLNYRVNPQSITTFDRWFTGLLNSQMFSKSERVW 706

Query: 687  QLSV--YLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGAPQTQ 514
             LS+  ++ W +WK R  ++F+ + +  + +V+RA +  +EF V++  +     GA    
Sbjct: 707  VLSLVSFISWEIWKARCKFLFEDITIDPRCVVERAASAAEEFDVLRRHEISTRNGA-GVF 765

Query: 513  SLPTSSTQNIPTVGSSFVAISAVMWDGCKTGFGGWILNENMQNVRAWTTTR--NDYLNSE 340
            S PT   +  P V  +        W   + G G  + N N      + + R  N  LN+E
Sbjct: 766  SQPTDIWK--PPVNGAIKINFDAAWKNHEAGLGVVMRNHNKDFCYGFASKRCCNSALNAE 823

Query: 339  -EAKLFGVRLTMLSAFGCGIKNITICSEDKDLV-CMLNNRDTKDWNMTPLAEDI 184
             EA +  +R   L     G   I + S+ K L+  +  N  TK W + PL ++I
Sbjct: 824  TEAAIEALRCASLR----GYSKIEMESDSKVLIDSIKGNVCTKAWTILPLLDEI 873


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 55/254 (21%), Positives = 112/254 (44%)
 Frame = -3

Query: 864  CGLHEESLEHLFFHCPRAKNTWKIAPVKWSHTSQENVNFRGWWQDVCSIKENSFAEDRIQ 685
            CG  EE+ EHL + C  +   W I+P++    + E  +FR W + +    +++   +   
Sbjct: 1095 CGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKDT---EWWA 1151

Query: 684  LSVYLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGAPQTQSLP 505
            L   + W +W  RN WVF+K  ++ +E+V+RA+    EF      + +  + +P      
Sbjct: 1152 LFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEF------EEECAHTSPVETLNT 1205

Query: 504  TSSTQNIPTVGSSFVAISAVMWDGCKTGFGGWILNENMQNVRAWTTTRNDYLNSEEAKLF 325
              +  ++P VG   + + A ++     G GG + +     + A         +   A+  
Sbjct: 1206 HENGWSVPPVGMVKLNVDAAVFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEAC 1265

Query: 324  GVRLTMLSAFGCGIKNITICSEDKDLVCMLNNRDTKDWNMTPLAEDIFILWYLFDSCFFS 145
             +R  +  A+  G +N+ +  + K L   L  + +   ++TP    +  + YL   C  +
Sbjct: 1266 SLRYGLKVAYEAGFRNLVVEMDCKKLFLQLRGKAS---DVTPFGRVVDDILYLASKC-SN 1321

Query: 144  IPDSRWMANCNRLA 103
            +       +CN++A
Sbjct: 1322 VVFEHVKRHCNKVA 1335


>gb|AAF79804.1|AC020646_27 T32E20.19 [Arabidopsis thaliana]
          Length = 957

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
 Frame = -3

Query: 864  CGLHEESLEHLFFHCPRAKNTWKIAPVKW------SHTSQENVNFRGWWQDVCSIKENSF 703
            C L EES+ H+ F+ P A  TWK+A + +      S+  +EN++       + SI  N+ 
Sbjct: 784  CSLEEESICHVLFNYPYATTTWKLAKLSYLSGHTFSNDVEENISVL-----IDSISNNNL 838

Query: 702  AEDRIQLSVYLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGAP 523
             E +  L  +L++ +WK RN +VF K      ++V ++  +  E+ +  +   + G  A 
Sbjct: 839  TEQQKLLPFWLIFRIWKARNNYVFNKFRKCSSKVVSQSEVDVNEWII--NMCERRGNTAT 896

Query: 522  QTQSLPTSSTQNIPTVGSSFVAISAVMWDGCKTGFGGWILNENMQNVRAWTTTRNDYL 349
                L   ++   PTV       +A +        GGWI+ +     +AW ++  D++
Sbjct: 897  TRPPLSQKASWTKPTVSFVKCNFNAGLHKNTTQSTGGWIIRDPEGKEKAWGSSILDHV 954


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 10/277 (3%)
 Frame = -3

Query: 867  MCGLHEESLEHLFFHCPRAKNTWKIAPVKWSHTSQENVNFRGWWQDVCSIKE-NSFAEDR 691
            +CG  +E+L+HLF  C  A+  W  A    +  +  +++   W +  CS ++ + ++ + 
Sbjct: 1080 VCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYSTNW 1139

Query: 690  IQLSVYLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGAPQTQS 511
              +  Y+LW LWK RN  VF     +  ++++R+  E  E   + + +           +
Sbjct: 1140 SLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKR------TGLQTA 1193

Query: 510  LPTSSTQNIPTVGSSFVAISAVMWDG-CKT-----GFGGWILNENMQNVRAWTT---TRN 358
              T    + P  G  F  +++   DG CK+       GG + NEN   V  +T    T N
Sbjct: 1194 FQTWVVWSPPAAG--FTKLNS---DGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTAN 1248

Query: 357  DYLNSEEAKLFGVRLTMLSAFGCGIKNITICSEDKDLVCMLNNRDTKDWNMTPLAEDIFI 178
             +L    A+L+G+R  +L A   G   +   ++ + +V +L     KD  +TP A  +  
Sbjct: 1249 SFL----AELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLR----KDGPVTPDASILVK 1300

Query: 177  LWYLFDSCFFSIPDSRWMANCNRLALFALDGNVDSNW 67
               L    F  I  +  +   N+ A F  +    S+W
Sbjct: 1301 DCKLLLDHFQEIKVTHILREGNQCADFLANLGQSSSW 1337


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 67/277 (24%), Positives = 120/277 (43%), Gaps = 10/277 (3%)
 Frame = -3

Query: 867  MCGLHEESLEHLFFHCPRAKNTWKIAPVKWSHTSQENVNFRGWWQDVCSIKE-NSFAEDR 691
            +CG  +E+L+HLF  C  A+  W  A    +  +  +++   W +  CS ++ + +  + 
Sbjct: 1612 VCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGTNW 1671

Query: 690  IQLSVYLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGAPQTQS 511
              +  Y+LW LWK RN  VF     +  ++++R+  E  E   + + +           +
Sbjct: 1672 SLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKR------TGLQTA 1725

Query: 510  LPTSSTQNIPTVGSSFVAISAVMWDG-CKT-----GFGGWILNENMQNVRAWTT---TRN 358
              T    + P  G  F  +++   DG CK+       GG + NEN   V  +T    T N
Sbjct: 1726 FQTWVVWSPPAAG--FTKLNS---DGACKSHSHLASAGGLLRNENGLWVAGYTCNIGTAN 1780

Query: 357  DYLNSEEAKLFGVRLTMLSAFGCGIKNITICSEDKDLVCMLNNRDTKDWNMTPLAEDIFI 178
             +L    A+L+G+R  +L A   G   +   ++ + +V +L     KD  +TP A  +  
Sbjct: 1781 SFL----AELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLR----KDGPVTPDASILVK 1832

Query: 177  LWYLFDSCFFSIPDSRWMANCNRLALFALDGNVDSNW 67
               L    F  I  +  +   N+ A F  +    S+W
Sbjct: 1833 DCKLLLDHFQEIKVTHILREGNQCADFLANLGQSSSW 1869


>gb|ABK28206.1| unknown [Arabidopsis thaliana]
          Length = 293

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 14/288 (4%)
 Frame = -3

Query: 864 CGLHEESLEHLFFHCPRAKNTWKIAPV------KWSHTSQENVNFRGWWQDVCSIKENSF 703
           C    E++ HL F C  A+  W I+P+      +W+ +   N+    +W  V +++    
Sbjct: 15  CPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANL----YW--VLNLEVEIP 68

Query: 702 AEDRI-QLSVYLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGA 526
              +I  L  +LLW LWK+RN  +F+       E++ RA+ +++E++  +  +GKA    
Sbjct: 69  KLGKIGNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKA--SG 126

Query: 525 PQTQSLPTSSTQNIPTVGSSFVAISAVMWDGCKTGFGGWILNENMQNV-----RAWTTTR 361
           PQ +   +   +  P         +    +  + G  GWIL      V     RA   T+
Sbjct: 127 PQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGI-GWILRNESGGVLWMGARALPRTK 185

Query: 360 NDYLNSEEAKLFGVRLTMLSAFGCGIKNITICSEDKDLVCMLNNRDTKDW-NMTPLAEDI 184
           N      EA+L  +R  +L+      K I   S+ + LV +LN+ D   W  + P  EDI
Sbjct: 186 NVL----EAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDF--WPTLQPALEDI 239

Query: 183 FILWYLFDSCFFSIPDSRWMANCNRLALFALD-GNVDSNWSDQFPAWL 43
             L + F+   F           +R+A  ++   N D       P WL
Sbjct: 240 QQLLHHFEEVKFEFTPRGGNKVADRIARESISFSNYDPKLFSIVPQWL 287


>ref|NP_180979.1| polynucleotidyl transferase, ribonuclease H-like superfamily
           protein [Arabidopsis thaliana] gi|3337363|gb|AAC27408.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|91805481|gb|ABE65469.1|
           hypothetical protein At2g34320 [Arabidopsis thaliana]
           gi|330253864|gb|AEC08958.1| polynucleotidyl transferase,
           ribonuclease H-like superfamily protein [Arabidopsis
           thaliana]
          Length = 292

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 14/288 (4%)
 Frame = -3

Query: 864 CGLHEESLEHLFFHCPRAKNTWKIAPV------KWSHTSQENVNFRGWWQDVCSIKENSF 703
           C    E++ HL F C  A+  W I+P+      +W+ +   N+    +W  V +++    
Sbjct: 15  CPDSRETVNHLLFKCCFARLVWAISPIPAYPEGEWTDSLYANL----YW--VLNLEVEIP 68

Query: 702 AEDRI-QLSVYLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGA 526
              +I  L  +LLW LWK+RN  +F+       E++ RA+ +++E++  +  +GKA    
Sbjct: 69  KLGKIGNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKA--SG 126

Query: 525 PQTQSLPTSSTQNIPTVGSSFVAISAVMWDGCKTGFGGWILNENMQNV-----RAWTTTR 361
           PQ +   +   +  P         +    +  + G  GWIL      V     RA   T+
Sbjct: 127 PQVERNLSVQWKAPPYQWVKCNTDATWQLENPRCGI-GWILRNESGGVLWMGARALPRTK 185

Query: 360 NDYLNSEEAKLFGVRLTMLSAFGCGIKNITICSEDKDLVCMLNNRDTKDW-NMTPLAEDI 184
           N      EA+L  +R  +L+      K I   S+ + LV +LN+ D   W  + P  EDI
Sbjct: 186 NVL----EAELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDDF--WPTLQPALEDI 239

Query: 183 FILWYLFDSCFFSIPDSRWMANCNRLALFALD-GNVDSNWSDQFPAWL 43
             L + F+   F           +R+A  ++   N D       P WL
Sbjct: 240 QQLLHHFEEVKFEFTPRGGNKVADRIARESISFSNYDPKLFSIVPQWL 287


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 8/250 (3%)
 Frame = -3

Query: 864  CGLHEESLEHLFFHCPRAKNTWKIAPVKWSHTSQENVNFRGWWQD---VCSIKENSFAED 694
            CG  E SL HL   CP AK  W++APV ++ +   + +      D   + ++        
Sbjct: 1015 CGQTESSL-HLMLLCPYAKKVWELAPVLFNPSEATHSSVALLLVDAKRMVALPPTGLGS- 1072

Query: 693  RIQLSVYLLWWLWKTRNLWVFQKVFMSEKELVDRALAE---WQEFTVIKSSKGKAGYGAP 523
               L  +LLW LWK RN  +F     SE+ LV +A+ +   W E  ++           P
Sbjct: 1073 -APLYPWLLWHLWKARNRLIFDNHSCSEEGLVLKAILDARAWMEAQLL--------IHHP 1123

Query: 522  QTQSLPTSSTQNIPTVGSSFVAISAVMWDGCKTGFGGWILNENMQNVRAWTTTRNDYLNS 343
               S   S T N+  V S FV  +      C     GW L +  +       + + ++ S
Sbjct: 1124 SPISDYPSPTPNL-KVTSCFVDAAWTTSGYCGM---GWFLQDPYKVKIKENQSSSSFVGS 1179

Query: 342  E-EAKLFGVRLTMLSAFGCGIKNITICSEDKDLVCMLNNRDTKDWNMTPLAEDIFILWYL 166
               A+   V L ++ A   G++ + + S+ K+L+ +LN+       +  L  DI  L   
Sbjct: 1180 ALMAETLAVHLALVDALSTGVRQLNVFSDCKELISLLNS-GKSIVELRGLLHDIRELSVS 1238

Query: 165  FDS-CFFSIP 139
            F   CFF IP
Sbjct: 1239 FTHLCFFFIP 1248


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 10/277 (3%)
 Frame = -3

Query: 867  MCGLHEESLEHLFFHCPRAKNTWKIAPVKWSHTSQENVNFRGWWQDVCSIKE-NSFAEDR 691
            +CG  +E+L+HLF  C  A+  W  A    +  +  +++   W +  CS ++ + +  + 
Sbjct: 1080 VCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYGTNW 1139

Query: 690  IQLSVYLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGAPQTQS 511
              +  Y+LW LWK RN  VF     +  ++++R+  E  E   + + +           +
Sbjct: 1140 SLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKR------TGLQTA 1193

Query: 510  LPTSSTQNIPTVGSSFVAISAVMWDG-CKT-----GFGGWILNENMQNVRAWTT---TRN 358
              T    + P  G  F  +++   DG CK+       GG + NEN   V  +     T N
Sbjct: 1194 FQTWVVWSPPAAG--FTKLNS---DGACKSHSHLASAGGLLRNENGLWVAGYICNIGTAN 1248

Query: 357  DYLNSEEAKLFGVRLTMLSAFGCGIKNITICSEDKDLVCMLNNRDTKDWNMTPLAEDIFI 178
             +L    A+L+G+R  +L A   G   +   ++ + +V +L     KD  +TP A  +  
Sbjct: 1249 SFL----AELWGLREGLLLAKNRGFTKLIAETDSEAVVQVLR----KDGPVTPDASILVK 1300

Query: 177  LWYLFDSCFFSIPDSRWMANCNRLALFALDGNVDSNW 67
               L    F  I  +  +   N+ A F  +    S+W
Sbjct: 1301 DCKLLLDHFQEIKVTHILREGNQCADFLANLGQSSSW 1337


>gb|EMJ04273.1| hypothetical protein PRUPE_ppa023544mg, partial [Prunus persica]
          Length = 394

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 74/287 (25%), Positives = 116/287 (40%), Gaps = 11/287 (3%)
 Frame = -3

Query: 867 MCGLHEESLEHLFFHCPRAKNTWKIAPVKWSHTSQENVNFRGWWQDVCSIKENSFAEDRI 688
           +C  +EES EH  F CP  +  W  +P+ +    Q    F  W+  + + +  S +E   
Sbjct: 121 ICNQYEESEEHAIFLCPWTQAVWFGSPLNYRVNPQSITTFDRWFTGLLNSQMFSKSERVW 180

Query: 687 QLSV--YLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGAPQTQ 514
            LS+  ++ W +WK R              +V+RA +  +EF V++        GA    
Sbjct: 181 VLSLVSFISWEIWKARC-------------VVERATSAAEEFDVLRRHAISTRNGA-GVF 226

Query: 513 SLPTSSTQNIPTVGSSFVAISAVMWDGCKTGFGGWILNENMQNVRAWTTTR--NDYLNSE 340
           S PT   +  P V  +        W   + G G  + N N      + + R  N  LN+E
Sbjct: 227 SQPTDIWK--PPVNGAIKVNFDAAWKNHEAGLGVVMRNHNKDFCYGFASKRCCNSALNAE 284

Query: 339 -EAKLFGVRLTMLSAFGCGIKNITICSEDKDLVCML-NNRDTKDWNMTPLAEDIFILWYL 166
            EA +  +R   L     G   I + S+ K L+  +  N  TK W + PL ++I  L   
Sbjct: 285 TEAAIEALRCASLR----GYSKIEMESDSKVLIDNIKGNVCTKAWTILPLLDEIRRL--- 337

Query: 165 FDSCFFSIPDSRWM-ANCNR----LALFALDGNVDSNWSDQFPAWLI 40
             S  FS  +  W+    NR     A   L       W++Q P  L+
Sbjct: 338 --SARFSDVEWCWIPRGANRAAHVTAAIGLRAVCPQGWANQPPPSLV 382


>ref|XP_003562103.1| PREDICTED: uncharacterized protein LOC100844438 [Brachypodium
            distachyon]
          Length = 2492

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
 Frame = -3

Query: 867  MCGLHEESLEHLFFHCPRAKNTWKIAPVKWSHT---SQENVNFRGWWQDVCSIKENSFAE 697
            +C   +E   HL  HC  AK  W  + VKW      +  + + R WW+ + S  +++  +
Sbjct: 2028 LCDQVQEGAAHLMIHCVFAKEVWHASSVKWPRVGAVAAASPSLRTWWRQIISGPKSASKD 2087

Query: 696  DRIQLSVYLLWWLWKTRNLWVFQKVFMSEKEL 601
              I ++  + W LWK RN  VFQ+  M+   L
Sbjct: 2088 KEIAMAALIAWHLWKERNSRVFQQKEMNAAAL 2119


>ref|NP_189164.1| ribonuclease H-like protein [Arabidopsis thaliana]
           gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
           protein [Arabidopsis thaliana]
           gi|332643482|gb|AEE77003.1| ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 13/225 (5%)
 Frame = -3

Query: 864 CGLHEESLEHLFFHCPRAKNTWKIAPVKWSHTSQENVNFRGWWQDVCSIKENSFAEDRIQ 685
           C   +E+ +HLFF C  A+  W+ + +         +      + + S    +       
Sbjct: 59  CCQEDETSQHLFFDCFYAQQVWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFN 118

Query: 684 LSVYLLWWLWKTRNLWVFQKVFMSEKELVDRA---LAEWQEF-TVIKSSKGKAGYGAPQT 517
           L++++LW LWK+RN  VFQ+  +S +  + RA   + EW++  T ++S   +      Q 
Sbjct: 119 LAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQ 178

Query: 516 QSLPTSSTQNIPTVGSSFVAISAVMWDGC-----KTGFGGWILNEN----MQNVRAWTTT 364
            ++  +  Q  P+    +       +DG      +    GW++ +     M + +A  +T
Sbjct: 179 PTMARTKWQRPPSTWIKY------NYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGST 232

Query: 363 RNDYLNSEEAKLFGVRLTMLSAFGCGIKNITICSEDKDLVCMLNN 229
            +D L SE   L    + M  A+  G + +    + K +  ++NN
Sbjct: 233 TSDSLESEFQALI---IAMQHAWSQGYRKVIFEGDSKQVEELMNN 274


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis
            thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1|
            reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
 Frame = -3

Query: 867  MCGLHEESLEHLFFHCPRAKNTWKIAPVKWSHTSQENVNFRGWWQDVCSIKENSFAEDRI 688
            +CG   ES+ H+ F C  A+  W ++ V  S    +N +     Q +  +K      ++I
Sbjct: 1088 VCGEEGESINHVLFTCSLARQVWALSGVPTSQFGFQNSSIFANIQYLLELKGKGLIPEQI 1147

Query: 687  QLS-VYLLWWLWKTRNLWVFQKVFMSEKELVDRALAEWQEFTVIKSSKGKAGYGAPQTQS 511
            + S  ++LW LWK R+   F+    S  + +++   + QE+ + ++       G     S
Sbjct: 1148 KKSWPWVLWRLWKNRDKLFFEGTIFSPLKSIEKIRDDVQEWFLAQALVASVDAG-ETVCS 1206

Query: 510  LPTSSTQNIPTVGSSFVAISAVMWDGCKTGFGG-WILNEN 394
             P  S+   P +G     IS V W G K   GG W+L ++
Sbjct: 1207 APCPSSWEPPPLGWVKCNISGV-WSGKKRVCGGAWVLRDD 1245