BLASTX nr result
ID: Rehmannia25_contig00024278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00024278
(473 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006485550.1| PREDICTED: uncharacterized protein LOC102627... 69 6e-10
gb|EPS61484.1| hypothetical protein M569_13313 [Genlisea aurea] 69 6e-10
gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea] 66 4e-09
gb|EPS70147.1| hypothetical protein M569_04615, partial [Genlise... 65 1e-08
gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea] 64 2e-08
ref|XP_006471307.1| PREDICTED: uncharacterized protein LOC102611... 64 2e-08
gb|EPS65078.1| hypothetical protein M569_09701, partial [Genlise... 63 3e-08
gb|EPS59688.1| hypothetical protein M569_15116, partial [Genlise... 63 3e-08
gb|EPS60814.1| hypothetical protein M569_13987, partial [Genlise... 62 8e-08
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 8e-08
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 62 1e-07
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 62 1e-07
gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlise... 61 2e-07
gb|EPS71506.1| hypothetical protein M569_03261 [Genlisea aurea] 61 2e-07
gb|EPS58553.1| hypothetical protein M569_16261, partial [Genlise... 61 2e-07
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 61 2e-07
gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus pe... 60 3e-07
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi... 60 3e-07
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 60 3e-07
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 60 4e-07
>ref|XP_006485550.1| PREDICTED: uncharacterized protein LOC102627687 [Citrus sinensis]
Length = 473
Score = 68.9 bits (167), Expect = 6e-10
Identities = 43/119 (36%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = +3
Query: 39 RLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPFRFEAMW 218
RLD G+ + W LF KV S + SDH LHI F +P K FRFE +W
Sbjct: 196 RLDHGLASINWIRLFPQAKVSSLKASCSDH--LHIFFDPNPL---VYQSRVKKFRFENLW 250
Query: 219 IRSKECENIIRKNW-DMDRLDIDDKIEQCIIGLLRWSKSNFEDIDKKIADIKTEISRLR 392
+ +C+ I++ +W + I KI C LLRW D K+I D K I LR
Sbjct: 251 LCEPDCQPIVQDSWASSGNVSIQSKINACGSDLLRWGSYLSRDFHKRIRDCKQRIGVLR 309
>gb|EPS61484.1| hypothetical protein M569_13313 [Genlisea aurea]
Length = 793
Score = 68.9 bits (167), Expect = 6e-10
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Frame = +3
Query: 18 HPFTQRARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKP 197
HP T RARLDR + + W L+ +++ S SDH L + F+ N+ + P
Sbjct: 609 HPHTVRARLDRALASVNWLQLYPMSEIQHLSFGGSDHAPLWVQFTTPIPPNYVRRP--HR 666
Query: 198 FRFEAMWIRSKECENIIRKNWDMDR---LDIDDKIEQCIIGLLRWSKSNFEDIDKKIADI 368
FRFEA W+ CE+ IR W + R + ++ I LL+W + + I +
Sbjct: 667 FRFEARWMSLSGCESAIRDAWSLSRDPSTRLQSRLSATRISLLKWYQHQIGPLKANIKRV 726
Query: 369 KTEISRLRNTLITPT----VKNVLSQLNSQLD 452
+ E++ L + + KN+ ++L+ +L+
Sbjct: 727 EAELATLAVATLDDSSLAREKNLRNELDDRLE 758
>gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]
Length = 1469
Score = 66.2 bits (160), Expect = 4e-09
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Frame = +3
Query: 21 PFTQRARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPF 200
P T RARLDR + W +LF V+ SSDH L I P + P + F
Sbjct: 557 PDTVRARLDRAVATTTWNNLFPRAIVKHLPYGSSDHLPLLIFLD--PAAPTSIRPNKRRF 614
Query: 201 RFEAMWIRSKECENIIRKNW--DMDRLDIDDKIEQCIIGLLRWSKSNFEDIDKKIADIKT 374
+FEA W C ++I ++W + + + +I++ + LL+W +S I ++ I T
Sbjct: 615 KFEAFWTTIPGCADVIHQSWAPNSQPTNFNYRIQKTRMSLLKWYQSKVGPIKSRLQKIAT 674
Query: 375 EISRLRNTLITPTVKNVLSQLNSQLDTL 458
E+ L IT +K+ S L + +L
Sbjct: 675 ELDLLARQSITDDIKHCESALKEEQASL 702
>gb|EPS70147.1| hypothetical protein M569_04615, partial [Genlisea aurea]
Length = 395
Score = 64.7 bits (156), Expect = 1e-08
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Frame = +3
Query: 21 PFTQRARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPF 200
P T RARLDR + W L+ V+ SSDH L + P + P + F
Sbjct: 60 PDTVRARLDRAVATKEWSHLYPRAIVKHLPHGSSDHLPLLVVVD--PIIPVSPRPTKRRF 117
Query: 201 RFEAMWIRSKECENIIRKNWDMDRL--DIDDKIEQCIIGLLRWSKSNFEDIDKKIADIKT 374
RFEA W CEN+++++W + + +I + LL+W ++ I ++ I
Sbjct: 118 RFEAFWTTIPGCENVVKQSWSSSYIPDSLTRRIWTTRVSLLKWYQAKVGPIKARLIRISQ 177
Query: 375 EISRLRNTLITPTVKNVLSQLNSQLDTL 458
E+ L IT V++ +L ++ ++L
Sbjct: 178 ELDELSRLPITDAVQSSEIRLKAEQESL 205
>gb|EPS61425.1| hypothetical protein M569_13371 [Genlisea aurea]
Length = 1255
Score = 64.3 bits (155), Expect = 2e-08
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 2/148 (1%)
Frame = +3
Query: 21 PFTQRARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPF 200
P T RARLDR I W L+ V+ S SSDH L I P + P K F
Sbjct: 77 PDTVRARLDRAIATQPWSQLYPKAVVKHLSHGSSDH--LPILIVLDPNTLPSSRPLRKRF 134
Query: 201 RFEAMWIRSKECENIIRKNWDMDRL--DIDDKIEQCIIGLLRWSKSNFEDIDKKIADIKT 374
RFEA W CE +I++ W + ++ +I+ I LL+W + I ++ +
Sbjct: 135 RFEAFWASIPGCEEVIKQTWPLPHTPDTLNRRIQNTRISLLKWYQDKVGPIKTRLRRLAQ 194
Query: 375 EISRLRNTLITPTVKNVLSQLNSQLDTL 458
E+ L IT + L + ++L
Sbjct: 195 ELDALSKLSITDATQASERHLKDEQESL 222
>ref|XP_006471307.1| PREDICTED: uncharacterized protein LOC102611747 [Citrus sinensis]
Length = 323
Score = 63.9 bits (154), Expect = 2e-08
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Frame = +3
Query: 39 RLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPFRFEAMW 218
RLDR + LW S F+ +V S S +SDH L I P + + K FRFE MW
Sbjct: 93 RLDRVLATDLWISRFKEAQVWSLESSTSDH--LPIFIDPKPLAHSRRL---KRFRFENMW 147
Query: 219 IRSKECENIIRKNWDMDR-LDIDDKIEQCIIGLLRWSKSNFEDIDKKIADIKTEISRLR 392
+R C ++R +W R I KI +C LLRW +D I++ + ++ LR
Sbjct: 148 LREANCAEVVRSSWSSSRGYLIQQKILECGSALLRWGGHLAQDFRNHISECRRRMTLLR 206
>gb|EPS65078.1| hypothetical protein M569_09701, partial [Genlisea aurea]
Length = 314
Score = 63.2 bits (152), Expect = 3e-08
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Frame = +3
Query: 21 PFTQRARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKN-PAGKP 197
P T RARLDR + + W LF V S SDH+ + I + F+ + P +
Sbjct: 24 PATVRARLDRALSSDSWNILFPNATVRHLSFGGSDHSPILI---QKDFQGSLGHVPRSRR 80
Query: 198 FRFEAMWIRSKECENIIRKNWDM---DRLDIDDKIEQCIIGLLRWSKSNFEDIDKKIADI 368
FRFEA W CE IR+ W M + + ++ + I LL+W K + I I
Sbjct: 81 FRFEAYWAEIPGCEESIREGWTMVHRRQSPMIGRLGRTRISLLKWQKRTLGSVKAAINRI 140
Query: 369 KTEISRLRNTLITPTVKNVLSQLNSQLDTLQSLAD 473
+ EI+ L +I+ + N L +L++L L +
Sbjct: 141 EDEIALLAQEVISESNWNREKDLKVELNSLLKLEE 175
>gb|EPS59688.1| hypothetical protein M569_15116, partial [Genlisea aurea]
Length = 239
Score = 63.2 bits (152), Expect = 3e-08
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Frame = +3
Query: 21 PFTQRARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPF 200
P T RARLDR + W S+F + V + S SDH+ L + +S + ++ P+ + F
Sbjct: 62 PDTVRARLDRAVATESWISMFPEFSVSNLSFGGSDHSPLLVEWSSR--QEPSRRPSRRRF 119
Query: 201 RFEAMWIRSKECENIIRKNWDMDRLDID----DKIEQCIIGLLRWSKSNFEDIDKKIADI 368
RFEA W C ++I +W L +I + + LL W + + +++A I
Sbjct: 120 RFEAHWSDIPGCTDVIANSWGAPELTRHYGCLPRIRRMRVNLLIWYQKMVGPLKRRLARI 179
Query: 369 KTEISRLRNTLITPTVKNVLSQLNSQLDTL 458
++++ L +T + + S L + + L
Sbjct: 180 TSDLAELYLLPVTDSSREQESMLKKEQEAL 209
>gb|EPS60814.1| hypothetical protein M569_13987, partial [Genlisea aurea]
Length = 396
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Frame = +3
Query: 18 HPFTQRARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKP 197
+P T RARLDR + ++ W LF ++ SDH + I +H N T+ +
Sbjct: 60 YPDTVRARLDRAVSSYSWWQLFPNAIIKHLPFGGSDHAPILILCKQH---NTTRIRKKRH 116
Query: 198 FRFEAMWIRSKECENIIRKNW---DMDRLDIDDKIEQCIIGLLRWSKSNFEDIDKKIADI 368
F+FEA WI +CE+ IR W + + + ++ L+ W++ + I I
Sbjct: 117 FKFEARWIELPDCEDTIRNGWQRLSRNNVPLSWRLSATRASLITWNRQGIHHLKTSIQKI 176
Query: 369 KTEISRLRNTLITPTVKNVLSQLNSQLDTL 458
+ E+ L IT + +L L +L
Sbjct: 177 EAELEALTTGTITHDSRERERELRQTLFSL 206
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 62.0 bits (149), Expect = 8e-08
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 6/150 (4%)
Frame = +3
Query: 33 RARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPFR--F 206
R RLDR +C++ W L+ E + SDH+ + + R P GK R F
Sbjct: 192 RERLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVLRSQR------AGRPRGKTRRLHF 245
Query: 207 EAMWIRSKECENIIRKNWDMDRLDIDD----KIEQCIIGLLRWSKSNFEDIDKKIADIKT 374
E W+ ECE ++R++W+ ++ + QC L+RWS F+++ K+I +
Sbjct: 246 ETSWLLDDECEAVVRESWENSEGEVMTGRVASMGQC---LVRWSTKKFKNLSKQIETAEK 302
Query: 375 EISRLRNTLITPTVKNVLSQLNSQLDTLQS 464
+S +N I+ + L +LD L +
Sbjct: 303 ALSVAQNNPISESACQECVLLEKKLDELHA 332
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Frame = +3
Query: 33 RARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKN--PAGKPFRF 206
+ RLDR + N + F VE+ + SSDH + I SR RN + P + FRF
Sbjct: 198 KVRLDRAVANGEFSRYFEDCLVENVITTSSDHYAISIDLSR---RNHGQRRIPIQQGFRF 254
Query: 207 EAMWIRSKECENIIRKNWDMDRL------DIDDKIEQCIIGLLRWSKSNFEDIDKKIADI 368
EA W+R+++ ++ +W + + ++Q + L WSK++F + +KI +
Sbjct: 255 EAAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQVAVSLKDWSKASFGSVRRKILKM 314
Query: 369 KTEISRLRNTLITPTVKNVLSQLNSQL 449
+ ++ LR + + V + QL
Sbjct: 315 ERKLKSLRQSPVNDVVIQEEKLIEQQL 341
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Frame = +3
Query: 33 RARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKN--PAGKPFRF 206
+ RLDR + N + F VE+ + SSDH + I SR RN + P + FRF
Sbjct: 155 KVRLDRAVANGEFSRYFEDCLVENVITTSSDHYAISIDLSR---RNHGQRRIPIQQGFRF 211
Query: 207 EAMWIRSKECENIIRKNWDMDRL------DIDDKIEQCIIGLLRWSKSNFEDIDKKIADI 368
EA W+R+++ ++ +W + + ++Q + L WSK++F + +KI +
Sbjct: 212 EAAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQVAVSLKDWSKASFGSVRRKILKM 271
Query: 369 KTEISRLRNTLITPTVKNVLSQLNSQL 449
+ ++ LR + + V + QL
Sbjct: 272 ERKLKSLRQSPVNDVVIQEEKLIEQQL 298
>gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlisea aurea]
Length = 1651
Score = 60.8 bits (146), Expect = 2e-07
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +3
Query: 18 HPFTQRARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKP 197
+P T ARLDRG + W L+ SDH + + H +NP +
Sbjct: 528 NPQTVYARLDRGTASGQWLRLYPSTTTYHLPFGGSDHAPILVRCLPHSPAADHRNP--RR 585
Query: 198 FRFEAMWIRSKECENIIRKNWDMDR---LDIDDKIEQCIIGLLRWSKSNFEDIDKKIADI 368
FRFEA W+ CE IR W R + ++ I LL+W + + +I +
Sbjct: 586 FRFEARWMSIPGCETTIRDAWTSSRGPPSTLQPRLSHTRISLLKWHQHQIGPLKAQIKRV 645
Query: 369 KTEISRLRNTLITPTVKNVLSQLNSQLDTL 458
+TE++ + +T +QL S+LD L
Sbjct: 646 ETELAAIATATLTDISIAQETQLRSELDGL 675
>gb|EPS71506.1| hypothetical protein M569_03261 [Genlisea aurea]
Length = 793
Score = 60.8 bits (146), Expect = 2e-07
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Frame = +3
Query: 18 HPFTQRARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKP 197
+P T RARLDR + + W LF V SDH + I R+ T+ K
Sbjct: 542 YPDTVRARLDRAVSSFSWWQLFPNAVVHHLPFGGSDHAPIMILCDN---RDTTRAERTKQ 598
Query: 198 -FRFEAMWIRSKECENIIRKNW---DMDRLDIDDKIEQCIIGLLRWSKSNFEDIDKKIAD 365
F+FEA W+ +CE +R W +++ + ++ + L+RW++ + I +
Sbjct: 599 RFKFEARWLELPDCEETVRNGWHRLSPNQVPLYRRLSTTRLSLIRWNRQGIHQLKASIRE 658
Query: 366 IKTEISRLRNTLITPTVKNVLSQLNSQLDTL 458
I+ E+ L + IT K ++L L +L
Sbjct: 659 IEVELETLLSRNITQNSKERETELRRTLFSL 689
>gb|EPS58553.1| hypothetical protein M569_16261, partial [Genlisea aurea]
Length = 398
Score = 60.8 bits (146), Expect = 2e-07
Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Frame = +3
Query: 18 HPFTQRARLDRGICNHLWRSLFRYWKVESCSSFSSDHT----ILHIHFSRHPFRNFTKNP 185
HP T +ARLDR + N W +LF + V SDH+ L I S P R +
Sbjct: 56 HPSTVKARLDRFVANQNWTALFPDFSVLHLKFGGSDHSPILLQLTIPSSSQPNRRWRPR- 114
Query: 186 AGKPFRFEAMWIRSKECENIIRKNWDMDRLDIDD------KIEQCIIGLLRWSKSNFEDI 347
F+FE +W + C++IIR W R + +++ C L W ++ F +
Sbjct: 115 --NFFKFERIWCGKEPCKDIIRDCWATPRSSLCPQASFLRRLQTCRQKLQGWHRATFGSL 172
Query: 348 DKKIADIKTEISRLRNTLITPTVKNVLSQLNSQLDTLQSL 467
KI ++ +IS L I+ V L L +QL L L
Sbjct: 173 KAKIKIVQDQISELMAGHISNEVGLHLKDLKAQLKELWRL 212
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 60.8 bits (146), Expect = 2e-07
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Frame = +3
Query: 33 RARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPFRFEA 212
R RLDR + W++LF + V+ SDH + + RH ++ + F FEA
Sbjct: 604 RVRLDRALATTSWQNLFPGFSVQHLDPSRSDHLPILVRI-RHATCQKSRY---RRFHFEA 659
Query: 213 MWIRSKECENIIRKNWD-MDRLD----IDDKIEQCIIGLLRWSKSNFEDIDKKIADIKTE 377
MW +CE I++ W+ + LD +D KI+Q L RWSKS F I ++ ++ +
Sbjct: 660 MWTTHVDCEKTIKQVWESVGNLDPMVGLDKKIKQMTWVLQRWSKSTFGHIKEETRVLRAK 719
Query: 378 ISRLRNTLITPTVKNVLSQLNSQLDTL 458
++ L + V+ + LD L
Sbjct: 720 LASLFQAPYSERVEEDRRVVQKSLDEL 746
>gb|EMJ18520.1| hypothetical protein PRUPE_ppa019733mg [Prunus persica]
Length = 1275
Score = 60.1 bits (144), Expect = 3e-07
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Frame = +3
Query: 33 RARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPFRFEA 212
R RLDR + W++LF + V+ SDH + + RH ++ F FEA
Sbjct: 150 RVRLDRALATTSWQNLFPGFSVQHLDPSRSDHLPILVRI-RHATCQKSRYHR---FHFEA 205
Query: 213 MWIRSKECENIIRKNW----DMD-RLDIDDKIEQCIIGLLRWSKSNFEDIDKKIADIKTE 377
MW +CE I++ W D+D + +D KI+Q L RWSKS F I ++ ++ +
Sbjct: 206 MWTTHVDCEKTIKQVWESVGDLDPMVGLDKKIKQMTWVLQRWSKSTFGHIKEETRVLRAK 265
Query: 378 ISRLRNTLITPTVKNVLSQLNSQLDTL 458
++ L + V+ + LD L
Sbjct: 266 LASLFQAPYSERVEEDRRVVQKSLDEL 292
>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Frame = +3
Query: 33 RARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPFRFEA 212
+ RLDRG+ + W S F + ++ SSDH L + T K R+E
Sbjct: 148 KVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREET-----TLARPMKIMRYEE 202
Query: 213 MWIRSKECENIIRKNWDMDRL-----DIDDKIEQCIIGLLRWSKSNFEDIDKKIADIKTE 377
+W R +I++ W M DI+DK++ + L+ WSK ++ KKI D++ +
Sbjct: 203 VWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREK 262
Query: 378 ISRLRNTLITPTVKNVLS 431
+ LRN + T V S
Sbjct: 263 LGELRNIGLLDTDNEVHS 280
>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 60.1 bits (144), Expect = 3e-07
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Frame = +3
Query: 33 RARLDRGICNHLWRSLFRYWKVESCSSFSSDHTILHIHFSRHPFRNFTKNPAGKPFRFEA 212
+ RLDRG+ + W S F + ++ SSDH L + T K R+E
Sbjct: 173 KVRLDRGVASPAWSSRFPQAVITHLTTPSSDHAPLLLEREET-----TLARPMKIMRYEE 227
Query: 213 MWIRSKECENIIRKNWDMDRL-----DIDDKIEQCIIGLLRWSKSNFEDIDKKIADIKTE 377
+W R +I++ W M DI+DK++ + L+ WSK ++ KKI D++ +
Sbjct: 228 VWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREK 287
Query: 378 ISRLRNTLITPTVKNVLS 431
+ LRN + T V S
Sbjct: 288 LGELRNIGLLDTDNEVHS 305
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 59.7 bits (143), Expect = 4e-07
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Frame = +3
Query: 33 RARLDRGICNHLWRSLFRYWKVESCS---SFSSDHTILHIHFSRHPFRNFTKNPAGKP-F 200
+ RLDRG N +L + W SC S SSDH L F P + N K F
Sbjct: 476 KERLDRGFGN---LALIQQWGGISCHHLVSMSSDHCPLL--FENDPPMSRGGNWRRKRRF 530
Query: 201 RFEAMWIRSKECENIIRKNWDMDRLDIDDKIEQCIIGLLRWSKSNFEDIDKKIADIKTEI 380
FE MW+ + C ++ + W + K+EQ GL RW++ F + KK+A ++ E+
Sbjct: 531 LFEDMWLTHEGCRGVVERQWLFGVNSVVGKLEQVAGGLKRWNQETFGSVKKKVASLREEL 590
Query: 381 SRLRNTLITPTVKNVLSQLN 440
L+ P N++ + N
Sbjct: 591 DVLQR---QPPTSNIICKRN 607