BLASTX nr result

ID: Rehmannia25_contig00024227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00024227
         (771 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280381.2| PREDICTED: F-box protein At2g16365-like [Vit...    62   2e-07
emb|CBI37672.3| unnamed protein product [Vitis vinifera]               62   2e-07
ref|XP_004289661.1| PREDICTED: F-box protein At2g16365-like [Fra...    62   3e-07
ref|XP_002512923.1| hypothetical protein RCOM_1447500 [Ricinus c...    60   8e-07

>ref|XP_002280381.2| PREDICTED: F-box protein At2g16365-like [Vitis vinifera]
          Length = 583

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = +3

Query: 528 VTSSKEVKYQPPNIKLSDINLEVPALPGKASSSENLCHSPSKTQSLETDKLLVHFEQP-K 704
           V  ++E + + PN  L D+N E+PALP  ASS ++   S S+TQS + D +L H E+P  
Sbjct: 339 VAPAREFRGRLPNSDLPDMNQELPALPAPASSMDDKEASTSRTQSFDVDHILAHAEEPIH 398

Query: 705 PKSNCSLDYCPNEDPGDRWVKR 770
            KS+   D     DP  RWVKR
Sbjct: 399 SKSSPYPDVSLEVDPSSRWVKR 420


>emb|CBI37672.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = +3

Query: 528 VTSSKEVKYQPPNIKLSDINLEVPALPGKASSSENLCHSPSKTQSLETDKLLVHFEQP-K 704
           V  ++E + + PN  L D+N E+PALP  ASS ++   S S+TQS + D +L H E+P  
Sbjct: 162 VAPAREFRGRLPNSDLPDMNQELPALPAPASSMDDKEASTSRTQSFDVDHILAHAEEPIH 221

Query: 705 PKSNCSLDYCPNEDPGDRWVKR 770
            KS+   D     DP  RWVKR
Sbjct: 222 SKSSPYPDVSLEVDPSSRWVKR 243


>ref|XP_004289661.1| PREDICTED: F-box protein At2g16365-like [Fragaria vesca subsp.
           vesca]
          Length = 447

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
 Frame = +3

Query: 375 ESSSHMVSYKFDLEKYAFNKGINISFSAVGSYSAASTKAFNMESNSPPWINVTSSKEVKY 554
           ESSS   +   D+ ++  N  + +  S    ++    K+   +S        ++ +EV+ 
Sbjct: 158 ESSSETDTMDMDVFQFQDNFLLGLGSSPTNEHTQGGQKSPTSQSAF-----TSAREEVRG 212

Query: 555 QPPNIKLSDINLEVPALPGKASSSENLCHSPSKTQSLETDKLLVHFEQP-KPKSNCSLDY 731
           + P  KL D+N E+P L G AS ++    S S+TQSL+ + LL H EQP   KS+ S D 
Sbjct: 213 RRPFTKLPDMNEELPELAGYASLADERETSTSRTQSLDVEHLLSHAEQPTNSKSSRSEDG 272

Query: 732 CPNEDPGDRWVKR 770
               DP  RWVKR
Sbjct: 273 PQGLDPNFRWVKR 285


>ref|XP_002512923.1| hypothetical protein RCOM_1447500 [Ricinus communis]
           gi|223547934|gb|EEF49426.1| hypothetical protein
           RCOM_1447500 [Ricinus communis]
          Length = 718

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +3

Query: 561 PNIKLSDINLEVPALPGKASSSENLCHSPSKTQSLETDKLLVHFEQPKPK-SNCSLDYCP 737
           PNI+L DIN EV A+PG  SS+++   S S+TQSL  ++ L H E P    S+ S+D   
Sbjct: 486 PNIELPDINQEVTAIPGVTSSADDGEASTSRTQSLNVEQFLSHVEDPTNSISSASVDIQL 545

Query: 738 NEDPGDRWVKR 770
             DP  RWVKR
Sbjct: 546 GLDPYSRWVKR 556


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