BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00023961
         (787 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   377   e-102
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     368   1e-99
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    367   2e-99
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     366   4e-99
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    365   9e-99
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   364   2e-98
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   362   1e-97
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   356   6e-96
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   348   2e-93
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]       347   3e-93
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   345   1e-92
gb|EPS62146.1| hypothetical protein M569_12646, partial [Genlise...   344   2e-92
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...   337   4e-90
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   336   5e-90
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   335   1e-89
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   332   7e-89
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   332   1e-88
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   330   4e-88
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...   325   8e-87
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   323   4e-86

>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  377 bits (967), Expect = e-102
 Identities = 178/257 (69%), Positives = 213/257 (82%)
 Frame = +3

Query: 12  IDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHL 191
           IDT  I+R +DY+KVEPHAFVHF    +AT ALDAAG+ EL L GKPLKVSLGPE P HL
Sbjct: 61  IDTAKIERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFHL 120

Query: 192 NEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAF 371
           N++RRTT P+K  DV +E+G++ SR+E+  GWRGP +GVDFLVDPF+G CK  FTKDTAF
Sbjct: 121 NQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTAF 180

Query: 372 SFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKES 551
           SFKG  K AVIKCNF++EFL REI E++  RD  SLI+LLQL+SSP +YYRTADDDI+E+
Sbjct: 181 SFKGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEET 240

Query: 552 VPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYES 731
           VPFDLLDDDDPWIRTTDFT SGAIGRCN+YRIS+ PRYG  L KA++YLR RRV V+ +S
Sbjct: 241 VPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVLEDS 300

Query: 732 PRHRLLVQDEPDFGMPM 782
           P+ +L V+DEPDFG+PM
Sbjct: 301 PKWQLRVRDEPDFGLPM 317


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  368 bits (944), Expect = 1e-99
 Identities = 179/259 (69%), Positives = 210/259 (81%)
 Frame = +3

Query: 6   YEIDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPH 185
           Y+ID E +QR ++YEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+
Sbjct: 58  YDIDAEKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPY 117

Query: 186 HLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDT 365
            LN++RRTT+P+K SDV VE+GV+ S+++FVVGWRGPRTGVDFLVDPFNG CK+ FTKDT
Sbjct: 118 RLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDT 177

Query: 366 AFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIK 545
           AFSF+GE + A+IKCNF+IEFL REI EIK  +DF SL++L QLASSPL++YRTADDDI+
Sbjct: 178 AFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIE 237

Query: 546 ESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIY 725
           ESV FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y   RRVP++ 
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVE 297

Query: 726 ESPRHRLLVQDEPDFGMPM 782
              R  L V+DEPDFG+ M
Sbjct: 298 MCNRKMLRVKDEPDFGVSM 316


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  367 bits (942), Expect = 2e-99
 Identities = 179/259 (69%), Positives = 208/259 (80%)
 Frame = +3

Query: 6   YEIDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPH 185
           Y+ID E + R  DYEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+
Sbjct: 58  YDIDAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPY 117

Query: 186 HLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDT 365
            LN++RRTT+P+K SDV VE+GV+ S+++FVVGWRGPRTGVDFLVDPFNG CK+ FTKDT
Sbjct: 118 RLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDT 177

Query: 366 AFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIK 545
           AFSF+GE + A+IKCNF+IEFL REI EIK  +DF SL++L QLASSPL++YRTADDDI+
Sbjct: 178 AFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIE 237

Query: 546 ESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIY 725
           ESV FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y   RRVP++ 
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVE 297

Query: 726 ESPRHRLLVQDEPDFGMPM 782
              R  L V+DEPDFG+ M
Sbjct: 298 MCNRKMLRVKDEPDFGVSM 316


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  366 bits (940), Expect = 4e-99
 Identities = 177/259 (68%), Positives = 209/259 (80%)
 Frame = +3

Query: 6   YEIDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPH 185
           +++D E +QR  DYEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+
Sbjct: 58  FDVDAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPY 117

Query: 186 HLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDT 365
            LN++RRTT+P+K SDV +E+GV+ S+++FVVGWRGPRTGVDFLVDPFNG CK+ FTKDT
Sbjct: 118 RLNQRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDT 177

Query: 366 AFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIK 545
           AFSF+GE + A+IKCNF+IEFL REI EIK  +DF SL++LLQLASSPL++YRTADDDI+
Sbjct: 178 AFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIE 237

Query: 546 ESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIY 725
           ESV FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y    RVP++ 
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVE 297

Query: 726 ESPRHRLLVQDEPDFGMPM 782
              R  L V+DEPDFG+ M
Sbjct: 298 MCNRKMLRVRDEPDFGVSM 316


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  365 bits (937), Expect = 9e-99
 Identities = 177/259 (68%), Positives = 209/259 (80%)
 Frame = +3

Query: 6   YEIDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPH 185
           Y+ID E +QR ++YEKV PHAFVHFA   SA  AL AAG  ELIL  KPL VSLGPENP+
Sbjct: 58  YDIDAEKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPY 117

Query: 186 HLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDT 365
            LN++RRTT+P+K SDV VE+GV+ S+++FVVGWRGPRTGVDF VDPFNG CK+ FTKDT
Sbjct: 118 RLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGTCKILFTKDT 177

Query: 366 AFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIK 545
           AFSF+GE + A+IKCNF+IEF+ REI EIK  +DF SL++LLQLASSPL++YRTADDDI+
Sbjct: 178 AFSFRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIE 237

Query: 546 ESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIY 725
           ESV FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y    RVP++ 
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVE 297

Query: 726 ESPRHRLLVQDEPDFGMPM 782
              R  L V+DEPDFG+ M
Sbjct: 298 MCNRKMLRVKDEPDFGVSM 316


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  364 bits (935), Expect = 2e-98
 Identities = 177/259 (68%), Positives = 208/259 (80%)
 Frame = +3

Query: 6   YEIDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPH 185
           Y+ID E +QR ++YEKV PHAFVHFA   SA  AL AAG  EL+L  KPL VSLGPENP+
Sbjct: 58  YDIDAERVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELVLGKKPLIVSLGPENPY 117

Query: 186 HLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDT 365
            LN++RRTT+P+K SDV VE+GV+ S+ +FVVGWRGPRTGVDFLVDPFNG CK+ FTKDT
Sbjct: 118 RLNQRRRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDT 177

Query: 366 AFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIK 545
            FSF+GE + A+IKCNF+IEFL REI EIK  +DF SL++LLQLASSPL++YRTADDDI+
Sbjct: 178 VFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFMSLVILLQLASSPLVFYRTADDDIE 237

Query: 546 ESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIY 725
           ESV FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y    RVP++ 
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVE 297

Query: 726 ESPRHRLLVQDEPDFGMPM 782
              R  L V+DEPDFG+ M
Sbjct: 298 MCNRKMLRVRDEPDFGVSM 316


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  362 bits (928), Expect = 1e-97
 Identities = 175/259 (67%), Positives = 206/259 (79%)
 Frame = +3

Query: 6   YEIDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPH 185
           Y++D   + R  DYEKV PHAFVHFA   SA  AL AAG   LIL  KPL VSLGPENP+
Sbjct: 58  YDVDAARVHRMKDYEKVVPHAFVHFASSESAKYALAAAGGNGLILGKKPLIVSLGPENPY 117

Query: 186 HLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDT 365
            LN++RRTT+P+K SDV VE+GV+ S+++FVVGWRGPRTGVDF VDPFNG CK+ FTKDT
Sbjct: 118 RLNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACKILFTKDT 177

Query: 366 AFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIK 545
           AFSF+GE K A+IKCNF+IEF+ REI EIK ++DF SL++LLQLASSPL++YRTADDDI+
Sbjct: 178 AFSFRGEAKHAIIKCNFKIEFMVREINEIKKFKDFTSLVILLQLASSPLVFYRTADDDIE 237

Query: 546 ESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIY 725
           ESV FDLLDDDD WIRTTD T SGAIGRCNTYRIS+RPR GP   KA+ Y    RVP++ 
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVE 297

Query: 726 ESPRHRLLVQDEPDFGMPM 782
              R  L V+DEPDFG+ M
Sbjct: 298 MCNRKMLRVRDEPDFGVSM 316


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
           tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
           tuberosum]
          Length = 1198

 Score =  356 bits (913), Expect = 6e-96
 Identities = 173/259 (66%), Positives = 208/259 (80%)
 Frame = +3

Query: 6   YEIDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPH 185
           Y+ID E ++R ++Y KVEPHAFVHFA   SA +AL AA R EL L  KPLKVSLGPENP 
Sbjct: 58  YDIDVENVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENPF 117

Query: 186 HLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDT 365
           ++N++RRT +P+K SDV VE+GV+ S ++FVVGWRGP +GV+FLVDPFNG CK+ FT+DT
Sbjct: 118 NMNKRRRTIMPFKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGTCKILFTRDT 177

Query: 366 AFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIK 545
           AF FKGE K AVIKCNF+IEFL REI EI   +DF SL++LLQL SSPL++YRTADDDI+
Sbjct: 178 AFCFKGEGKHAVIKCNFKIEFLLREINEINECKDFASLVLLLQLTSSPLVFYRTADDDIE 237

Query: 546 ESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIY 725
           ESV FDLLDDDD WIRTTD T SGAIGR NTYRIS+RPR GP L KA+ Y R+ RVPV+ 
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITCSGAIGRFNTYRISIRPRNGPSLKKAMNYFRESRVPVVE 297

Query: 726 ESPRHRLLVQDEPDFGMPM 782
           +  R  L V+DEPDFG+ +
Sbjct: 298 QGNRQMLRVRDEPDFGVSL 316


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
           gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
           6 [Solanum lycopersicum]
          Length = 1197

 Score =  348 bits (892), Expect = 2e-93
 Identities = 172/256 (67%), Positives = 205/256 (80%)
 Frame = +3

Query: 6   YEIDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPH 185
           Y+ID E ++R ++Y KVEPHAFVHFA   SA +AL AA R EL L  KPLKVSLGPEN  
Sbjct: 58  YDIDVEKVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENTF 117

Query: 186 HLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDT 365
           ++NE+RRT +PYK SDV VE+GV+ S ++FVVGWRGP +GV+FLVDPFNG+CK+ FT+DT
Sbjct: 118 NMNERRRTFMPYKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGKCKILFTRDT 177

Query: 366 AFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIK 545
           AF FKGE K AVIKCNF+IEFL REI EI   +DF SL++LLQLASSPL++YRTADDDI+
Sbjct: 178 AFCFKGEGKHAVIKCNFKIEFLLREINEINECKDFSSLVLLLQLASSPLVFYRTADDDIE 237

Query: 546 ESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIY 725
           ESV FDLLDDDD WIRTTD T SGAIGR NTYR+S+RPR GP   KA+ Y R+ RVPV+ 
Sbjct: 238 ESVAFDLLDDDDQWIRTTDITFSGAIGRFNTYRVSIRPRNGPSFKKAMNYFRESRVPVV- 296

Query: 726 ESPRHRLLVQDEPDFG 773
           E     L V++EPDFG
Sbjct: 297 EQGEQMLRVRNEPDFG 312


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score =  347 bits (890), Expect = 3e-93
 Identities = 172/261 (65%), Positives = 209/261 (80%), Gaps = 1/261 (0%)
 Frame = +3

Query: 3   NYEI-DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPEN 179
           N+EI D+  IQR DDY+KVEPHAFVHFA   +AT A+DAAGR EL+   + LKVSLGPEN
Sbjct: 57  NFEILDSTVIQRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPEN 116

Query: 180 PHHLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTK 359
           P++LN +RR T P+KLSDV +++G M SR+EF VGWRGP  GVDFLVDPF+G CK  F++
Sbjct: 117 PYYLNRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSR 176

Query: 360 DTAFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDD 539
           DTAFSFKG  + AVIKC+F++EFL R+I EIK Y +   L+V LQLASSP ++YRTADD+
Sbjct: 177 DTAFSFKGTTEYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQLASSPRVWYRTADDE 236

Query: 540 IKESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPV 719
           I+ESVPFDLLDDDD WIRTTDFTPSGAIGRCNTYR+ +RPR+G  L KAL+YLR++RVP+
Sbjct: 237 IEESVPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPM 296

Query: 720 IYESPRHRLLVQDEPDFGMPM 782
            Y   R  L + DEPDFG  M
Sbjct: 297 DY--VRWPLRISDEPDFGRSM 315


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score =  345 bits (885), Expect = 1e-92
 Identities = 170/261 (65%), Positives = 208/261 (79%), Gaps = 1/261 (0%)
 Frame = +3

Query: 3   NYEI-DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPEN 179
           N+EI DT  IQR D Y +VEPHAFVHFA   SAT A +AAG  EL   G+P+KVSLGPEN
Sbjct: 57  NFEITDTAVIQRVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPEN 116

Query: 180 PHHLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTK 359
           P HLN++RRTTIP+KLSDV VE+G + SR+EF+VGWRGP +GVDFLVDPF+G+CK  FT+
Sbjct: 117 PFHLNQRRRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTR 176

Query: 360 DTAFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDD 539
           DTAFSFKG  + AVI+C+F++EFL R+I EIK Y D   L++LLQLAS+P ++YRTADDD
Sbjct: 177 DTAFSFKGTTEHAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDD 236

Query: 540 IKESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPV 719
           I+  VPFDLLDDDDPWIRTTDFTPSGAIGRCN+YR+S+ PR+G  L +AL +LR+RRV  
Sbjct: 237 IEVLVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQ- 295

Query: 720 IYESPRHRLLVQDEPDFGMPM 782
             +  R  L V  EP++ MPM
Sbjct: 296 -EDCLRRPLHVTAEPEYEMPM 315


>gb|EPS62146.1| hypothetical protein M569_12646, partial [Genlisea aurea]
          Length = 1195

 Score =  344 bits (882), Expect = 2e-92
 Identities = 167/260 (64%), Positives = 198/260 (76%)
 Frame = +3

Query: 3   NYEIDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENP 182
           NY+ID   +Q  +DYE+ + HA+VHFA+   A  A DAA  G L +  K L+V LGP+NP
Sbjct: 51  NYDIDISRVQGNNDYERAKRHAYVHFAIPKCAKLAADAAASGRLTMGQKQLRVGLGPQNP 110

Query: 183 HHLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKD 362
           H +NE+RRT   YKL DV VEVG M+S+ EF VGWRGP +GVDF+VDP+NG CK+QF +D
Sbjct: 111 HRMNERRRTISSYKLFDVSVEVGSMKSQNEFYVGWRGPSSGVDFIVDPYNGTCKIQFERD 170

Query: 363 TAFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDI 542
           TAFS   E +  V+KCNF+IEF PREIIEIK YRDF SLI++LQL SSPLIYYRTADDDI
Sbjct: 171 TAFSITDEDRLVVMKCNFKIEFTPREIIEIKRYRDFYSLIIMLQLFSSPLIYYRTADDDI 230

Query: 543 KESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVI 722
           +++VPFDLL+DDDPWIRTTDFT +GAIGRCNTYRISVRP  GP L KAL+YLR RRV V 
Sbjct: 231 EDAVPFDLLEDDDPWIRTTDFTSTGAIGRCNTYRISVRPLSGPQLLKALDYLRLRRVKVF 290

Query: 723 YESPRHRLLVQDEPDFGMPM 782
            E     + V DEP FG  M
Sbjct: 291 DEFKGKHIRVMDEPGFGTLM 310


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  337 bits (863), Expect = 4e-90
 Identities = 165/260 (63%), Positives = 197/260 (75%), Gaps = 2/260 (0%)
 Frame = +3

Query: 3   NYEIDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENP 182
           N+EI+T  ++R DDY +VEPHAFVHF    S T A+DAAGR EL    +PLKVSLGPENP
Sbjct: 57  NFEINTADVKRTDDYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFFNNEPLKVSLGPENP 116

Query: 183 HHLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKD 362
           + LN +RRT  P+KLSDV VE+G +  ++EF   WRGP  GVDF+VDPF+G CK  FT D
Sbjct: 117 YFLNRRRRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGTCKFCFTMD 176

Query: 363 TAFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDI 542
           TAFSFKG  K AVIKC+F++EFL REI EIK Y D   L++LL+L SSP + YRTADDDI
Sbjct: 177 TAFSFKGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVILLRLTSSPWVSYRTADDDI 236

Query: 543 KESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVP-- 716
            +SVPFDLLDDDDPWIRTTDFTPSGAIGRCN+YR+ + PR+G  L KA+ YLR+RRV   
Sbjct: 237 DQSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEV 296

Query: 717 VIYESPRHRLLVQDEPDFGM 776
            I   P+    +QDEPDFGM
Sbjct: 297 CIKWPPK----IQDEPDFGM 312


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score =  336 bits (862), Expect = 5e-90
 Identities = 166/261 (63%), Positives = 206/261 (78%), Gaps = 1/261 (0%)
 Frame = +3

Query: 3   NYEI-DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPEN 179
           N+EI DT  IQRKD+Y+KVEPHAFVHFA   + T A+DAAGR EL    + LKVSLGPEN
Sbjct: 57  NFEITDTTVIQRKDNYKKVEPHAFVHFASPQAVTWAVDAAGRTELAFNNQLLKVSLGPEN 116

Query: 180 PHHLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTK 359
           P++LN +RR T P+KL DV +E+G + S +EF+VGWRGP +GV+FLVDPF+  CK  F++
Sbjct: 117 PYYLNRRRRDTTPFKLPDVSLEIGTLASCDEFIVGWRGPPSGVEFLVDPFDCTCKFCFSR 176

Query: 360 DTAFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDD 539
           DTAFSFKG  + AVIKC+F++EFL REI E+K Y +    +VLLQLASSP ++YRTADDD
Sbjct: 177 DTAFSFKGTNEHAVIKCDFKVEFLVREINEVKQYSEPTGFVVLLQLASSPWVWYRTADDD 236

Query: 540 IKESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPV 719
            +++VPF LLDDDD WIRTTDFT SGAIGRCNTYR+ VRPR+G  L KA++YLR+RRVPV
Sbjct: 237 FEKTVPFGLLDDDDQWIRTTDFTASGAIGRCNTYRVLVRPRHGLKLKKAMDYLRERRVPV 296

Query: 720 IYESPRHRLLVQDEPDFGMPM 782
             E  R +L ++DEPDFG  M
Sbjct: 297 --EDLRSQLRIRDEPDFGRSM 315


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score =  335 bits (858), Expect = 1e-89
 Identities = 164/261 (62%), Positives = 205/261 (78%), Gaps = 1/261 (0%)
 Frame = +3

Query: 3   NYEI-DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPEN 179
           N+EI D   I R +DY +VEPHAFVHFA+  SAT A+DAA R EL L  K LK SLGPEN
Sbjct: 57  NFEITDITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPEN 116

Query: 180 PHHLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTK 359
           P  LN++RR T P+KLS V VE+G + SR+EF VGWRGP TGVDFLVDPF+G C+  F++
Sbjct: 117 PFTLNQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSR 176

Query: 360 DTAFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDD 539
           +TAFSFK   + AVIKC+F++EFL R+I EIK Y +   L++LLQLAS+P ++YRTADDD
Sbjct: 177 NTAFSFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDD 236

Query: 540 IKESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPV 719
           I+ SVPFDLLDDDDPWIRTTDFT SGAIGRC++YR+S+ PR+GP L KA+++L++RRV  
Sbjct: 237 IEVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQE 296

Query: 720 IYESPRHRLLVQDEPDFGMPM 782
            Y   R  + ++DEPDFGMPM
Sbjct: 297 EY--LRRPIRIRDEPDFGMPM 315


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571449461|ref|XP_006578148.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  332 bits (852), Expect = 7e-89
 Identities = 162/257 (63%), Positives = 200/257 (77%)
 Frame = +3

Query: 12  IDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHL 191
           IDT  I+R +DY+KVEPHAFVHFA   S T+AL+A+G  +L L+ +PLKVS GP+NP+ L
Sbjct: 61  IDTAKIRRTEDYKKVEPHAFVHFASPESVTAALNASGCCDLFLKNQPLKVSCGPKNPYFL 120

Query: 192 NEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAF 371
           N++RRTT P+K+SDV VE+G + S  EF V WRGP  GV FLVDPF+G C+  F++DTAF
Sbjct: 121 NQRRRTTTPFKMSDVLVEIGTLVSPGEFFVSWRGPDKGVKFLVDPFDGMCRFCFSRDTAF 180

Query: 372 SFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKES 551
           SFKG  K AVIKC+F++ FL R+I EI+ Y D   L+VLL LASSP ++YRTADDDI+ES
Sbjct: 181 SFKGIDKKAVIKCDFQVGFLVRDINEIRRYNDTSYLVVLLHLASSPWVWYRTADDDIEES 240

Query: 552 VPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYES 731
           VPFDLLDDDDPWIRTTDFTPSGAIGRCN YRIS+ PR+G  L KA+ YL+ +RV +    
Sbjct: 241 VPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRHGAKLMKAMLYLKGQRVQIQELP 300

Query: 732 PRHRLLVQDEPDFGMPM 782
            +  L  Q+EPDFGMPM
Sbjct: 301 LKQTLRTQNEPDFGMPM 317


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571459266|ref|XP_006581359.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score =  332 bits (850), Expect = 1e-88
 Identities = 162/257 (63%), Positives = 200/257 (77%)
 Frame = +3

Query: 12  IDTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHL 191
           IDT  I+R D+Y+KVEPHAFVHFA   S T+AL+A+G  +L L+ +PLKVS GPENP+ L
Sbjct: 61  IDTANIRRTDNYKKVEPHAFVHFASPESVTAALNASGCCDLFLKNQPLKVSCGPENPYFL 120

Query: 192 NEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAF 371
           N++RRTT P+K+SDV VE+G + S  EF V WRGP  GV FLVDPF+G C+  F++DTAF
Sbjct: 121 NQRRRTTTPFKMSDVLVEIGTLVSPGEFFVSWRGPDKGVKFLVDPFDGMCRFCFSRDTAF 180

Query: 372 SFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKES 551
           SFKG  K AVIKC+F++ FL R+I EIK Y D   L+VLL LASSP ++YRTADDDI+ES
Sbjct: 181 SFKGIEKKAVIKCDFQVGFLVRDINEIKRYNDTSYLVVLLHLASSPWVWYRTADDDIEES 240

Query: 552 VPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYES 731
           VPFDLLDDDDPWIRTTDFTPSGAIGRCN YRIS+ PR+G  L KA+ YL+ +RV +   +
Sbjct: 241 VPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRHGAKLMKAMLYLKGQRVQMQELA 300

Query: 732 PRHRLLVQDEPDFGMPM 782
            +  L   +EPDFG+PM
Sbjct: 301 LKQTLRTLNEPDFGVPM 317


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score =  330 bits (845), Expect = 4e-88
 Identities = 162/262 (61%), Positives = 207/262 (79%), Gaps = 2/262 (0%)
 Frame = +3

Query: 3   NYEI-DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPEN 179
           N+EI D   I+R +DY +V PHAFVHFA+  SAT A++A+GR EL L  K LKVSLGP+N
Sbjct: 57  NFEITDITKIERTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKN 116

Query: 180 PHHLNEKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTK 359
           P  LN++RRTT P+KLSDV  E+G + SR+EF VGWRGP +GVDFLVDPF+G CK  F++
Sbjct: 117 PFTLNQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSR 176

Query: 360 DTAFSFKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDD 539
           +TAFS K   + AVIKC+F++EFL R+I EI  Y +   L++LLQLAS+P ++YRTADDD
Sbjct: 177 NTAFSLKSTSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDD 236

Query: 540 IKESVPFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPV 719
           I+  VPFDLLDDDDPWIRTTDFT SGAIGRC++YR+S+ PR+G  L KA++YL++RRV V
Sbjct: 237 IEAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQV 296

Query: 720 IY-ESPRHRLLVQDEPDFGMPM 782
           +  E+ R R+ + DEPDFGMPM
Sbjct: 297 LQEENHRRRIRILDEPDFGMPM 318


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score =  325 bits (834), Expect = 8e-87
 Identities = 160/257 (62%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
 Frame = +3

Query: 15  DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 194
           DT  ++R DDY+KVEPHAFVHFA+  S T ALDA+G  +L+  GKPLKV  GP+NP+ LN
Sbjct: 62  DTALVKRTDDYKKVEPHAFVHFALPESVTEALDASGSCDLMWEGKPLKVISGPQNPYFLN 121

Query: 195 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 374
           ++RR   P+KLSDV VE+G + S EEFVV WRGP  GV+ LVDPF+  C+L+F++DTAFS
Sbjct: 122 QRRRKETPFKLSDVLVEIGTLVSPEEFVVAWRGPEKGVNLLVDPFDRMCRLRFSRDTAFS 181

Query: 375 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 554
            K   K AVIKC+F++EF+ R+I E++ Y D    +VLL LASSPL++YRTADDDI+ESV
Sbjct: 182 IKQNEKKAVIKCDFKVEFMVRDIYEVRRYDDTSYRVVLLHLASSPLVWYRTADDDIEESV 241

Query: 555 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 734
            FDLLDDDDPWIRTTDFTPSGAIGRCN YRIS+ PR+G  L KA+ YL  +RV    E P
Sbjct: 242 SFDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRHGAKLMKAMAYLNFQRV---QEFP 298

Query: 735 RHR-LLVQDEPDFGMPM 782
             R L +QDEP+FG+PM
Sbjct: 299 LKRPLRIQDEPNFGVPM 315


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
           arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
           arietinum]
          Length = 1201

 Score =  323 bits (828), Expect = 4e-86
 Identities = 158/256 (61%), Positives = 196/256 (76%)
 Frame = +3

Query: 15  DTEGIQRKDDYEKVEPHAFVHFAVKHSATSALDAAGRGELILRGKPLKVSLGPENPHHLN 194
           +T  I+  DDY+KV PHAFVHF ++ SAT AL+A+G+ +L L  +PL V  GP+NP+ LN
Sbjct: 62  NTAQIETTDDYKKVAPHAFVHFTLQESATEALNASGQCDLFLHNQPLTVLCGPQNPNFLN 121

Query: 195 EKRRTTIPYKLSDVFVEVGVMRSREEFVVGWRGPRTGVDFLVDPFNGRCKLQFTKDTAFS 374
            +RRT  P+K+SDV VE+G + S EEFVV WRGP  G++FLVDPF+  CKL F +DTAFS
Sbjct: 122 RRRRTATPFKMSDVIVEIGTLVSPEEFVVAWRGPDKGLNFLVDPFDSMCKLCFNRDTAFS 181

Query: 375 FKGEVKSAVIKCNFRIEFLPREIIEIKHYRDFPSLIVLLQLASSPLIYYRTADDDIKESV 554
           FKG  K+ VIKC+F++ FL R+I EIK Y D   L+VLL LASSPL++YRTADDDI+ESV
Sbjct: 182 FKGIAKTTVIKCDFKVGFLVRDIEEIKRYDDTSHLVVLLHLASSPLVWYRTADDDIEESV 241

Query: 555 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISVRPRYGPYLTKALEYLRKRRVPVIYESP 734
             DLLDDDDPWIRTTDFTPSGAIGRCN YRIS+ PRYG  L KA+EYLR +RV  +    
Sbjct: 242 TIDLLDDDDPWIRTTDFTPSGAIGRCNFYRISIPPRYGAKLNKAMEYLRCQRVQRV--PL 299

Query: 735 RHRLLVQDEPDFGMPM 782
           +  L + +EPDFG+PM
Sbjct: 300 KRPLRILNEPDFGVPM 315