BLASTX nr result
ID: Rehmannia25_contig00023874
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00023874
(766 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo... 90 2e-23
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze... 92 1e-22
gb|EAZ04413.1| hypothetical protein OsI_26557 [Oryza sativa Indi... 88 3e-22
gb|EPS69206.1| hypothetical protein M569_05560, partial [Genlise... 73 1e-21
ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein A... 82 1e-21
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622... 82 4e-21
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo... 82 4e-21
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 79 9e-21
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A... 79 9e-21
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A... 79 9e-21
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 88 1e-20
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 88 1e-20
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 88 1e-20
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 76 1e-20
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 76 1e-20
ref|XP_004301837.1| PREDICTED: putative ribonuclease H protein A... 72 1e-20
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 75 2e-20
gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi... 88 2e-20
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 87 3e-20
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo... 87 3e-20
>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
Length = 613
Score = 89.7 bits (221), Expect(2) = 2e-23
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Frame = -2
Query: 552 GCQVTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFT 373
G + V +L+N + +REL+ F +ED + +L + + G D WH+D +G F+
Sbjct: 198 GIVLNKVADLINPITGEWDRELIQDIFWEEDVKNILAIPVH-NGYSDVAAWHFDPRGIFS 256
Query: 372 VNSAYKQLSQM---QVWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLP 202
V SAY L Q + SG + QW K W+LN K+KHFLWR+ ++SLP
Sbjct: 257 VKSAYHTLEYQRDRQAIRQTGESSSGKTSSAALQWEKLWRLNHLPKVKHFLWRLAHNSLP 316
Query: 201 TAMALNQRGRKMDPICTLC 145
+++RG ++D C +C
Sbjct: 317 LRQNISKRGMEIDTRCPVC 335
Score = 46.2 bits (108), Expect(2) = 2e-23
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIP 591
FP+G ++ G S+ W+S ++ L +GL ++VGDG +I + + PWIP
Sbjct: 134 FPDGKLMEVRESPGISYSWRSIVRGVQVLKVGLIWRVGDGTDIDMWNDPWIP 185
>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
Length = 472
Score = 92.4 bits (228), Expect(2) = 1e-22
Identities = 46/130 (35%), Positives = 73/130 (56%)
Frame = -2
Query: 534 VRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNSAYK 355
V EL++ + LV F +EDA+C+L + I+ EG +D WH D KG F+V SAY
Sbjct: 67 VAELIDPITGSWDCRLVRDTFLQEDADCILAIPIQ-EGMEDTLAWHGDPKGNFSVKSAYA 125
Query: 354 QLSQMQVWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMALNQRG 175
S+ + ++ S S E W W +N+ NK+K FLWR+ ++S P + + +RG
Sbjct: 126 LASRRRDHHNNADASSSISGRGENVWKSIWNVNVTNKIKMFLWRLAHNSHPVRVNIARRG 185
Query: 174 RKMDPICTLC 145
K++ +C +C
Sbjct: 186 IKIETLCPMC 195
Score = 41.2 bits (95), Expect(2) = 1e-22
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = -3
Query: 731 FLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPK 588
FL K G S+ W++ +K L GL +++GDG +++ PWIP+
Sbjct: 2 FLKQEQKKGISYTWRNVLKGLHLLKEGLIWRIGDGNQVNIWVDPWIPR 49
>gb|EAZ04413.1| hypothetical protein OsI_26557 [Oryza sativa Indica Group]
Length = 374
Score = 88.2 bits (217), Expect(2) = 3e-22
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Frame = -2
Query: 552 GCQVTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFT 373
G + V +L+N + +REL+ F +ED + +L + + G D WH+D +G F
Sbjct: 198 GIVLNKVADLINPITGEWDRELIQDIFWEEDVKNILAIPVH-NGYSDVAAWHFDPRGIFL 256
Query: 372 VNSAYKQLSQMQVWKSDRP---EPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLP 202
V SAY L + ++ R SG + QW K W+LN K+KHFLWR+ ++SLP
Sbjct: 257 VKSAYHTLEYQRDRQAIRQIGESSSGKTSSAALQWEKLWRLNHLPKVKHFLWRLAHNSLP 316
Query: 201 TAMALNQRGRKMDPICTLC 145
+++RG ++D C +C
Sbjct: 317 LRQNISKRGMEIDTRCPVC 335
Score = 43.9 bits (102), Expect(2) = 3e-22
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIP 591
FP+G ++ G S+ W+S ++ L +GL ++VGD +I + + PWIP
Sbjct: 134 FPDGKLMEVRESPGISYSWRSIVRGVQVLKVGLIWRVGDSTDIDMWNDPWIP 185
>gb|EPS69206.1| hypothetical protein M569_05560, partial [Genlisea aurea]
Length = 474
Score = 73.2 bits (178), Expect(3) = 1e-21
Identities = 39/141 (27%), Positives = 65/141 (46%)
Frame = -2
Query: 555 LGCQVTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRF 376
LG V+EL+ S+ ++ N + Q F D C+L + + DR +WH+ +G +
Sbjct: 70 LGMANMRVKELIISNQAEWNLSRLRQTFSSSDVHCILAIPLAKNPYPDRLIWHFTRQGEY 129
Query: 375 TVNSAYKQLSQMQVWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTA 196
+V + Y+ L S P S + + W WKL + ++ F WR H LP
Sbjct: 130 SVKTGYQLLKSTSEMNS--PGSSRSNANKILMWQALWKLKLPMRILTFNWRFGKHILPLK 187
Query: 195 MALNQRGRKMDPICTLCGKSK 133
+L +R DP C+ C + +
Sbjct: 188 DSLVRRRIGTDPTCSACEEDR 208
Score = 49.7 bits (117), Expect(3) = 1e-21
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
FP+ FL S+ W+S + L GLR+++GDG +I V PWIP T FKP
Sbjct: 6 FPHSTFLQAPLGRSPSYAWRSIHSCRDVLTGGLRWRIGDGSSIDVWKDPWIPDTFAFKP 64
Score = 27.3 bits (59), Expect(3) = 1e-21
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = -1
Query: 142 EEQETTEHVFF*CERAQLVWKLS----PVQWFDTLHP 44
E++ET H F C +Q VW+L + ++LHP
Sbjct: 206 EDRETWFHAFISCSFSQAVWRLGGFSMDMAGLESLHP 242
>ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 813
Score = 82.4 bits (202), Expect(2) = 1e-21
Identities = 44/121 (36%), Positives = 59/121 (48%)
Frame = -2
Query: 498 NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNSAYKQLSQMQVWKSDR 319
NR LV FD DAE +L + I G DR VWH D+KG FT SAY Q +Q W
Sbjct: 469 NRNLVNILFDASDAELILSIPISSRGRADRLVWHHDAKGAFTTKSAYWQAAQ---WLH-- 523
Query: 318 PEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMALNQRGRKMDPICTLCGK 139
+ S E+ W+ W+ N+ K+K W+ LPT L + +D +C LC
Sbjct: 524 -SSASTSSQVEQIWHHIWRSNVPRKVKINAWKACGSILPTVSQLRTKHVYIDALCYLCNS 582
Query: 138 S 136
+
Sbjct: 583 A 583
Score = 47.4 bits (111), Expect(2) = 1e-21
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKPK 567
FP+ F +G + WK + + LA G+R++VGDG + + + PW+P+ FKP
Sbjct: 391 FPSSSFWSATATDGSA-CWKGIAEARSVLARGMRWQVGDGTRVCIWEDPWLPRPFSFKPL 449
Query: 566 KNDNWDVKLL 537
N + L+
Sbjct: 450 YRVNTHIVLV 459
>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
Length = 1160
Score = 81.6 bits (200), Expect(2) = 4e-21
Identities = 40/130 (30%), Positives = 71/130 (54%)
Frame = -2
Query: 534 VRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNSAYK 355
V EL+N + + EL+Y+ FDK DA+ + Q+ + +D +WH+ G++TV S Y+
Sbjct: 730 VSELINGENCW-DEELIYKHFDKMDADVITQIPLPRRLREDELIWHFGKSGQYTVKSGYQ 788
Query: 354 QLSQMQVWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMALNQRG 175
+ +++ P S+ ++ +WN W L + K++ F+WR + LP+A L +R
Sbjct: 789 RALKIRF-----PAMPSSSESSKNEWNIIWSLALPKKIRIFVWRAAKNLLPSAENLWKRK 843
Query: 174 RKMDPICTLC 145
+P C LC
Sbjct: 844 IVQEPTCQLC 853
Score = 46.6 bits (109), Expect(2) = 4e-21
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
F + FL+ + S+IW+S + + + G R+++G+G+++H+ + WIPK FKP
Sbjct: 660 FHSSNFLNAKIGSNPSYIWRSILWGRQIICGGSRWRIGNGQDVHIHKANWIPKPFTFKP 718
>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
Length = 615
Score = 82.0 bits (201), Expect(2) = 4e-21
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Frame = -2
Query: 543 VTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNS 364
V V +L++ ++EL+ F +ED + +L + I G +D WH+D++G F+V S
Sbjct: 413 VNKVTDLIDPTIGKWDKELIEGLFWEEDVKQILTIPIRA-GVEDGLAWHFDNRGIFSVKS 471
Query: 363 AYKQLS---QMQVWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAM 193
AY L + K D SG + + W + WKL K+KHF+W + ++SLP M
Sbjct: 472 AYHVLEDERRRHKPKQDGASSSGQTNMEKLCWQQIWKLPYLPKVKHFIWHLAHNSLPFRM 531
Query: 192 ALNQRGRKMDPICTLCGKSKRQLNMY 115
++ +RG ++D C +C + Y
Sbjct: 532 SIQKRGMQIDTRCPVCHRQNEDGGHY 557
Score = 46.2 bits (108), Expect(2) = 4e-21
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIP 591
FP G + K G S+ W+S ++ L GL ++VGDG NI + PW+P
Sbjct: 346 FPTGDLMAVREKPGISYSWRSIVRGIQALKKGLIWRVGDGTNIDIWHDPWLP 397
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis]
Length = 968
Score = 79.0 bits (193), Expect(2) = 9e-21
Identities = 42/127 (33%), Positives = 66/127 (51%)
Frame = -2
Query: 492 ELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNSAYKQLSQMQVWKSDRPE 313
+++ Q F +EDA +L++ + + + D+ +WH+D KG ++V S Y+ QM+ P
Sbjct: 587 DVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKF-----PN 641
Query: 312 PSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMALNQRGRKMDPICTLCGKSK 133
SK WN W L I K+K F+WR N LPT+ L +R P C C +S
Sbjct: 642 RPSSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRC-RSH 700
Query: 132 RQLNMYS 112
R+ +S
Sbjct: 701 RETIFHS 707
Score = 48.1 bits (113), Expect(2) = 9e-21
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
F + F++ + S+IW+S + + + GLR+++GDGK + V S W+P+ FKP
Sbjct: 504 FRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKP 562
>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 769
Score = 79.0 bits (193), Expect(2) = 9e-21
Identities = 42/127 (33%), Positives = 66/127 (51%)
Frame = -2
Query: 492 ELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNSAYKQLSQMQVWKSDRPE 313
+++ Q F +EDA +L++ + + + D+ +WH+D KG ++V S Y+ QM+ P
Sbjct: 384 DVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKF-----PN 438
Query: 312 PSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMALNQRGRKMDPICTLCGKSK 133
SK WN W L I K+K F+WR N LPT+ L +R P C C +S
Sbjct: 439 RPSSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRC-RSH 497
Query: 132 RQLNMYS 112
R+ +S
Sbjct: 498 RETIFHS 504
Score = 48.1 bits (113), Expect(2) = 9e-21
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
F + F++ + S+IW+S + + + GLR+++GDGK + V S W+P+ FKP
Sbjct: 301 FRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKP 359
>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Citrus sinensis]
Length = 765
Score = 79.0 bits (193), Expect(2) = 9e-21
Identities = 42/127 (33%), Positives = 66/127 (51%)
Frame = -2
Query: 492 ELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNSAYKQLSQMQVWKSDRPE 313
+++ Q F +EDA +L++ + + + D+ +WH+D KG ++V S Y+ QM+ P
Sbjct: 384 DVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQMKF-----PN 438
Query: 312 PSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMALNQRGRKMDPICTLCGKSK 133
SK WN W L I K+K F+WR N LPT+ L +R P C C +S
Sbjct: 439 RPSSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRC-RSH 497
Query: 132 RQLNMYS 112
R+ +S
Sbjct: 498 RETIFHS 504
Score = 48.1 bits (113), Expect(2) = 9e-21
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
F + F++ + S+IW+S + + + GLR+++GDGK + V S W+P+ FKP
Sbjct: 301 FRHSCFMEAQIGSNPSYIWRSILWGREVIRKGLRWRIGDGKLVKVYQSGWLPRPETFKP 359
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 87.8 bits (216), Expect(3) = 1e-20
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -2
Query: 543 VTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNS 364
VT V EL++ + +L+ Q F +ED + + + E +D WH+D++G FTV S
Sbjct: 1213 VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKS 1271
Query: 363 AYKQLSQMQ--VWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMA 190
AYK +M+ ++ P S + W K WKL + K+KHFLWR+ +++L
Sbjct: 1272 AYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRAN 1331
Query: 189 LNQRGRKMDPICTLCGK 139
L+ RG +D C +CG+
Sbjct: 1332 LHHRGMDVDTRCVMCGR 1348
Score = 38.1 bits (87), Expect(3) = 1e-20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
FP G + S+ W+S K L G+ ++VGDG I++ PWIP+ KP
Sbjct: 1146 FPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP 1204
Score = 20.8 bits (42), Expect(3) = 1e-20
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 133 ETTEHVFF*CERAQLVWK 80
E H+FF C+ + VW+
Sbjct: 1351 EDAGHLFFKCKPVKKVWQ 1368
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 87.8 bits (216), Expect(3) = 1e-20
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -2
Query: 543 VTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNS 364
VT V EL++ + +L+ Q F +ED + + + E +D WH+D++G FTV S
Sbjct: 1158 VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKS 1216
Query: 363 AYKQLSQMQ--VWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMA 190
AYK +M+ ++ P S + W K WKL + K+KHFLWR+ +++L
Sbjct: 1217 AYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRAN 1276
Query: 189 LNQRGRKMDPICTLCGK 139
L+ RG +D C +CG+
Sbjct: 1277 LHHRGMDVDTRCVMCGR 1293
Score = 38.1 bits (87), Expect(3) = 1e-20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
FP G + S+ W+S K L G+ ++VGDG I++ PWIP+ KP
Sbjct: 1091 FPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP 1149
Score = 20.8 bits (42), Expect(3) = 1e-20
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 133 ETTEHVFF*CERAQLVWK 80
E H+FF C+ + VW+
Sbjct: 1296 EDAGHLFFKCKPVKKVWQ 1313
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 87.8 bits (216), Expect(3) = 1e-20
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -2
Query: 543 VTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNS 364
VT V EL++ + +L+ Q F +ED + + + E +D WH+D++G FTV S
Sbjct: 1154 VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKS 1212
Query: 363 AYKQLSQMQ--VWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMA 190
AYK +M+ ++ P S + W K WKL + K+KHFLWR+ +++L
Sbjct: 1213 AYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRAN 1272
Query: 189 LNQRGRKMDPICTLCGK 139
L+ RG +D C +CG+
Sbjct: 1273 LHHRGMDVDTRCVMCGR 1289
Score = 38.1 bits (87), Expect(3) = 1e-20
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
FP G + S+ W+S K L G+ ++VGDG I++ PWIP+ KP
Sbjct: 1087 FPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKP 1145
Score = 20.8 bits (42), Expect(3) = 1e-20
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 133 ETTEHVFF*CERAQLVWK 80
E H+FF C+ + VW+
Sbjct: 1292 EDAGHLFFKCKPVKKVWQ 1309
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 76.3 bits (186), Expect(3) = 1e-20
Identities = 46/132 (34%), Positives = 73/132 (55%)
Frame = -2
Query: 540 TWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNSA 361
T V +L++S+ + + Q F KED E +L++ + +D +WH+D KG ++V S
Sbjct: 1052 TVVADLIDSENKW-RVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSG 1110
Query: 360 YKQLSQMQVWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMALNQ 181
Y QL+ Q + ++ PE S S R W W L++ K+K F+WR + + LPTA L +
Sbjct: 1111 Y-QLALNQNFPNE-PESSNSSS---RLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWK 1165
Query: 180 RGRKMDPICTLC 145
R +PIC C
Sbjct: 1166 RRSLQEPICQRC 1177
Score = 44.3 bits (103), Expect(3) = 1e-20
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
+ N F + + S+IW+S + + G+R+++GDGK + V WIP+ F+P
Sbjct: 984 YKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQP 1042
Score = 26.2 bits (56), Expect(3) = 1e-20
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 133 ETTEHVFF*CERAQLVWKLSPV 68
ET HV C+ A+ +W L+P+
Sbjct: 1182 ETVSHVLIECKAARKIWDLAPL 1203
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 76.3 bits (186), Expect(3) = 1e-20
Identities = 46/132 (34%), Positives = 73/132 (55%)
Frame = -2
Query: 540 TWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNSA 361
T V +L++S+ + + Q F KED E +L++ + +D +WH+D KG ++V S
Sbjct: 365 TVVADLIDSENKW-RVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSG 423
Query: 360 YKQLSQMQVWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMALNQ 181
Y QL+ Q + ++ PE S S R W W L++ K+K F+WR + + LPTA L +
Sbjct: 424 Y-QLALNQNFPNE-PESSNSSS---RLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWK 478
Query: 180 RGRKMDPICTLC 145
R +PIC C
Sbjct: 479 RRSLQEPICQRC 490
Score = 44.3 bits (103), Expect(3) = 1e-20
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
+ N F + + S+IW+S + + G+R+++GDGK + V WIP+ F+P
Sbjct: 297 YKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQP 355
Score = 26.2 bits (56), Expect(3) = 1e-20
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 133 ETTEHVFF*CERAQLVWKLSPV 68
ET HV C+ A+ +W L+P+
Sbjct: 495 ETVSHVLIECKAARKIWDLAPL 516
>ref|XP_004301837.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 420
Score = 71.6 bits (174), Expect(3) = 1e-20
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Frame = -2
Query: 552 GCQVTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFT 373
G + V +L++ D S +L+ + F ++ E + ++ + DR +WH+D G ++
Sbjct: 61 GLEDLMVGDLIDPDTSTWMVDLLEELFYADEVEMIRKIPLSIRSPDDRLIWHFDKHGLYS 120
Query: 372 VNSAYKQLSQMQVWKS--DRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPT 199
V S Y + +S P+G +K W + WK+ + K+K F+WR++ + LPT
Sbjct: 121 VRSGYHLAGGVNADQSRGSSSSPAGSNK----TWKQVWKVRVLPKVKSFVWRLMRNILPT 176
Query: 198 AMALNQRGRKMDPICTLC 145
+AL+++ + +C C
Sbjct: 177 KVALSKKICMEEQLCPFC 194
Score = 50.1 bits (118), Expect(3) = 1e-20
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = -3
Query: 728 LDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
L+ K GDS+ W+S +K L G+R+++G G ++ V + PW+P+ FKP
Sbjct: 2 LEATVKAGDSYAWRSLMKGVDLLKQGVRFQIGTGSSVSVWNDPWLPRPYTFKP 54
Score = 25.0 bits (53), Expect(3) = 1e-20
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 139 EQETTEHVFF*CERAQLVWKLSPVQWFDTLHPTFTMKKWWEGVCEI 2
E ET H+F C A + +SP+ H M++W G+ ++
Sbjct: 197 ENETALHLFKECSGAACMLIISPLGLRARNHGANNMEEWVVGMMDV 242
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 75.1 bits (183), Expect(2) = 2e-20
Identities = 42/134 (31%), Positives = 70/134 (52%)
Frame = -2
Query: 540 TWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNSA 361
T V EL++ D ++ N + Q F +ED E +L++ + D +WH+D G ++V S
Sbjct: 935 TTVGELMD-DENNWNVAKLNQHFMQEDTEAILKIPLPRSQKVDEMMWHYDKHGEYSVKSG 993
Query: 360 YKQLSQMQVWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMALNQ 181
Y+ +++ D P SG + ++W W + + K+K F+WR + LPTA L +
Sbjct: 994 YQIALKLKA--PDEPSNSGSNS---KRWKAVWSMELPEKMKIFMWRAARNLLPTAENLWK 1048
Query: 180 RGRKMDPICTLCGK 139
R DPIC C +
Sbjct: 1049 RKCLKDPICQGCNR 1062
Score = 50.8 bits (120), Expect(2) = 2e-20
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
F + FLD P + S+IW+S + + + G R+++G+G NI V WIP+ FKP
Sbjct: 867 FKSCSFLDAKPGSNPSFIWRSILWGRQVIQKGARWRIGNGSNILVYKDNWIPRPDTFKP 925
>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
Length = 561
Score = 87.8 bits (216), Expect(3) = 2e-20
Identities = 46/137 (33%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Frame = -2
Query: 543 VTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNS 364
VT V EL++ + +L+ Q F +ED + + + E +D WH+D++G FTV S
Sbjct: 153 VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKS 211
Query: 363 AYKQLSQMQ--VWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMA 190
AYK +M+ ++ P S + W K WKL + K+KHFLWR+ +++L
Sbjct: 212 AYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRAN 271
Query: 189 LNQRGRKMDPICTLCGK 139
L+ RG +D C +CG+
Sbjct: 272 LHHRGMDVDTRCVMCGR 288
Score = 37.0 bits (84), Expect(3) = 2e-20
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
FP G + S+ W+S K L G+ +++GDG I++ PWIP+ KP
Sbjct: 86 FPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRGWSRKP 144
Score = 20.8 bits (42), Expect(3) = 2e-20
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 133 ETTEHVFF*CERAQLVWK 80
E H+FF C+ + VW+
Sbjct: 291 EDAGHLFFKCKPVKKVWQ 308
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 87.4 bits (215), Expect(3) = 3e-20
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 2/137 (1%)
Frame = -2
Query: 543 VTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNS 364
VT V EL++ + +L+ Q F +ED + + + E +D WH+D++G FTV S
Sbjct: 1186 VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKS 1244
Query: 363 AYKQLSQMQ--VWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMA 190
AYK +M+ ++ P S + W K WKL + K+KHFLWR+ +++L
Sbjct: 1245 AYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRAN 1304
Query: 189 LNQRGRKMDPICTLCGK 139
L RG +D C +CG+
Sbjct: 1305 LQHRGMDVDTRCVMCGR 1321
Score = 37.0 bits (84), Expect(3) = 3e-20
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
FP G + S+ W+S K L G+ +++GDG I++ PWIP+ KP
Sbjct: 1119 FPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRGWSRKP 1177
Score = 20.8 bits (42), Expect(3) = 3e-20
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 133 ETTEHVFF*CERAQLVWK 80
E H+FF C+ + VW+
Sbjct: 1324 EDAGHLFFKCKPVKKVWQ 1341
>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
Length = 639
Score = 87.4 bits (215), Expect(3) = 3e-20
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 2/137 (1%)
Frame = -2
Query: 543 VTWVRELVNSDGSD*NRELVYQCFDKEDAECVLQVKIEPEGTKDRYVWHWDSKGRFTVNS 364
VT V EL++ + +L+ Q F +ED + + + E +D WH+D++G FTV S
Sbjct: 153 VTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKS 211
Query: 363 AYKQLSQMQ--VWKSDRPEPSGGSKHTERQWNKCWKLNIKNKLKHFLWRIINHSLPTAMA 190
AYK +M+ ++ P S + W K WKL + K+KHFLWR+ +++L
Sbjct: 212 AYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRAN 271
Query: 189 LNQRGRKMDPICTLCGK 139
L RG +D C +CG+
Sbjct: 272 LQHRGMDVDTRCVMCGR 288
Score = 37.0 bits (84), Expect(3) = 3e-20
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -3
Query: 746 FPNGGFLDCNPKNGDSWIWKSWIKNKCTLALGLRYKVGDGKNIHVLDSPWIPKTPLFKP 570
FP G + S+ W+S K L G+ +++GDG I++ PWIP+ KP
Sbjct: 86 FPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRGWSRKP 144
Score = 20.8 bits (42), Expect(3) = 3e-20
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 133 ETTEHVFF*CERAQLVWK 80
E H+FF C+ + VW+
Sbjct: 291 EDAGHLFFKCKPVKKVWQ 308