BLASTX nr result

ID: Rehmannia25_contig00023793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00023793
         (409 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241528.1| PREDICTED: CASP-like protein At2g36330-like ...    91   1e-16
ref|XP_006345051.1| PREDICTED: CASP-like protein At2g36330-like ...    71   1e-10
ref|XP_006345050.1| PREDICTED: CASP-like protein At2g36330-like ...    71   1e-10
ref|XP_004236108.1| PREDICTED: CASP-like protein At2g36330-like ...    63   4e-08
gb|EXB87878.1| hypothetical protein L484_015008 [Morus notabilis]      55   1e-05

>ref|XP_004241528.1| PREDICTED: CASP-like protein At2g36330-like [Solanum lycopersicum]
          Length = 313

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 14/130 (10%)
 Frame = +1

Query: 61  NHSKRSLRRSSNSHISMSDNESTTSQVDSWHSPLRSE----NDD------SAENNCRSIV 210
           NH  R+L + S+SH+SMSD ES  SQ+DS+HSPLRSE    +DD      ++++  ++IV
Sbjct: 13  NH--RNLHKQSSSHLSMSDTESQVSQIDSFHSPLRSESPLRSDDPFPEPQNSKSPSKAIV 70

Query: 211 VVDKYSSPGKSNIPAAVENSEKPTSENLDSPASPHTA----SPAVVGLNKFVREETPSAV 378
            VDKY SP        + +S K +SENL SPA+P  A    SP +V +++ VRE+    V
Sbjct: 71  AVDKYFSP--------IRSSHKLSSENLSSPATPPPAVERRSP-LVYVSRAVREDMAPGV 121

Query: 379 KKVGPVSGGG 408
            KVGPV GGG
Sbjct: 122 TKVGPVRGGG 131


>ref|XP_006345051.1| PREDICTED: CASP-like protein At2g36330-like isoform X2 [Solanum
           tuberosum]
          Length = 265

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
 Frame = +1

Query: 46  SSDLSNHSKRSLRRSSNSHISMSDNESTTSQVDSWHSPLRSE----NDDSAEN------- 192
           SS  SN +     +  NSH+SMSD +S  SQ+DS+HSPLR E    +DD   +       
Sbjct: 8   SSSTSNSNHHRNFQKHNSHLSMSDTDSQVSQMDSFHSPLRFESLLCSDDPLPDHRATKSL 67

Query: 193 NCRSIVVVDKYSSPGKSNIPAAVENSEKPTSENLDSPASPHTASPAVVGLNKFVREETPS 372
           + +++V V+KY SP +S    ++EN   P +    S A     +   V  ++  RE+  +
Sbjct: 68  SSKALVSVEKYYSPVRSPHKLSLENLSSPPTPTPPSDAGNKDRNSQGVYFSRPGREDVTN 127

Query: 373 AVKKVGPVSGG 405
            V KVGPV GG
Sbjct: 128 GVTKVGPVRGG 138


>ref|XP_006345050.1| PREDICTED: CASP-like protein At2g36330-like isoform X1 [Solanum
           tuberosum]
          Length = 313

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
 Frame = +1

Query: 46  SSDLSNHSKRSLRRSSNSHISMSDNESTTSQVDSWHSPLRSE----NDDSAEN------- 192
           SS  SN +     +  NSH+SMSD +S  SQ+DS+HSPLR E    +DD   +       
Sbjct: 8   SSSTSNSNHHRNFQKHNSHLSMSDTDSQVSQMDSFHSPLRFESLLCSDDPLPDHRATKSL 67

Query: 193 NCRSIVVVDKYSSPGKSNIPAAVENSEKPTSENLDSPASPHTASPAVVGLNKFVREETPS 372
           + +++V V+KY SP +S    ++EN   P +    S A     +   V  ++  RE+  +
Sbjct: 68  SSKALVSVEKYYSPVRSPHKLSLENLSSPPTPTPPSDAGNKDRNSQGVYFSRPGREDVTN 127

Query: 373 AVKKVGPVSGG 405
            V KVGPV GG
Sbjct: 128 GVTKVGPVRGG 138


>ref|XP_004236108.1| PREDICTED: CASP-like protein At2g36330-like [Solanum lycopersicum]
          Length = 309

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 6/126 (4%)
 Frame = +1

Query: 46  SSDLSNHSKRSLRRSSNSHISMSDNESTTSQVDSWHSPLRSEND------DSAENNCRSI 207
           S+  SNH +   + +S S   MSD +S  SQ+DS+HSPL  E+       ++   + +++
Sbjct: 12  STSNSNHHRNFQKHNSQS---MSDTDSQVSQMDSFHSPLHFESQLHFDDRETKSLSSKAL 68

Query: 208 VVVDKYSSPGKSNIPAAVENSEKPTSENLDSPASPHTASPAVVGLNKFVREETPSAVKKV 387
           V VDKY SP +S    + EN   P +    S A         V   +  RE+  + V KV
Sbjct: 69  VSVDKYYSPVRSPHKLSCENLSLPPTPTPPSEAGNKDRKSQGVYFGRPGREDVTNGVTKV 128

Query: 388 GPVSGG 405
           GPV GG
Sbjct: 129 GPVRGG 134


>gb|EXB87878.1| hypothetical protein L484_015008 [Morus notabilis]
          Length = 295

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 15/138 (10%)
 Frame = +1

Query: 37  KMESSDLSNHSKRSLRRSSNSHISMSDNESTTSQVDSWHSPLRSENDDSAE--------- 189
           K ++   +  SK ++++SS+ +   S    +      +HSPLRSE  D  +         
Sbjct: 6   KAQTERANQQSKGAMKKSSSRNSDSSGQMESPHSPLRFHSPLRSEAGDPPDTPPYESPVN 65

Query: 190 ------NNCRSIVVVDKYSSPGKSNIPAAVENSEKPTSENLDSPASPHTASPAVVGLNKF 351
                 +N R+IV V+K      +N+     +  K   +N  +PA P    P  + +N+ 
Sbjct: 66  SPEKQPDNSRAIVAVEK------ANLNHYSSDHHKKPHQNATAPAKP----PLPMYINRA 115

Query: 352 VREETPSAVKKVGPVSGG 405
            +EE P +V KVGPV+GG
Sbjct: 116 TKEEAPPSVTKVGPVAGG 133


Top