BLASTX nr result
ID: Rehmannia25_contig00023759
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00023759
(967 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623... 92 4e-16
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 89 2e-15
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo... 89 3e-15
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 89 3e-15
gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi... 89 3e-15
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 87 7e-15
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617... 86 3e-14
gb|EMJ07683.1| hypothetical protein PRUPE_ppa019056mg, partial [... 86 3e-14
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S... 86 3e-14
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 85 5e-14
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 84 6e-14
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia... 82 3e-13
ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein A... 80 9e-13
ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A... 79 2e-12
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 77 8e-12
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612... 77 1e-11
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617... 77 1e-11
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [... 77 1e-11
ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein A... 77 1e-11
gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [... 77 1e-11
>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
Length = 441
Score = 91.7 bits (226), Expect = 4e-16
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 8/296 (2%)
Frame = -2
Query: 915 WKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLCP 736
W ++W +LP +I F WR + LP NL RR + C C + H C
Sbjct: 122 WNVIWAAELPEKIKIFMWRAVKNLLPTTSNLWRRKIVGSPICRRCGVKNEDVIHALLDCK 181
Query: 735 AVTQVWLFAGLSDLISLFQQPCGVLWAREILINSPEHISAIFLTICSSIWYGLNLKSFED 556
+VW AG ++ I Q + EI + + + +C +IWY NL FE+
Sbjct: 182 VAKKVWRNAGCAEEIEKLVQQDLMAVLVEIQRKKGKKELELIVVLCWTIWYSRNLFIFEN 241
Query: 555 QPFSPHAIVASAKHTLLTFRMAKLWPERPSHKLNEADLTAR-----PPP--GIHIYFDGA 397
+ +A A+ L +FR K +PS K+ E R PPP I D A
Sbjct: 242 KREDSQLSIARAEANLDSFRRIK----KPSSKILEKQQRNRKQVWNPPPCGWFKINVDAA 297
Query: 396 VSNHGEVAGVGVFILGENGQFL-QGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPHSNVS 220
V+ ++AG+GV I NG+ + + +SF +S+ S +
Sbjct: 298 VNVKDQIAGLGVIIRNSNGEVVAAAIQRSFFQLSSTHMEAEAVILGIKSAQRA-GFSPMI 356
Query: 219 FLGDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVAHELA 52
DS ++ S + I+ DI +++ + + + PR N+ AH+LA
Sbjct: 357 IETDSQEVVDLTLSKKVSITETSWIIADIQESIQSSNQFSIQYTPRECNVTAHDLA 412
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 89.4 bits (220), Expect = 2e-15
Identities = 79/309 (25%), Positives = 126/309 (40%), Gaps = 4/309 (1%)
Frame = -2
Query: 915 WKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLCP 736
WK LWKL +P +I HF WR+ TL NL R + C++C + + HLFF C
Sbjct: 1302 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCK 1361
Query: 735 AVTQVWLFAGLSDLISLFQQPCGVLWAREILINSPEHISAIFLTICSSIWYGLNLKSFED 556
V +VW L +L S+ +Q + + PE+ + W N
Sbjct: 1362 PVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPENERTSAIVCLWQWWKERNEVREGG 1421
Query: 555 QPFSPHAIVASAKHTLLT--FRMAKLWPERPSHKLNEADLTARPPPG-IHIYFDGAVSNH 385
P SP A H +++ ++ + S + E + RPP + I DGA S++
Sbjct: 1422 IPRSP----AELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTDGAYSSN 1477
Query: 384 GEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPHSNVSFLGDS 205
+ G G I + G LQ + + + S S + DS
Sbjct: 1478 MKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIELETDS 1537
Query: 204 AVIISAAKGVTDSPPDCEPILMDIVH-LLKNYHHVGLFWIPRLENIVAHELAYFAKHNRC 28
++ A + + + ++++I H +L +H + + PR N VAHELA + N
Sbjct: 1538 MMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFSVSYSPRSCNKVAHELAAYG-CNLQ 1596
Query: 27 TADSWFRLP 1
T SW P
Sbjct: 1597 TVSSWAGCP 1605
>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
Length = 639
Score = 89.0 bits (219), Expect = 3e-15
Identities = 81/310 (26%), Positives = 129/310 (41%), Gaps = 5/310 (1%)
Frame = -2
Query: 915 WKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLCP 736
WK LWKL +P +I HF WR+ TL NL R + C++C + + HLFF C
Sbjct: 242 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFKCK 301
Query: 735 AVTQVWLFAGLSDLISLFQQPCGVLWAREILINSPEHISAIFLTICSSIWYGLNLKSFED 556
V +VW L +L S+ +Q + + PE I +C W+ + E
Sbjct: 302 PVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPE-IERTSAIVCLWQWWKERNEVREG 360
Query: 555 Q-PFSPHAIVASAKHTLLT--FRMAKLWPERPSHKLNEADLTARPPPG-IHIYFDGAVSN 388
P SP A H +++ ++ + S + E + RPP + I DGA S+
Sbjct: 361 GIPRSP----AELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTDGAYSS 416
Query: 387 HGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPHSNVSFLGD 208
+ + G G I + G LQ + + + S S + D
Sbjct: 417 NMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIELETD 476
Query: 207 SAVIISAAKGVTDSPPDCEPILMDIVH-LLKNYHHVGLFWIPRLENIVAHELAYFAKHNR 31
S ++ A + + + ++++I H +L +H + + PR N VAHELA + N
Sbjct: 477 SMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFSVSYSPRSCNKVAHELAAYG-CNL 535
Query: 30 CTADSWFRLP 1
T SW P
Sbjct: 536 QTVSSWAGCP 545
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 89.0 bits (219), Expect = 3e-15
Identities = 81/310 (26%), Positives = 129/310 (41%), Gaps = 5/310 (1%)
Frame = -2
Query: 915 WKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLCP 736
WK LWKL +P +I HF WR+ TL NL R + C++C + + HLFF C
Sbjct: 1275 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFKCK 1334
Query: 735 AVTQVWLFAGLSDLISLFQQPCGVLWAREILINSPEHISAIFLTICSSIWYGLNLKSFED 556
V +VW L +L S+ +Q + + PE I +C W+ + E
Sbjct: 1335 PVKKVWQALNLEELRSMLEQQTSGKNVLQSIYCRPE-IERTSAIVCLWQWWKERNEVREG 1393
Query: 555 Q-PFSPHAIVASAKHTLLT--FRMAKLWPERPSHKLNEADLTARPPPG-IHIYFDGAVSN 388
P SP A H +++ ++ + S + E + RPP + I DGA S+
Sbjct: 1394 GIPRSP----AELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTDGAYSS 1449
Query: 387 HGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPHSNVSFLGD 208
+ + G G I + G LQ + + + S S + D
Sbjct: 1450 NMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIELETD 1509
Query: 207 SAVIISAAKGVTDSPPDCEPILMDIVH-LLKNYHHVGLFWIPRLENIVAHELAYFAKHNR 31
S ++ A + + + ++++I H +L +H + + PR N VAHELA + N
Sbjct: 1510 SMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFSVSYSPRSCNKVAHELAAYG-CNL 1568
Query: 30 CTADSWFRLP 1
T SW P
Sbjct: 1569 QTVSSWAGCP 1578
>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
Length = 561
Score = 89.0 bits (219), Expect = 3e-15
Identities = 79/309 (25%), Positives = 126/309 (40%), Gaps = 4/309 (1%)
Frame = -2
Query: 915 WKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLCP 736
WK LWKL +P +I HF WR+ TL NL R + C++C + + HLFF C
Sbjct: 242 WKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCK 301
Query: 735 AVTQVWLFAGLSDLISLFQQPCGVLWAREILINSPEHISAIFLTICSSIWYGLNLKSFED 556
V +VW L +L S+ +Q + + PE+ + W N
Sbjct: 302 PVKKVWQALNLEELRSMLKQQTSGKNVLQSIYCRPENERTSAIVCLWQWWKERNEVREGG 361
Query: 555 QPFSPHAIVASAKHTLLT--FRMAKLWPERPSHKLNEADLTARPPPG-IHIYFDGAVSNH 385
P SP A H +++ ++ + S + E + RPP + I DGA S++
Sbjct: 362 IPRSP----AELSHLIMSQAGEFVRMNVKEKSPRTGECAVWRRPPLNFVKINTDGAYSSN 417
Query: 384 GEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPHSNVSFLGDS 205
+ G G I + G LQ + + + S S + DS
Sbjct: 418 MKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIELETDS 477
Query: 204 AVIISAAKGVTDSPPDCEPILMDIVH-LLKNYHHVGLFWIPRLENIVAHELAYFAKHNRC 28
++ A + + + ++++I H +L +H + + PR N VAHELA + N
Sbjct: 478 MMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFSVSYSPRSCNKVAHELAAYG-CNLQ 536
Query: 27 TADSWFRLP 1
T SW P
Sbjct: 537 TVSSWAGCP 545
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 87.4 bits (215), Expect = 7e-15
Identities = 69/294 (23%), Positives = 111/294 (37%), Gaps = 3/294 (1%)
Frame = -2
Query: 915 WKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLCP 736
WK +W ++LP ++ F WR LP ENL +R C C++ H C
Sbjct: 1016 WKAVWSMELPEKMKIFMWRAARNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCK 1075
Query: 735 AVTQVWLFAGLSDLISLFQQPCGVLWAREILINSPEHISAIFLTICSSIWYGLNLKSFED 556
A ++W A S IS Q + + E+ + + + C +IW+ N + FE
Sbjct: 1076 AARKIWYHATSSVQISNAQNQDILEFIYEVWSTWGKTKAEQTIAFCWAIWFARNKRIFEG 1135
Query: 555 QPFSPHAIVASAKHTLLTFRMAKLWPERPSHKLNE-ADLTARPPPG--IHIYFDGAVSNH 385
+ P A A A+ L + A+ H + PPPG + + D A++N
Sbjct: 1136 KKSDPRASAAKAESLLEAYHRARKPDASHIHNVKRIVQKKWEPPPGNFLKVNVDAAINNR 1195
Query: 384 GEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPHSNVSFLGDS 205
+VAG+G I +G+ + +K L S + D
Sbjct: 1196 DQVAGLGAVIKDPSGKIVAAGTKQVPLREGVSFAEAEAMEWGLQIARELSLSALIMETDC 1255
Query: 204 AVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVAHELAYFA 43
++ S ++ DI +++ V IPR N AH LA A
Sbjct: 1256 KEVVDLLNNTKGSRTGISWVISDIQEQRRDFKEVKFRHIPRTCNTCAHSLAKLA 1309
>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
Length = 1238
Score = 85.5 bits (210), Expect = 3e-14
Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 8/296 (2%)
Frame = -2
Query: 915 WKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLCP 736
W ++W +LP +I F WR + LP NL RR + C C + H C
Sbjct: 919 WNVIWAAELPEKIKIFMWRAVKNLLPTASNLWRRKIVGSPICRRCGVKNEDVIHALLDCK 978
Query: 735 AVTQVWLFAGLSDLISLFQQPCGVLWAREILINSPEHISAIFLTICSSIWYGLNLKSFED 556
+VW AG ++ I Q + EI + + + +C +IWY NL FE+
Sbjct: 979 VAKKVWRNAGCAEEIEKLVQQDLMAVLVEIQRKKGKKELELIVVLCWTIWYSQNLFIFEN 1038
Query: 555 QPFSPHAIVASAKHTLLTFRMAKLWPERPSHKLNEADLTAR-----PPPG--IHIYFDGA 397
+ +A A+ + +F+ K +P K+ E R PPP I D A
Sbjct: 1039 KREDSQLSIARAEANMDSFKRIK----KPFSKILEKQQRNRKQVWNPPPSGWFKINVDAA 1094
Query: 396 VSNHGEVAGVGVFILGENGQFL-QGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPHSNVS 220
V+ ++AG+GV I NG+ + + +SF +S+ S +
Sbjct: 1095 VNVKDQIAGLGVIIRNSNGEVVAAAIQRSFFQLSSTHMEAEAVILGIKSAQRA-GFSPMI 1153
Query: 219 FLGDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVAHELA 52
DS ++ + I+ DI +++ + + + PR N+ AH+LA
Sbjct: 1154 IETDSQEVVDLTLSKKVRIIETSWIIADIQESIQSSNQFSIQYTPRECNVTAHDLA 1209
>gb|EMJ07683.1| hypothetical protein PRUPE_ppa019056mg, partial [Prunus persica]
Length = 298
Score = 85.5 bits (210), Expect = 3e-14
Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 5/271 (1%)
Frame = -2
Query: 798 DCCLLCDQPAIETSHLFFLCPAVTQVWLFAGLSDLISLFQQPCGVL--WAREILINSPEH 625
D C+ C H+ +CP W + L+ Q C + W RE+L + +
Sbjct: 3 DMCMFCGDITESALHVLAMCPFAVATWNISLLTR--HAHQVHCHTMKDWLREMLEGTSKA 60
Query: 624 ISAIFLTICSSIWYGLNLKSFEDQPFSPHAIVASAKHTLLTFRMAKLWPERPSHKLNEAD 445
+T+ +IW N ++ SPH +V A+ + F A P + + ++ +
Sbjct: 61 QRDHIITLLWAIWGNRNALLWQGVQRSPHEVVGFAQQYVHEFITANDTPSKVTDRVRDPV 120
Query: 444 LTARPPPG-IHIYFDGAVSNHGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXX 268
A PP G + FDGA VGV +G F+ ++KS + +
Sbjct: 121 RWAAPPSGRLKFNFDGAFDPTSGRGAVGVVARDADGGFVAAVAKSVGEVLSAEHAEILAA 180
Query: 267 XXXXXXXSTLPHSNVSFLGDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWI 88
+L ++ F GDSAV++SA K + I+ D+ HL + + +
Sbjct: 181 REGVALALSLGTASPIFEGDSAVVVSAIKRAGQDYSNIGTIVEDVKHLQQQFPSSLFQFT 240
Query: 87 PRLENIVAHELAYFAKHNRCTADS--WFRLP 1
PR N VAH LA F HN D+ WF +P
Sbjct: 241 PREANGVAHRLARFGLHN---VDNFIWFEVP 268
>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
gi|241920472|gb|EER93616.1| hypothetical protein
SORBIDRAFT_01g011130 [Sorghum bicolor]
Length = 463
Score = 85.5 bits (210), Expect = 3e-14
Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 7/302 (2%)
Frame = -2
Query: 936 GATPPPL--WKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIE 763
G+ P PL WK +WKL P++I HF WR L + P +NL RR + C +C+Q +
Sbjct: 133 GSNPGPLSLWKRVWKLSCPNKIKHFLWRFLHNSHPLRDNLIRRGMEIVPRCPVCNQVGED 192
Query: 762 TSHLFFLCPAVTQVWLFAGLS---DLISLFQQPCGVLWAREILINSPEHISAIFLTICSS 592
HLFF C QVW GLS ++++ F P V+ E ++ + E + +
Sbjct: 193 GGHLFFKCGMARQVWELLGLSTEREVLANFYTPIDVV---EFILRASESRKLMMIVALWY 249
Query: 591 IWYGLNLKSFEDQPFSPHAIVASAKHTLLTFRMAKLWPERPSHKLNEADLTARPPPGI-H 415
W N ED+ SP + + + R + +++ + ++PP I
Sbjct: 250 TWSERNAIREEDRRRSPQTLARCVELYVQEMRTTETTANPTANQEQQQYKWSKPPVDILK 309
Query: 414 IYFDGAVSNHGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLP 235
+ DG+ S GV I G + + P + L
Sbjct: 310 LNCDGSFSPETRAGSWGVLIRDHEGDVIMSGRGRVNHLMTPMQAELIACLQGVQLAANLG 369
Query: 234 HSNVSFLGDSAVIISAAKGVTDSPPDCEPILMDIVHLLK-NYHHVGLFWIPRLENIVAHE 58
+ D+ ++ A K + ++ +I L++ N+ V + R+ N AHE
Sbjct: 370 IGRLILETDALEVVKAIKTSAYNYAAVGYLVEEIKSLIELNFISVECVFACRICNRAAHE 429
Query: 57 LA 52
LA
Sbjct: 430 LA 431
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 84.7 bits (208), Expect = 5e-14
Identities = 77/314 (24%), Positives = 111/314 (35%), Gaps = 12/314 (3%)
Frame = -2
Query: 918 LWKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLC 739
LWK+ W L LP ++ F WR L LP ENL +R C C SH+ C
Sbjct: 445 LWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIEC 504
Query: 738 PAVTQVWLFAGL---------SDLISLFQQPCGVLWAREILINSPEHISAIFLTICSSIW 586
A ++W A L D S Q+ +W+R S + + + C IW
Sbjct: 505 KAARKIWDLAPLIVQPSKDHNQDFFSAIQE----MWSR-----SSTAEAELMIVYCWVIW 555
Query: 585 YGLNLKSFEDQPFSPHAIVASAKHTLLTFRMAKLWPERPSHKLNEADLTARPPPG---IH 415
N FE + + A A L ++ K D PP +
Sbjct: 556 SARNKFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLK 615
Query: 414 IYFDGAVSNHGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLP 235
+ D AVS + G+G + G+ L K Q + +
Sbjct: 616 LNVDAAVSTKXQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWGLQVANQIS 675
Query: 234 HSNVSFLGDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVAHEL 55
S++ D ++ S + IL D+ K++ V +IPR N AH L
Sbjct: 676 SSSLIVESDCKEVVELLNNTKGSRTEIHWILSDVRRESKDFKQVQFSFIPRTCNTYAHAL 735
Query: 54 AYFAKHNRCTADSW 13
A FA N T D W
Sbjct: 736 AKFALRNSST-DVW 748
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 84.3 bits (207), Expect = 6e-14
Identities = 77/314 (24%), Positives = 110/314 (35%), Gaps = 12/314 (3%)
Frame = -2
Query: 918 LWKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLC 739
LWK+ W L LP ++ F WR L LP ENL +R C C SH+ C
Sbjct: 1132 LWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIEC 1191
Query: 738 PAVTQVWLFAGL---------SDLISLFQQPCGVLWAREILINSPEHISAIFLTICSSIW 586
A ++W A L D S Q+ +W+R S + + + C IW
Sbjct: 1192 KAARKIWDLAPLIVQPSKDHNQDFFSAIQE----MWSR-----SSTAEAELMIVYCWVIW 1242
Query: 585 YGLNLKSFEDQPFSPHAIVASAKHTLLTFRMAKLWPERPSHKLNEADLTARPPPG---IH 415
N FE + + A A L ++ K D PP +
Sbjct: 1243 SARNKFIFEGKKSDSRFLAAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLK 1302
Query: 414 IYFDGAVSNHGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLP 235
+ D AVS + G+G + G+ L K Q + +
Sbjct: 1303 LNVDAAVSTKDQKVGLGAIVRDAEGKILAVGIKQAQFRERVSLAEAEAIHWGLQVANQIS 1362
Query: 234 HSNVSFLGDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVAHEL 55
S++ D ++ S + IL D+ K + V +IPR N AH L
Sbjct: 1363 SSSLIVESDCKEVVELLNNTKGSRTEIHWILSDVRRESKEFKQVQFSFIPRTCNTYAHAL 1422
Query: 54 AYFAKHNRCTADSW 13
A FA N T D W
Sbjct: 1423 AKFALRNSST-DVW 1435
>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
thaliana] gi|7269807|emb|CAB79667.1| putative protein
[Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
putative reverse transcriptase/RNA-dependent DNA
polymerase [Arabidopsis thaliana]
gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 575
Score = 82.0 bits (201), Expect = 3e-13
Identities = 80/320 (25%), Positives = 129/320 (40%), Gaps = 18/320 (5%)
Frame = -2
Query: 957 SGPLISSGATPPPLWKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCD 778
S P S + P+++ +WK Q +I HF W+ LS +LP LA RHLS C+ C
Sbjct: 240 SSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCP 299
Query: 777 QPAIETSHLFFLCPAVTQVWLFAGLSDLISLFQQPCGVLWAREILIN----------SP- 631
+HL F C FA L+ IS P G WA I +N +P
Sbjct: 300 SCKETVNHLLFKC-------TFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQ 352
Query: 630 -EHISAIFLTICSSIWYGLNLKSFEDQPFSPHAIVASAKHTLLTFRM---AKLWPERPSH 463
E S + + +W N F + F+ ++ A+ L +R+ A+ +P
Sbjct: 353 WEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKP-- 410
Query: 462 KLNEADLTA-RPPP--GIHIYFDGAVSNHGEVAGVGVFILGENGQFLQGLSKSFQGISNP 292
++N + RPPP + D + E G+G + E G+ +++ + +
Sbjct: 411 QVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSV 470
Query: 291 XXXXXXXXXXXXXXXSTLPHSNVSFLGDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNY 112
S ++ V F DS V+I + P +P + D+ LL +
Sbjct: 471 LEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNN-DEIWPSLKPTIQDLQRLLSQF 529
Query: 111 HHVGLFWIPRLENIVAHELA 52
V +IPR N +A +A
Sbjct: 530 TEVKFVFIPREGNTLAERVA 549
>ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 393
Score = 80.5 bits (197), Expect = 9e-13
Identities = 72/307 (23%), Positives = 114/307 (37%), Gaps = 6/307 (1%)
Frame = -2
Query: 942 SSGATPPP---LWKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQP 772
SSG P WK +W+ +P ++ F WRL +P L+RR C+ C
Sbjct: 39 SSGTVGPGSGGCWKKIWQANVPPKVRSFIWRLCLEVIPTRAALSRRLFITDVRCIFCGNE 98
Query: 771 AIETSHLFFLCPAVTQVWLFAGLSDLISLFQQPCGVLWAREILIN-SPEHISAIFLTICS 595
HLF CP V W L + +W ++ N S + + F+ +
Sbjct: 99 VETGLHLFRDCPVVQSFWKHNPLHLRSYSYPGSTLAVWVFLVMDNLSMQQLEGFFMALW- 157
Query: 594 SIWYGLNLKSFEDQPFSPHAIVASAKHTLLTFRMAKLWPERPSHKLN--EADLTARPPPG 421
++W N + +P + A L ++ +PS K+ A P
Sbjct: 158 TVWIERNNMIWRGGSCNPSNMSVWAMQLLEEYKKVH---TKPSVKMKRPRAKWCCPPSGR 214
Query: 420 IHIYFDGAVSNHGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXST 241
+ + DGA G G+GV + E G + LS+ S+
Sbjct: 215 LKLNIDGAYLEDGRKGGIGVVVRNEYGNCVAALSRHMPYASSAMHMEAEALRASLLIAIH 274
Query: 240 LPHSNVSFLGDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVAH 61
V GD A+++ A + IL D H ++ + + L I R N VAH
Sbjct: 275 QGWDEVEIEGDCAIVMKALANTDGDVIEVSSILSDCRHYMEAFRLILLRHIYREANGVAH 334
Query: 60 ELAYFAK 40
LA+FA+
Sbjct: 335 RLAHFAR 341
>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 494
Score = 79.3 bits (194), Expect = 2e-12
Identities = 61/215 (28%), Positives = 89/215 (41%), Gaps = 10/215 (4%)
Frame = -2
Query: 915 WKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLCP 736
W ++WKL LP++I F WR LP ENL +R + H C C T H C
Sbjct: 208 WSVIWKLTLPAKIKIFIWRAAKNLLPTAENLWKRKIVHEAYCKRCGNRVENTLHALITCK 267
Query: 735 AVTQVWLFAGLSDLISLFQQP-----CGVLWAREILINSPEHISAIFLTICSSIWYGLNL 571
A +VW LS + S FQ+ G L +++ E + +TI IWY N
Sbjct: 268 AAKKVW---QLSPMASSFQEMGNPDILGDLGGKKLSRADME----MLMTILWVIWYDRNK 320
Query: 570 KSFEDQPFSPHAIVASAKHTLLTFR---MAKLWPERPSHKLNEADLTARPPPGIHIYFDG 400
FED P +A A+ FR ++ E KL + T P + + D
Sbjct: 321 LVFEDLKLDPRLSMAKAEAINEAFRRTQFPEITNEGKLQKLKQTVWTPPPQGWLKLNVDA 380
Query: 399 AVSNHGEVAGVGVFILGENGQFLQGLSKS--FQGI 301
++ AG+G I G+ + K+ F G+
Sbjct: 381 TTDSNKSCAGLGAIIRDSTGKCMAAGIKTVKFSGV 415
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 77.4 bits (189), Expect = 8e-12
Identities = 73/304 (24%), Positives = 117/304 (38%), Gaps = 14/304 (4%)
Frame = -2
Query: 921 PLWKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFL 742
P+++ +WKL +P +I HF WR ++ L NLA RHL+ C+ C +HL F
Sbjct: 1049 PIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFK 1108
Query: 741 CPAVTQVWLFAGLSDLISLFQQPCGVLWAREILINSPEHIS------------AIFLTIC 598
CP FA L+ IS P G WA + N +S A+ I
Sbjct: 1109 CP-------FARLTWAISPLPAPPGGEWAESLFRNMHHVLSVHKSQPEESDHHALIPWIL 1161
Query: 597 SSIWYGLNLKSFEDQPFSPHAIVASAKHTLLTFRMAKLWPERPSHKLNEADLTARPPP-- 424
+W N F+ + F+ ++ A + + K + + + + +PP
Sbjct: 1162 WRLWKNRNDLVFKGREFTAPQVILKATEDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHG 1221
Query: 423 GIHIYFDGAVSNHGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXS 244
+ DGA S GVG + G+ L ++ + S
Sbjct: 1222 WVKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLS 1281
Query: 243 TLPHSNVSFLGDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVA 64
+ V F DS ++S + D P P + DI +LL+++ V + R N VA
Sbjct: 1282 RFNYRRVIFESDSQYLVSLIQNEMDI-PSLAPRIQDIRNLLRHFEEVKFQFTRREGNNVA 1340
Query: 63 HELA 52
A
Sbjct: 1341 DRTA 1344
>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
Length = 589
Score = 77.0 bits (188), Expect = 1e-11
Identities = 77/324 (23%), Positives = 124/324 (38%), Gaps = 12/324 (3%)
Frame = -2
Query: 951 PLISSGATPPPLWKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQP 772
P S+GA P W+ +W+L LP +I F W+ LP ENL RR + C LC
Sbjct: 261 PAGSTGA--PQGWQHIWRLNLPEKIKIFVWKATKNLLPMAENLWRRKVLKEPTCHLCKAG 318
Query: 771 AIETSHLFFLCPAVTQVWLFAGLSDLI------SLFQQPCGVL--WAREILINSPEHISA 616
+ H C ++W L + + + G + WA+ + ++++
Sbjct: 319 CEDVFHALMECRVARKIWKCTHLENEVKSVIREDMLSVMIGAMNNWAK----SEVDYVAT 374
Query: 615 IFLTICSSIWYGLNLKSFEDQPFSPHAIVASAKHTLLTFRMAKLWPERPSHK--LNEADL 442
I+ W+ N F+ + P VA K T++ A+ ER SH+ +
Sbjct: 375 IWWV----AWHARNKLLFQGKKLDPIGSVAKGK-TVMEVYQAQQVKERESHRNTVKGKMQ 429
Query: 441 TARPPPG--IHIYFDGAVSNHGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXX 268
PPP + + D AV + AG+GV I GQ L KS N
Sbjct: 430 IWTPPPNNKVKVNVDAAVKEDRKSAGLGVVIRNHRGQVLAAAVKSMNFQGNIAIAEAHAV 489
Query: 267 XXXXXXXSTLPHSNVSFLGDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWI 88
L S+V D + A + + + DI +++ + +
Sbjct: 490 KWGMEVAKDLSLSSVIIETDCKNVADLANKKVSNRTEILWTMSDIHKSTQDFQLISFQHV 549
Query: 87 PRLENIVAHELAYFAKHNRCTADS 16
PR N AH + AK C+++S
Sbjct: 550 PRKCNDFAH---FLAKRALCSSES 570
>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
Length = 440
Score = 77.0 bits (188), Expect = 1e-11
Identities = 67/295 (22%), Positives = 111/295 (37%), Gaps = 6/295 (2%)
Frame = -2
Query: 918 LWKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLC 739
+W LW+L++PS++ HF WR L+ LP ENL ++++ C+ C + H+ C
Sbjct: 122 IWNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESICHILLQC 181
Query: 738 PAVTQVWLFAGLSDLISLFQQPCGVLWAREILINSPE-HISAIFLTICSSIWYGLNLKSF 562
P W ++ I F +L E L N + + + IC S+W N +
Sbjct: 182 PFARTCW----MTSSIGFFGDGSNLLLWLEALFNRYSLEQTQLAVMICWSLWQNRNDMVW 237
Query: 561 EDQPFSPHAIVASAKHTLLTFRMAKLWP---ERPSHKLNEADLTARPPPG--IHIYFDGA 397
+ ++ SA H L +++ + +PS + + PP + D A
Sbjct: 238 RGKTSGVQQLLNSAGHFLFQWQLVRKQQFLFSQPS-PIGHGAICWEPPVAGRLKCNVDVA 296
Query: 396 VSNHGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPHSNVSF 217
+ G G I N F+ S G + L SNV+
Sbjct: 297 LFAFRGYIGFGNVIRDSNCAFMAARCCSIPGRFSARDAEALGVREALSWIKQLQLSNVTI 356
Query: 216 LGDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVAHELA 52
D + +A P I+ D L + V ++ R N VAH +A
Sbjct: 357 EMDCLTVYNALVNNLSGPSSFSLIIEDCRALSNSIRDVSFSFVRRSANSVAHYVA 411
>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 77.0 bits (188), Expect = 1e-11
Identities = 81/318 (25%), Positives = 118/318 (37%), Gaps = 12/318 (3%)
Frame = -2
Query: 918 LWKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLC 739
+WK +W ++ F WR++ LP NL RR + C +C+Q H FLC
Sbjct: 603 VWKDIWASPTLPKVKFFLWRMMVRALPTKLNLYRRRIISSPFCPICNQYEESEEHAIFLC 662
Query: 738 PAVTQVWLFAGLSDLISLFQQPCGVLWAREIL----INSPEHISAIFLT--ICSSIWYGL 577
P VW + L+ ++ W +L + E + + L I IW
Sbjct: 663 PWTQAVWFGSPLNYRVNPQSITTFDRWFTGLLNSQMFSKSERVWVLSLVSFISWEIWKAR 722
Query: 576 NLKSFEDQPFSPHAIV---ASAKHTLLTFRMAKLWPERPSHKLNEADLTARPP--PGIHI 412
FED P +V ASA R ++ + ++ +PP I I
Sbjct: 723 CKFLFEDITIDPRCVVERAASAAEEFDVLRRHEISTRNGAGVFSQPTDIWKPPVNGAIKI 782
Query: 411 YFDGAVSNHGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPH 232
FD A NH AG+GV + N F G + S + ++ S +
Sbjct: 783 NFDAAWKNH--EAGLGVVMRNHNKDFCYGFA-SKRCCNSALNAETEAAIEALRCASLRGY 839
Query: 231 SNVSFLGDSAVIISAAKG-VTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVAHEL 55
S + DS V+I + KG V P+L +I L + V WIPR N AH
Sbjct: 840 SKIEMESDSKVLIDSIKGNVCTKAWTILPLLDEIRRLSAGFSDVEWCWIPRGANRAAHVT 899
Query: 54 AYFAKHNRCTADSWFRLP 1
A C W P
Sbjct: 900 AAIGLRAVC-PQGWANQP 916
>ref|XP_006487438.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 335
Score = 76.6 bits (187), Expect = 1e-11
Identities = 70/297 (23%), Positives = 111/297 (37%), Gaps = 6/297 (2%)
Frame = -2
Query: 915 WKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLCP 736
W ++WKL LP +I F W+ LP ENL +R + C C H+ C
Sbjct: 17 WSIIWKLSLPEKIKIFVWKATKNLLPTAENLCKRGIVQEAHCKRCGNKVENILHVLVTCK 76
Query: 735 AVTQVWLFAGLSDLISLFQQP--CGVLWAREILINSPEHISAIFLTICSSIWYGLNLKSF 562
A +VW + ++D + G L + +++ + + L + IWY N F
Sbjct: 77 AAKKVWQRSPVADAVHKIDSSNLFGELTKLQRSLSNDDF--ELLLVLLWIIWYARNKFVF 134
Query: 561 EDQPFSPHAIVASAKHTLLTFRMAKLWPERPSHK---LNEADLTARPPP-GIHIYFDGAV 394
E P VA A+ ++ + +PE K E + A PPP + I D A+
Sbjct: 135 EGMKIDPGISVAKAEAIKEAYKRTQ-FPEMLVGKNSLRQEQNKWAPPPPRWVKINVDAAI 193
Query: 393 SNHGEVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPHSNVSFL 214
+ +G+G I +G+ KS + V
Sbjct: 194 DAKSKCSGLGAVIKDPSGKCFVAAVKSVTSKGDVLLAEAEADEWGTYLAKEEGMQAVILE 253
Query: 213 GDSAVIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVAHELAYFA 43
DS + + + I+ DI L+ + H +IPR N AH+LA A
Sbjct: 254 TDSKATVDLINNNGNYMTEVHWIISDIQSLMSQFSHFVAKFIPRSCNTCAHKLAKIA 310
>gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [Prunus persica]
Length = 887
Score = 76.6 bits (187), Expect = 1e-11
Identities = 74/307 (24%), Positives = 114/307 (37%), Gaps = 1/307 (0%)
Frame = -2
Query: 918 LWKMLWKLQLPSRILHFAWRLLSYTLPCPENLARRHLSHGDCCLLCDQPAIETSHLFFLC 739
LW+ LWK + +++ F W + LP +NLA++ + D C+ C T H+ C
Sbjct: 573 LWRTLWKANILAKVKVFWWCVCLNILPTHDNLAQKKVPINDGCVHCGLMPETTLHVLRDC 632
Query: 738 PAVTQVWLFAGLSDLISLFQQPCGVLWAREILINSPEHISAIFLTICSSIWYGLNLKSFE 559
WL + L L L P W + F + S+W N +
Sbjct: 633 N-----WLSSSLGCLRDLEGMPSVKDWVSHCFRSLTPTDLGFFFMMGWSLWEQRNGLPWN 687
Query: 558 DQPFSPHAIVASAKHTLLTFRMAKLWPERPSHKLNEADLTARPP-PGIHIYFDGAVSNHG 382
++ P + A + LL + P ++ +PP + I DGA +
Sbjct: 688 NKSSCPSLVGHIAHNRLLEYLQVNRPGGTPCSNQDQVQRWTKPPMRHLKINVDGAWNAIT 747
Query: 381 EVAGVGVFILGENGQFLQGLSKSFQGISNPXXXXXXXXXXXXXXXSTLPHSNVSFLGDSA 202
+ GVGV I G F+ G ++ F + + +N+ F DS
Sbjct: 748 KSGGVGVVIRDSAGAFIAGRARKFDNVFSALQIEALAAREGVVLAVERGLTNICFESDSL 807
Query: 201 VIISAAKGVTDSPPDCEPILMDIVHLLKNYHHVGLFWIPRLENIVAHELAYFAKHNRCTA 22
I++A + PIL D LL G + R N H +A FA H T
Sbjct: 808 QIVTALGCSSLDRSFIGPILEDSKFLLLQITGEGFAHVCRTANEATHRIARFALHLE-TP 866
Query: 21 DSWFRLP 1
SWF P
Sbjct: 867 ISWFEGP 873