BLASTX nr result
ID: Rehmannia25_contig00023580
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00023580
(1340 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340743.1| PREDICTED: pentatricopeptide repeat-containi... 362 e-111
ref|XP_004233739.1| PREDICTED: pentatricopeptide repeat-containi... 350 e-107
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi... 318 9e-99
emb|CBI29825.3| unnamed protein product [Vitis vinifera] 318 9e-99
ref|XP_002308024.2| pentatricopeptide repeat-containing family p... 276 5e-86
gb|EOY31969.1| Pentatricopeptide repeat (PPR) superfamily protei... 312 8e-86
ref|XP_002529510.1| pentatricopeptide repeat-containing protein,... 302 1e-82
ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containi... 272 2e-82
ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containi... 270 1e-81
ref|XP_006492928.1| PREDICTED: pentatricopeptide repeat-containi... 303 1e-81
ref|XP_006421323.1| hypothetical protein CICLE_v10004347mg [Citr... 303 1e-81
gb|EMJ14826.1| hypothetical protein PRUPE_ppa002066mg [Prunus pe... 276 4e-77
ref|XP_002889252.1| pentatricopeptide repeat-containing protein ... 286 2e-75
gb|EPS65333.1| hypothetical protein M569_09443, partial [Genlise... 274 2e-74
ref|XP_004295543.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 271 3e-74
ref|NP_178072.1| pentatricopeptide repeat-containing protein [Ar... 280 8e-74
ref|XP_006389878.1| hypothetical protein EUTSA_v10018150mg [Eutr... 278 1e-73
ref|XP_006301385.1| hypothetical protein CARUB_v10021797mg [Caps... 272 1e-71
ref|XP_006848380.1| hypothetical protein AMTR_s00013p00202120 [A... 264 3e-71
gb|EXB51207.1| hypothetical protein L484_019198 [Morus notabilis] 254 1e-68
>ref|XP_006340743.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
[Solanum tuberosum]
Length = 775
Score = 362 bits (930), Expect(2) = e-111
Identities = 192/387 (49%), Positives = 260/387 (67%), Gaps = 4/387 (1%)
Frame = -1
Query: 1247 KLLHSPIFRSIKPQYXXXXXXXXXXXXXXXXXXXXXNEVLVLINSVHPIGPSLRKLDPFL 1068
KLLHSPIFRS+ + NEVL +I V P+ P+L KL FL
Sbjct: 2 KLLHSPIFRSVYSK-----------SFSTSREMAVSNEVLNIIERVDPLEPALDKLVRFL 50
Query: 1067 NREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRSGVLYSLMVDMLLGGDSGNSFDLY 888
II +L+ + +K+ + FRFFIWAA ++RF+S V +L+ DML D G FDLY
Sbjct: 51 CPNIISFILEEK---RKNPELGFRFFIWAAKRKRFQSWVPKNLIADML-AQDGG--FDLY 104
Query: 887 WSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXX 708
W+VLD+L+ + +++NAF LI GYW++ KAEKAVE FGRMKD++CKPN+ N
Sbjct: 105 WNVLDKLKFSGIPIASNAFAALIWGYWKVNKAEKAVEAFGRMKDFDCKPNIYTYNMILHI 164
Query: 707 XXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPS 528
VYN+MLK N + TFS+LIDGLCKSG T DAL LFDEMTERG+LPS
Sbjct: 165 AVQKDAILLALAVYNVMLKLNSQPNSSTFSILIDGLCKSGRTHDALALFDEMTERGVLPS 224
Query: 527 SITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFK 348
ITYTVILSGLC+AKRT DA++L ++MK GC PD TYNALL+GFCK G++DE L +
Sbjct: 225 KITYTVILSGLCQAKRTDDAYRLLNVMKTRGCRPDFVTYNALLNGFCKLGRVDETHALLR 284
Query: 347 SFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESR 168
SF ++G+ + I+G++C+IDG +R+KRI EA+ +F+K+F+ +VPD++LY+ MIRGLS +
Sbjct: 285 SFENEGYLMDIKGYTCLIDGFVRTKRIDEAQSVFKKLFEKNVVPDVVLYTTMIRGLSGAG 344
Query: 167 RLEDATNMFRDMIGKG----TVCWGRL 99
R+++A ++ RDM G+G T C+ L
Sbjct: 345 RVKEALSLLRDMTGRGVQPDTQCYNTL 371
Score = 67.8 bits (164), Expect(2) = e-111
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNGL+ EA+ IFN+MEKLGC PS VTFN LIDGLCK G+LE
Sbjct: 412 RNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELE 452
Score = 106 bits (265), Expect(2) = 2e-24
Identities = 65/268 (24%), Positives = 123/268 (45%), Gaps = 13/268 (4%)
Frame = -1
Query: 884 SVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXX 705
++L +E + + LI G+ R ++ ++A F ++ + N P++
Sbjct: 281 ALLRSFENEGYLMDIKGYTCLIDGFVRTKRIDEAQSVFKKLFEKNVVPDVVLYTTMIRGL 340
Query: 704 XXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSS 525
+ M + ++ LI G C G+ A L E++E P +
Sbjct: 341 SGAGRVKEALSLLRDMTGRGVQPDTQCYNTLIKGFCDVGILDQARSLQLEISENDCFPDT 400
Query: 524 ITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKS 345
TY++++ G+C+ +A +F+ M+ GC P T+N L+DG CK G+++EA ++F
Sbjct: 401 YTYSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELEEAHLMFYK 460
Query: 344 FR-----------DDGFKVGIRGFSC--MIDGLIRSKRIGEAEKLFQKVFDVGLVPDLIL 204
G + S MI+ L + +I +A KL ++ D G VP+++
Sbjct: 461 MEIGKNPSLFLRLSQGADRVLDSVSLQKMIEKLCETGKILKAYKLLMQLADCGFVPNIVT 520
Query: 203 YSIMIRGLSESRRLEDATNMFRDMIGKG 120
Y+I+I GL +S + A +F+++ KG
Sbjct: 521 YNILINGLCKSGIINGALKLFQELQVKG 548
Score = 33.9 bits (76), Expect(2) = 2e-24
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 126 KRNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKL 4
+R G + E+ ++F+ M K GC PSA + +L+ C+ G++
Sbjct: 564 QRVGRVDESFKLFDQMSKNGCMPSAEVYKSLMTWSCRRGQI 604
Score = 107 bits (266), Expect = 1e-20
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 14/197 (7%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+S++I G+C++G+ ++A +F+EM + G PS +T+ ++ GLCKA +AH +F M
Sbjct: 402 TYSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELEEAHLMFYKM 461
Query: 446 KNSGCTP--------------DSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRG 309
+ G P DS + +++ C+ G+I +A+ L D GF I
Sbjct: 462 E-IGKNPSLFLRLSQGADRVLDSVSLQKMIEKLCETGKILKAYKLLMQLADCGFVPNIVT 520
Query: 308 FSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMI 129
++ +I+GL +S I A KLFQ++ G PD I Y +I GL R++++ +F M
Sbjct: 521 YNILINGLCKSGIINGALKLFQELQVKGHFPDSITYGTLIDGLQRVGRVDESFKLFDQMS 580
Query: 128 GKGTVCWGRLNRFSMTW 78
G + + + MTW
Sbjct: 581 KNGCMPSAEVYKSLMTW 597
Score = 89.7 bits (221), Expect = 2e-15
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 5/167 (2%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI+GLCKSG+ AL+LF E+ +G P SITY ++ GL + R ++ KLF M
Sbjct: 520 TYNILINGLCKSGIINGALKLFQELQVKGHFPDSITYGTLIDGLQRVGRVDESFKLFDQM 579
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFML-FKSFRDDGFKVGIRGFSCMIDGLI-RSK 273
+GC P + Y +L+ C+ GQI AF L F+ R+ + G + GLI +
Sbjct: 580 SKNGCMPSAEVYKSLMTWSCRRGQISIAFSLWFQYLRNHAVRDG------EVIGLIEKHL 633
Query: 272 RIGEAEKLFQKVFDVGLVP---DLILYSIMIRGLSESRRLEDATNMF 141
G+ EK+ + + ++ L D Y+I + G+ + + +A +F
Sbjct: 634 EKGDLEKVVRGLLEIDLKRVDFDSSPYNIWLIGMCQECKPHEALKIF 680
Score = 88.2 bits (217), Expect = 7e-15
Identities = 72/321 (22%), Positives = 131/321 (40%), Gaps = 36/321 (11%)
Frame = -1
Query: 947 YSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFG 768
+S+++D L SG + D ++ DE+ + V S + V++ G + ++ + A
Sbjct: 193 FSILIDGLC--KSGRTHDAL-ALFDEMTERGVLPSKITYTVILSGLCQAKRTDDAYRLLN 249
Query: 767 RMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSG 588
MK C+P+ T++ L++G CK G
Sbjct: 250 VMKTRGCRPDFV-----------------------------------TYNALLNGFCKLG 274
Query: 587 MT-----------------------------------QDALRLFDEMTERGILPSSITYT 513
+A +F ++ E+ ++P + YT
Sbjct: 275 RVDETHALLRSFENEGYLMDIKGYTCLIDGFVRTKRIDEAQSVFKKLFEKNVVPDVVLYT 334
Query: 512 VILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDD 333
++ GL A R +A L M G PD+ YN L+ GFC G +D+A L ++
Sbjct: 335 TMIRGLSGAGRVKEALSLLRDMTGRGVQPDTQCYNTLIKGFCDVGILDQARSLQLEISEN 394
Query: 332 GFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDA 153
+S +I G+ R+ + EA +F ++ +G P ++ ++ +I GL ++ LE+A
Sbjct: 395 DCFPDTYTYSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELEEA 454
Query: 152 TNMFRDM-IGKGTVCWGRLNR 93
MF M IGK + RL++
Sbjct: 455 HLMFYKMEIGKNPSLFLRLSQ 475
>ref|XP_004233739.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
[Solanum lycopersicum]
Length = 753
Score = 350 bits (899), Expect(2) = e-107
Identities = 174/350 (49%), Positives = 246/350 (70%), Gaps = 4/350 (1%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EVL +I+ V P+ P+L +L FL +II +L+ + +K+ + FRFFIWAA ++RF+
Sbjct: 6 EVLNIIDRVDPLEPALDELVRFLCPDIISFILEEK---RKNPELGFRFFIWAAKRKRFQR 62
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
+ +L+ DML FDLYW+VLD+L+ + +++NAF LI GYW++ KAEKA+E
Sbjct: 63 WIPKNLIADML---SKDGGFDLYWNVLDKLKFSGIPIASNAFAALIWGYWKVNKAEKAIE 119
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
F RMKD++CKPN+ N VYN+MLK N + TFS+LIDGLC
Sbjct: 120 AFSRMKDFDCKPNIYTYNMILHIAVQKDAILLALAVYNVMLKLNSQPNSSTFSILIDGLC 179
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
KSG T DAL LFDEMTERG+LPS ITYTVILSGLC+AKRT DA++L ++MK GC PD
Sbjct: 180 KSGRTHDALALFDEMTERGVLPSKITYTVILSGLCQAKRTDDAYRLLNVMKTRGCKPDFV 239
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
TYNALL+GFCK G++DEA +L +SF ++G+ + I+G++C+IDG +R+KRI EA+ +F+ +
Sbjct: 240 TYNALLNGFCKLGRVDEAHVLLRSFENEGYLMDIKGYTCLIDGFVRTKRIDEAQSVFKNL 299
Query: 236 FDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG----TVCWGRL 99
F+ +VPD++LY+ MIRGLS + R+++A ++ RDM G+G T C+ L
Sbjct: 300 FEKNVVPDVVLYTTMIRGLSGAGRVKEALSLLRDMTGRGVQPDTQCYNTL 349
Score = 67.8 bits (164), Expect(2) = e-107
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNGL+ EA+ IFN+MEKLGC PS VTFN LIDGLCK G+LE
Sbjct: 390 RNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELE 430
Score = 107 bits (266), Expect(2) = 2e-24
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 13/267 (4%)
Frame = -1
Query: 881 VLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXX 702
+L +E + + LI G+ R ++ ++A F + + N P++
Sbjct: 260 LLRSFENEGYLMDIKGYTCLIDGFVRTKRIDEAQSVFKNLFEKNVVPDVVLYTTMIRGLS 319
Query: 701 XXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSI 522
+ M + ++ LI G C G+ A L E++E P +
Sbjct: 320 GAGRVKEALSLLRDMTGRGVQPDTQCYNTLIKGFCDMGVLDQARSLQLEISENDCFPDTY 379
Query: 521 TYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSF 342
TY++++ G+C+ +A +F+ M+ GC P T+N L+DG CK G+++EA ++F
Sbjct: 380 TYSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELEEAHLMFYKM 439
Query: 341 R-----------DDGFKVGIRGFSC--MIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILY 201
G + S MI+ L + +I +A KL ++ D G VP+++ Y
Sbjct: 440 EIGKNPSLFLRLSQGADRVLDSVSLQKMIEKLCETGKIHKAYKLLMQLADCGFVPNIVTY 499
Query: 200 SIMIRGLSESRRLEDATNMFRDMIGKG 120
+I+I GL +S + A +F+++ KG
Sbjct: 500 NILINGLCKSGLINGALKLFQELQVKG 526
Score = 33.9 bits (76), Expect(2) = 2e-24
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 126 KRNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKL 4
+R G + E+ ++F+ M K GC PSA + +L+ C+ G++
Sbjct: 542 QRVGRVDESFKLFDQMSKNGCMPSAEVYKSLMTWSCRRGQI 582
Score = 108 bits (270), Expect = 5e-21
Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 14/197 (7%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+S++I G+C++G+ ++A +F+EM + G PS +T+ ++ GLCKA +AH +F M
Sbjct: 380 TYSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELEEAHLMFYKM 439
Query: 446 KNSGCTP--------------DSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRG 309
+ G P DS + +++ C+ G+I +A+ L D GF I
Sbjct: 440 E-IGKNPSLFLRLSQGADRVLDSVSLQKMIEKLCETGKIHKAYKLLMQLADCGFVPNIVT 498
Query: 308 FSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMI 129
++ +I+GL +S I A KLFQ++ G PD I Y +I GL R++++ +F M
Sbjct: 499 YNILINGLCKSGLINGALKLFQELQVKGHFPDSITYGTLIDGLQRVGRVDESFKLFDQMS 558
Query: 128 GKGTVCWGRLNRFSMTW 78
G + + + MTW
Sbjct: 559 KNGCMPSAEVYKSLMTW 575
Score = 91.3 bits (225), Expect = 8e-16
Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 5/167 (2%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI+GLCKSG+ AL+LF E+ +G P SITY ++ GL + R ++ KLF M
Sbjct: 498 TYNILINGLCKSGLINGALKLFQELQVKGHFPDSITYGTLIDGLQRVGRVDESFKLFDQM 557
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFML-FKSFRDDGFKVGIRGFSCMIDGLIRSK- 273
+GC P + Y +L+ C+ GQI AF L F+ R+ F+ G + GLI
Sbjct: 558 SKNGCMPSAEVYKSLMTWSCRRGQISIAFSLWFQYLRNHAFRDG------EVIGLIEEHL 611
Query: 272 RIGEAEKLFQKVFDVGLVP---DLILYSIMIRGLSESRRLEDATNMF 141
G+ EK+ + + + L D Y+I + G+ + + +A +F
Sbjct: 612 EKGDLEKVVRGLLEFDLKRADFDSSPYNIWLIGMCQECKPHEALKIF 658
Score = 89.7 bits (221), Expect = 2e-15
Identities = 75/321 (23%), Positives = 132/321 (41%), Gaps = 36/321 (11%)
Frame = -1
Query: 947 YSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFG 768
+S+++D L SG + D ++ DE+ + V S + V++ G + ++ + A
Sbjct: 171 FSILIDGLC--KSGRTHDAL-ALFDEMTERGVLPSKITYTVILSGLCQAKRTDDAYRLLN 227
Query: 767 RMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSG 588
MK CKP+ T++ L++G CK G
Sbjct: 228 VMKTRGCKPDFV-----------------------------------TYNALLNGFCKLG 252
Query: 587 MTQDA---LR--------------------------------LFDEMTERGILPSSITYT 513
+A LR +F + E+ ++P + YT
Sbjct: 253 RVDEAHVLLRSFENEGYLMDIKGYTCLIDGFVRTKRIDEAQSVFKNLFEKNVVPDVVLYT 312
Query: 512 VILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDD 333
++ GL A R +A L M G PD+ YN L+ GFC G +D+A L ++
Sbjct: 313 TMIRGLSGAGRVKEALSLLRDMTGRGVQPDTQCYNTLIKGFCDMGVLDQARSLQLEISEN 372
Query: 332 GFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDA 153
+S +I G+ R+ + EA +F ++ +G P ++ ++ +I GL ++ LE+A
Sbjct: 373 DCFPDTYTYSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCKAGELEEA 432
Query: 152 TNMFRDM-IGKGTVCWGRLNR 93
MF M IGK + RL++
Sbjct: 433 HLMFYKMEIGKNPSLFLRLSQ 453
Score = 87.8 bits (216), Expect = 9e-15
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 14/269 (5%)
Frame = -1
Query: 953 VLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVET 774
VLY+ M+ L G S+L ++ V + LI G+ + ++A
Sbjct: 309 VLYTTMIRGLSGAGRVKEA---LSLLRDMTGRGVQPDTQCYNTLIKGFCDMGVLDQARSL 365
Query: 773 FGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCK 594
+ + +C P+ + ++N M K TF+ LIDGLCK
Sbjct: 366 QLEISENDCFPDTYTYSIVICGMCRNGLVEEARHIFNEMEKLGCFPSVVTFNTLIDGLCK 425
Query: 593 SGMTQDALRLFDEMTERGILPS--------------SITYTVILSGLCKAKRTHDAHKLF 456
+G ++A +F +M E G PS S++ ++ LC+ + H A+KL
Sbjct: 426 AGELEEAHLMFYKM-EIGKNPSLFLRLSQGADRVLDSVSLQKMIEKLCETGKIHKAYKLL 484
Query: 455 SLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRS 276
+ + G P+ TYN L++G CK G I+ A LF+ + G + +IDGL R
Sbjct: 485 MQLADCGFVPNIVTYNILINGLCKSGLINGALKLFQELQVKGHFPDSITYGTLIDGLQRV 544
Query: 275 KRIGEAEKLFQKVFDVGLVPDLILYSIMI 189
R+ E+ KLF ++ G +P +Y ++
Sbjct: 545 GRVDESFKLFDQMSKNGCMPSAEVYKSLM 573
>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
[Vitis vinifera]
Length = 798
Score = 318 bits (815), Expect(2) = 9e-99
Identities = 162/350 (46%), Positives = 228/350 (65%), Gaps = 4/350 (1%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EVL ++ +V+P+ +L KL PFL+ EI+ V++ Q + + + FRFFIW +R FRS
Sbjct: 40 EVLTVMETVNPMEDALEKLAPFLSSEIVNDVMREQRRPE----LGFRFFIWTTRRRSFRS 95
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
V ++L++DML D FD YW +L+EL++ + + F VLI Y + AEKAVE
Sbjct: 96 WVTHNLVIDMLAKDDG---FDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVE 152
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
+FG+MKD+ CKP++ N VYN MLK NY TF +L++GLC
Sbjct: 153 SFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLC 212
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
K+G T DAL++FDEMT++GI P+++ YT+ILSGLC+AKRT D H+L + MK SGC PDS
Sbjct: 213 KNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSI 272
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
T NALLDGFCK GQIDEAF L + F +G+ +GI+G+S +IDGL R+KR E ++ +K+
Sbjct: 273 TCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKM 332
Query: 236 FDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG----TVCWGRL 99
F G+ PD++LY+I+IRG E ++ A NM DM +G T C+ L
Sbjct: 333 FKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382
Score = 70.9 bits (172), Expect(2) = 9e-99
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNGLL EA+QIFN ME LGCSPS +TFNALIDGLCK G+LE
Sbjct: 423 RNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELE 463
Score = 99.0 bits (245), Expect = 4e-18
Identities = 74/321 (23%), Positives = 131/321 (40%), Gaps = 48/321 (14%)
Frame = -1
Query: 896 DLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXX 717
D +++L E + + LI G +R ++ ++ E +M +P++
Sbjct: 288 DEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTIL 347
Query: 716 XXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGI 537
+ N M + ++ LI G C G+ A L E+++
Sbjct: 348 IRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDC 407
Query: 536 LPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFM 357
P+S TYT+++ G+C+ +A ++F+ M+N GC+P T+NAL+DG CK G+++EA
Sbjct: 408 FPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARH 467
Query: 356 LF------------------------------------------KSFR------DDGFKV 321
LF K+++ D G
Sbjct: 468 LFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVP 527
Query: 320 GIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMF 141
I ++ +I+G ++K I A KLF+++ G PD + Y +I G R EDA +
Sbjct: 528 DIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVL 587
Query: 140 RDMIGKGTVCWGRLNRFSMTW 78
M+ G + + MTW
Sbjct: 588 DQMVKNGCTPSSAVYKCLMTW 608
Score = 89.4 bits (220), Expect(2) = 5e-17
Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 54/301 (17%)
Frame = -1
Query: 881 VLDELRDEKVSVSAN-------AFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACN 723
+LD+ R ++ +S N + +LI G R ++A + F +M++ C P++ N
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450
Query: 722 XXXXXXXXXXXXXXXXXVYNMM-----------LKSNYRVRCDTFSV--LIDGLCKSGMT 582
++ M L DT S+ +++ LC+SG+
Sbjct: 451 ALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLI 510
Query: 581 QDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNAL 402
A +L ++ + G++P +TY V+++G CKAK + A KLF ++ G +PDS TY L
Sbjct: 511 LKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTL 570
Query: 401 LDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIG-------------- 264
+DGF + + ++AF + +G + C++ R ++
Sbjct: 571 IDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLP 630
Query: 263 ----EAEKLFQKVFDVGLVP----------------DLILYSIMIRGLSESRRLEDATNM 144
E KL ++ F+ G + ++ Y+I + GL ++RR E+A +
Sbjct: 631 SQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKI 690
Query: 143 F 141
F
Sbjct: 691 F 691
Score = 26.6 bits (57), Expect(2) = 5e-17
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 105 EAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
EA +IF +++ + + LI+GLCKDG LE
Sbjct: 686 EALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLE 720
>emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 318 bits (815), Expect(2) = 9e-99
Identities = 162/350 (46%), Positives = 228/350 (65%), Gaps = 4/350 (1%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EVL ++ +V+P+ +L KL PFL+ EI+ V++ Q + + + FRFFIW +R FRS
Sbjct: 40 EVLTVMETVNPMEDALEKLAPFLSSEIVNDVMREQRRPE----LGFRFFIWTTRRRSFRS 95
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
V ++L++DML D FD YW +L+EL++ + + F VLI Y + AEKAVE
Sbjct: 96 WVTHNLVIDMLAKDDG---FDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVE 152
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
+FG+MKD+ CKP++ N VYN MLK NY TF +L++GLC
Sbjct: 153 SFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLC 212
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
K+G T DAL++FDEMT++GI P+++ YT+ILSGLC+AKRT D H+L + MK SGC PDS
Sbjct: 213 KNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSI 272
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
T NALLDGFCK GQIDEAF L + F +G+ +GI+G+S +IDGL R+KR E ++ +K+
Sbjct: 273 TCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKM 332
Query: 236 FDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG----TVCWGRL 99
F G+ PD++LY+I+IRG E ++ A NM DM +G T C+ L
Sbjct: 333 FKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382
Score = 70.9 bits (172), Expect(2) = 9e-99
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNGLL EA+QIFN ME LGCSPS +TFNALIDGLCK G+LE
Sbjct: 423 RNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELE 463
Score = 97.1 bits (240), Expect = 2e-17
Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Frame = -1
Query: 659 MLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKR 480
M K+ +++LI G C+ GM AL + ++MT+RG+ P + Y ++ G C
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGL 391
Query: 479 THDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSC 300
A L + + C P S TY L+ G C+ G +DEA +F + G I F+
Sbjct: 392 LDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNA 451
Query: 299 MIDGLIRSKRIGEAEKLFQKVFDVGLVPDLIL--------YSIMIRGLSESRRLEDATNM 144
+IDGL ++ + EA LF K+ ++G P L L G R EDA +
Sbjct: 452 LIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRV 510
Query: 143 FRDMIGKGTVCWGRLNRFSMTW 78
M+ G + + MTW
Sbjct: 511 LDQMVKNGCTPSSAVYKCLMTW 532
>ref|XP_002308024.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550335473|gb|EEE91547.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 838
Score = 276 bits (706), Expect(2) = 5e-86
Identities = 142/350 (40%), Positives = 221/350 (63%), Gaps = 4/350 (1%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EV +I +++P+ P+L + PFL+ +I+ S++++ + ++ FRFFIWA+ +RFR+
Sbjct: 35 EVFTVIKTMNPMEPALEPMVPFLSPKIVTSIIQNPP----NPQLGFRFFIWASNFKRFRA 90
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
L+ D+L+ + N +LY L+ L++ + V +AF VLI Y ++ +KA+E
Sbjct: 91 WESCDLITDLLI---NQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAME 147
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
TFG M+D++C P++ N VY M+K N TFS+LIDGLC
Sbjct: 148 TFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLC 207
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
KSG +DAL LFDEMT+RGILP + TY V++SGLC++KR DA++LF MK+SG PD
Sbjct: 208 KSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFV 267
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
T NALL+GFC ++DEAF L + F DG+ + +RG+SC+I GL R+KR + + L++K+
Sbjct: 268 TCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKM 327
Query: 236 FDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG----TVCWGRL 99
+ + PD+ LY+IM++GL+E+ ++ DA + +M G TVC+ L
Sbjct: 328 IEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVL 377
Score = 70.5 bits (171), Expect(2) = 5e-86
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNGL +AQ+IFN+MEKLGC PSAVTFN+LIDGLCK G+LE
Sbjct: 418 RNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLE 458
Score = 112 bits (280), Expect = 4e-22
Identities = 80/321 (24%), Positives = 136/321 (42%), Gaps = 48/321 (14%)
Frame = -1
Query: 896 DLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXX 717
D +S+L + + + LI G +R ++ E + +M + N KP++
Sbjct: 283 DEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIM 342
Query: 716 XXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGI 537
+ N M +S ++VLI G C G+ +A L E++
Sbjct: 343 MKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDC 402
Query: 536 LPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFM 357
P+ TY++++SG+C+ T DA ++F+ M+ GC P + T+N+L+DG CK GQ+++A +
Sbjct: 403 FPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHL 462
Query: 356 LF------------------------------------------KSFR------DDGFKV 321
LF K++R D G
Sbjct: 463 LFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAP 522
Query: 320 GIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMF 141
GI ++ +++G + A KLF+++ GL PD + Y +I GL +R EDA +F
Sbjct: 523 GIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVF 582
Query: 140 RDMIGKGTVCWGRLNRFSMTW 78
M G + R MTW
Sbjct: 583 DQMEKNGCTPDAAVYRTMMTW 603
Score = 96.7 bits (239), Expect = 2e-17
Identities = 65/289 (22%), Positives = 117/289 (40%), Gaps = 48/289 (16%)
Frame = -1
Query: 863 DEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXXXXXXXX 684
++ V + +++ G K A+E M + P+ N
Sbjct: 329 EDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLS 388
Query: 683 XXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVIL 504
+ + + + T+S+LI G+C++G+T+DA +F+EM + G PS++T+ ++
Sbjct: 389 EARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLI 448
Query: 503 SGLCKAKRTHDAHKLFSLMK---------------------------------------- 444
GLCK + AH LF M+
Sbjct: 449 DGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKA 508
Query: 443 --------NSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDG 288
+SG P TYN L++GFCK G + A+ LF+ + G + +I+G
Sbjct: 509 YRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLING 568
Query: 287 LIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMF 141
L+R +R +A K+F ++ G PD +Y M+ + L A +++
Sbjct: 569 LLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLW 617
Score = 91.3 bits (225), Expect = 8e-16
Identities = 52/170 (30%), Positives = 94/170 (55%), Gaps = 8/170 (4%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++L++G CK G A +LF EM +G+ P ++TY +++GL + +R DA+K+F M
Sbjct: 526 TYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQM 585
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLF-------KSFRDDGFKVGIRGFSCMIDG 288
+ +GCTPD+A Y ++ C+ ++ AF L+ +S D+ K I+G
Sbjct: 586 EKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIKA--------IEG 637
Query: 287 LIRSKRIGEAEK-LFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMF 141
+ + +A + L + F + DL Y+I + GL ++RR+ +A +F
Sbjct: 638 YFEKQEVEKAVRGLLEMDFKLNDF-DLGPYAIWLIGLCQTRRVGEALKIF 686
Score = 69.7 bits (169), Expect = 3e-09
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 20/234 (8%)
Frame = -1
Query: 881 VLDELRDEKVSVSAN-------AFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACN 723
+L E R ++ +S + + +LI G R A E F M+ C P+ N
Sbjct: 386 LLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFN 445
Query: 722 XXXXXXXXXXXXXXXXXV-YNMMLKSN------------YRVRCDTFSVLIDGLCKSGMT 582
+ Y M + N + + + +++ LC SG+
Sbjct: 446 SLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLI 505
Query: 581 QDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNAL 402
A R+ ++ + G P TY ++++G CK + A+KLF M+ G +PD+ TY L
Sbjct: 506 HKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTL 565
Query: 401 LDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQK 240
++G + + ++A+ +F +G + M+ + R + A L+ K
Sbjct: 566 INGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLK 619
>gb|EOY31969.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 800
Score = 312 bits (800), Expect(2) = 8e-86
Identities = 157/341 (46%), Positives = 231/341 (67%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
E+ +++ V+P+ P+L L PFL+ +I+ S+++ Q + ++ FRFFIWA ++R RS
Sbjct: 40 EIHSILDIVNPMEPALEPLLPFLSPDIVTSIIQDQP----NPQLGFRFFIWAMQRKRLRS 95
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
L+VDMLL D+G FD+YW L+E++ + ++AF VLI GY +L EKAVE
Sbjct: 96 SASDKLVVDMLLRKDNG--FDMYWQTLEEIKKCGALIVSDAFKVLISGYSKLGLDEKAVE 153
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
FG+MKD++CKP++ N VYN MLK+NY+ TFS+LIDGLC
Sbjct: 154 CFGKMKDFDCKPDVFTYNTILYVMVRRKVLLLALAVYNQMLKNNYKPNRATFSILIDGLC 213
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
K+G T+DAL +FDEMT+RGI P+ +YT+I+SGLC+A R DA +L + MK SGC+PD
Sbjct: 214 KNGKTEDALNMFDEMTQRGIEPNRCSYTIIVSGLCQADRADDACRLLNKMKESGCSPDFV 273
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
YNALL+GFC+ G++DEAF L +SF+ DGF +G+RG+S I+GL R++R EA + K+
Sbjct: 274 AYNALLNGFCQLGRVDEAFALLQSFQKDGFVLGLRGYSSFINGLFRARRFEEAYAWYTKM 333
Query: 236 FDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTV 114
F+ + PD++LY+IM+RGLS + ++EDA + +M +G V
Sbjct: 334 FEENVKPDVVLYAIMLRGLSVAGKVEDAMKLLSEMTERGLV 374
Score = 33.5 bits (75), Expect(2) = 8e-86
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDG 10
GLL +A+ + ++ C P+A T+ LI G+C++G
Sbjct: 391 GLLDQARSLQLEISSYDCFPNACTYTILISGMCQNG 426
Score = 103 bits (257), Expect = 2e-19
Identities = 81/376 (21%), Positives = 155/376 (41%), Gaps = 88/376 (23%)
Frame = -1
Query: 947 YSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFG 768
+S+++D L +G + D ++ DE+ + + ++ +++ G + +A+ A
Sbjct: 205 FSILIDGLC--KNGKTEDAL-NMFDEMTQRGIEPNRCSYTIIVSGLCQADRADDACRLLN 261
Query: 767 RMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXV--------------------------- 669
+MK+ C P+ A N +
Sbjct: 262 KMKESGCSPDFVAYNALLNGFCQLGRVDEAFALLQSFQKDGFVLGLRGYSSFINGLFRAR 321
Query: 668 --------YNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGIL------- 534
Y M + N + +++++ GL +G +DA++L EMTERG++
Sbjct: 322 RFEEAYAWYTKMFEENVKPDVVLYAIMLRGLSVAGKVEDAMKLLSEMTERGLVPDTYCYN 381
Query: 533 ----------------------------PSSITYTVILSGLCKAKRTHDAHKLFSLMKNS 438
P++ TYT+++SG+C+ +A ++F M+
Sbjct: 382 AVIKGFCDTGLLDQARSLQLEISSYDCFPNACTYTILISGMCQNGLVGEAQQIFDEMEKL 441
Query: 437 GCTPDSATYNALLDGFCKCGQIDEAFMLF-------------KSFRDDGFKVGIRGFSCM 297
GC P T+NAL+DG K GQ+++A +LF + + M
Sbjct: 442 GCFPSVVTFNALIDGLSKAGQLEKAHLLFYKMEIGRNPSLFLRLSHGSSGVLDSSSLQTM 501
Query: 296 IDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG- 120
++ L S RI +A ++ ++ D G VPD+ Y+I+I G ++ + A +F+++ KG
Sbjct: 502 VEQLYESGRILKAYRILMQLADGGNVPDIFTYNILIHGFCKAGNINGAFKLFKELQLKGI 561
Query: 119 ---TVCWGRL-NRFSM 84
+V +G L N F M
Sbjct: 562 SPDSVTYGTLINGFQM 577
Score = 98.6 bits (244), Expect = 5e-18
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 48/321 (14%)
Frame = -1
Query: 896 DLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXX 717
D +++L + + + + I G +R R+ E+A + +M + N KP++
Sbjct: 289 DEAFALLQSFQKDGFVLGLRGYSSFINGLFRARRFEEAYAWYTKMFEENVKPDVVLYAIM 348
Query: 716 XXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGI 537
+ + M + ++ +I G C +G+ A L E++
Sbjct: 349 LRGLSVAGKVEDAMKLLSEMTERGLVPDTYCYNAVIKGFCDTGLLDQARSLQLEISSYDC 408
Query: 536 LPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFM 357
P++ TYT+++SG+C+ +A ++F M+ GC P T+NAL+DG K GQ+++A +
Sbjct: 409 FPNACTYTILISGMCQNGLVGEAQQIFDEMEKLGCFPSVVTFNALIDGLSKAGQLEKAHL 468
Query: 356 LF------------------------------------------KSFR------DDGFKV 321
LF K++R D G
Sbjct: 469 LFYKMEIGRNPSLFLRLSHGSSGVLDSSSLQTMVEQLYESGRILKAYRILMQLADGGNVP 528
Query: 320 GIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMF 141
I ++ +I G ++ I A KLF+++ G+ PD + Y +I G + R EDA +F
Sbjct: 529 DIFTYNILIHGFCKAGNINGAFKLFKELQLKGISPDSVTYGTLINGFQMAGREEDAFRIF 588
Query: 140 RDMIGKGTVCWGRLNRFSMTW 78
M+ G + R MTW
Sbjct: 589 DQMVKNGCKPSVAVYRSLMTW 609
Score = 85.9 bits (211), Expect = 4e-14
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 48/210 (22%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI G+C++G+ +A ++FDEM + G PS +T+ ++ GL KA + AH LF M
Sbjct: 414 TYTILISGMCQNGLVGEAQQIFDEMEKLGCFPSVVTFNALIDGLSKAGQLEKAHLLFYKM 473
Query: 446 K------------------------------------------------NSGCTPDSATY 411
+ + G PD TY
Sbjct: 474 EIGRNPSLFLRLSHGSSGVLDSSSLQTMVEQLYESGRILKAYRILMQLADGGNVPDIFTY 533
Query: 410 NALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFD 231
N L+ GFCK G I+ AF LFK + G + +I+G + R +A ++F ++
Sbjct: 534 NILIHGFCKAGNINGAFKLFKELQLKGISPDSVTYGTLINGFQMAGREEDAFRIFDQMVK 593
Query: 230 VGLVPDLILYSIMIRGLSESRRLEDATNMF 141
G P + +Y ++ R++ A N++
Sbjct: 594 NGCKPSVAVYRSLMTWSCRRRKVSLAFNLW 623
Score = 77.0 bits (188), Expect = 2e-11
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI G CK+G A +LF E+ +GI P S+TY +++G A R DA ++F M
Sbjct: 532 TYNILIHGFCKAGNINGAFKLFKELQLKGISPDSVTYGTLINGFQMAGREEDAFRIFDQM 591
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKR- 270
+GC P A Y +L+ C+ ++ AF L+ + +R D +I+
Sbjct: 592 VKNGCKPSVAVYRSLMTWSCRRRKVSLAFNLWLMY--------LRSLPGRQDTVIKEVEK 643
Query: 269 ---IGEAEKLFQ-------KVFDVGLVPDLILYSIMIRGLSESRRLEDATNMF 141
G+ EK + K+ + P Y+I + GL ++ R+E+A +F
Sbjct: 644 YFDEGQVEKAVRGLLRMDFKLNSFSVAP----YTIWLIGLCQAGRVEEALKIF 692
Score = 68.6 bits (166), Expect = 6e-09
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
+NGL+GEAQQIF++MEKLGC PS VTFNALIDGL K G+LE
Sbjct: 424 QNGLVGEAQQIFDEMEKLGCFPSVVTFNALIDGLSKAGQLE 464
Score = 60.8 bits (146), Expect = 1e-06
Identities = 55/215 (25%), Positives = 93/215 (43%)
Frame = -1
Query: 917 GDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPN 738
G+ +F L+ EL+ + +S + + LI G+ + E A F +M CKP+
Sbjct: 544 GNINGAFKLF----KELQLKGISPDSVTYGTLINGFQMAGREEDAFRIFDQMVKNGCKPS 599
Query: 737 LAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFD 558
+A ++ M L+S R DT ++ G + A+R
Sbjct: 600 VAVYRSLMTWSCRRRKVSLAFNLWLMYLRS-LPGRQDTVIKEVEKYFDEGQVEKAVRGLL 658
Query: 557 EMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCG 378
M + S YT+ L GLC+A R +A K+F +++ + L+ G CK G
Sbjct: 659 RMDFKLNSFSVAPYTIWLIGLCQAGRVEEALKIFYILEECKVVVTPPSCVRLIVGLCKEG 718
Query: 377 QIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSK 273
+D A +F + GFK+ R + ++ L+RSK
Sbjct: 719 NLDLAVDVFLYTLEQGFKLMPRICNYLLKSLLRSK 753
>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 804
Score = 302 bits (773), Expect(2) = 1e-82
Identities = 154/341 (45%), Positives = 227/341 (66%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EVL +I+SV+PI P+L PFL+ I+ ++K+ + + FRFFIWA+ RR RS
Sbjct: 35 EVLTIIDSVNPIEPALESKVPFLSPSIVTYIIKNPP----NSLLGFRFFIWASKFRRLRS 90
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
V +++++DML+ N F+LYW VL E++ S+SA+AF VLI Y ++ EKAVE
Sbjct: 91 WVSHNMIIDMLI---KDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVE 147
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
+F MKD++CKP++ N +YN MLK N TFS+LIDG+C
Sbjct: 148 SFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMC 207
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
KSG TQ+AL++FDEMT+R ILP+ ITYT+I+SGLC+A++ A++LF MK+ GC PDS
Sbjct: 208 KSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSV 267
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
TYNALL GFCK G++DEA L K F D + + +G+SC+IDGL R++R +A+ ++K+
Sbjct: 268 TYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKM 327
Query: 236 FDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTV 114
+ + PD+ILY+IM++GLS++ + +DA + +M +G V
Sbjct: 328 TEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLV 368
Score = 33.5 bits (75), Expect(2) = 1e-82
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDG 10
GLL EA+ + ++ K C SA T+ LI G+C+ G
Sbjct: 385 GLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSG 420
Score = 115 bits (287), Expect = 5e-23
Identities = 95/409 (23%), Positives = 155/409 (37%), Gaps = 119/409 (29%)
Frame = -1
Query: 947 YSLMVD-MLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETF 771
+S+++D M G + N+ ++ DE+ ++ + + ++I G + +KA+ A F
Sbjct: 199 FSILIDGMCKSGKTQNALQMF----DEMTQRRILPNKITYTIIISGLCQAQKADVAYRLF 254
Query: 770 GRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGL--- 600
MKD+ C P+ N + K Y + +S LIDGL
Sbjct: 255 IAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRA 314
Query: 599 --------------------------------CKSGMTQDALRLFDEMTERGILP----- 531
K+G +DALRL +EMTERG++P
Sbjct: 315 RRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCY 374
Query: 530 ------------------------------SSITYTVILSGLCKAKRTHDAHKLFSLMKN 441
S+ TYT+++ G+C++ DA ++F+ M+
Sbjct: 375 NALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEK 434
Query: 440 SGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFR-------------------------- 339
GC P T+NAL+DGFCK G I++A +LF
Sbjct: 435 HGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQT 494
Query: 338 ----------------------DDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVG 225
D GF I ++ +I G ++ I A KLF+++ G
Sbjct: 495 MVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKG 554
Query: 224 LVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTVCWGRLNRFSMTW 78
L PD + Y +I GL + R EDA + ++ G + + MTW
Sbjct: 555 LSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTW 603
Score = 79.0 bits (193), Expect = 4e-12
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 11/187 (5%)
Frame = -1
Query: 668 YNMMLK---SNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSG 498
YN++++ S + T+++LI G CK+G A +LF E+ +G+ P S+TY +++G
Sbjct: 509 YNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLING 568
Query: 497 LCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVG 318
L A R DA + + +GCTP + Y + + C+ +I AF L+ +
Sbjct: 569 LLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLR-----S 623
Query: 317 IRG-FSCMIDGLIRSKRIGEAEKLFQ-------KVFDVGLVPDLILYSIMIRGLSESRRL 162
I G S ++ + + GE E+ + K+ D L P Y+I + GL ++ RL
Sbjct: 624 IPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAP----YTIWLIGLCQAGRL 679
Query: 161 EDATNMF 141
E+A +F
Sbjct: 680 EEALKIF 686
Score = 67.4 bits (163), Expect = 1e-08
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
R+GL+G+AQQIFN+MEK GC PS VTFNALIDG CK G +E
Sbjct: 418 RSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIE 458
>ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
[Cucumis sativus]
Length = 783
Score = 272 bits (696), Expect(2) = 2e-82
Identities = 146/350 (41%), Positives = 209/350 (59%), Gaps = 4/350 (1%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EV +I ++ P+ L+ + + I SVL+ Q D R+ FR FIW+ R
Sbjct: 37 EVSTIIETLDPMEDGLKVISSRIRSYTITSVLQEQP----DTRLGFRLFIWSLKSWHLRC 92
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
+ L++ L+ N+F+LYW VL EL++ + +S+ AF VLI Y EKAVE
Sbjct: 93 RTVQDLIIGKLI---KENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVE 149
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
+FG M+D++CKP+L A N VYN MLK N T+ +LI GLC
Sbjct: 150 SFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLC 209
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
K+ TQDAL LFDEMT+RGILP+ I Y+++LSGLC+AK+ DA +LFS M+ SGC D
Sbjct: 210 KTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLI 269
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
TYN LL+GFCK G +D+AF L + DG +G+ G+ C+I+GL R++R EA +QK+
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329
Query: 236 FDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG----TVCWGRL 99
+ PD++LY+IMIRGLS+ R+ +A + +M +G T+C+ L
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNAL 379
Score = 62.0 bits (149), Expect(2) = 2e-82
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
+NGL+ +AQ IF +MEKLGC PS VTFN+LI+GLCK +LE
Sbjct: 420 KNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLE 460
Score = 112 bits (279), Expect = 5e-22
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 13/274 (4%)
Frame = -1
Query: 860 EKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXXXXXXXXX 681
E + + ++I G + + +A+ G M + +P+ N
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391
Query: 680 XXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILS 501
+ + K + T+S+LI G+CK+G+ A +F EM + G LPS +T+ +++
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLIN 451
Query: 500 GLCKAKRTHDAHKLF-------------SLMKNSGCTPDSATYNALLDGFCKCGQIDEAF 360
GLCKA R +A LF L + + D A+ +++ C+ G I +A+
Sbjct: 452 GLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAY 511
Query: 359 MLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGL 180
L D G IR ++ +I+G + I A KLF+++ G +PD + Y +I GL
Sbjct: 512 KLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGL 571
Query: 179 SESRRLEDATNMFRDMIGKGTVCWGRLNRFSMTW 78
+ R EDA +F M+ KG V + MTW
Sbjct: 572 YRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTW 605
Score = 95.1 bits (235), Expect = 6e-17
Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 35/292 (11%)
Frame = -1
Query: 902 SFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACN 723
+F L +V +++ ++ + +LI G + K + A+ F M D PN +
Sbjct: 178 AFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYS 237
Query: 722 XXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTER 543
+++ M S T++VL++G CKSG DA L +T+
Sbjct: 238 IVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKD 297
Query: 542 GILPSSITYTVILSGLCKAKRTHDAH---------------------------------- 465
G + I Y +++GL +A+R +AH
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357
Query: 464 -KLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDG 288
L M G PD+ YNAL+ GFC G +DEA L +S +I G
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 287 LIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDM 132
+ ++ I +A+ +F+++ +G +P ++ ++ +I GL ++ RLE+A +F M
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469
Score = 78.2 bits (191), Expect = 7e-12
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI+G CK G A +LF EM +G +P S+TY ++ GL +A R DA ++F M
Sbjct: 528 TYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSC-MIDGLIRSKR 270
GC P+S+TY ++ C+ I A ++ + D RG+ + + S
Sbjct: 588 VKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRD-----FRGWEDEKVRVVAESFD 642
Query: 269 IGEAEKLFQKVFDVGLVP---DLILYSIMIRGLSESRRLEDATNMF 141
E + +++ ++ + DL Y+I + GL +++R +A +F
Sbjct: 643 NEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIF 688
>ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
[Cucumis sativus]
Length = 950
Score = 270 bits (690), Expect(2) = 1e-81
Identities = 145/350 (41%), Positives = 208/350 (59%), Gaps = 4/350 (1%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EV +I ++ P+ L+ + + I SVL+ Q D R+ FR FIW+ R
Sbjct: 37 EVSTIIETLDPMEDGLKVISSRIRSYTITSVLQEQP----DTRLGFRLFIWSLKSWHLRC 92
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
+ L++ L+ N+F+LYW VL EL++ + +S+ AF VLI Y EKAVE
Sbjct: 93 RTVQDLIIGKLI---KENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVE 149
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
+F M+D++CKP+L A N VYN MLK N T+ +LI GLC
Sbjct: 150 SFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLC 209
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
K+ TQDAL LFDEMT+RGILP+ I Y+++LSGLC+AK+ DA +LFS M+ SGC D
Sbjct: 210 KTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLI 269
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
TYN LL+GFCK G +D+AF L + DG +G+ G+ C+I+GL R++R EA +QK+
Sbjct: 270 TYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329
Query: 236 FDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG----TVCWGRL 99
+ PD++LY+IMIRGLS+ R+ +A + +M +G T+C+ L
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNAL 379
Score = 62.0 bits (149), Expect(2) = 1e-81
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
+NGL+ +AQ IF +MEKLGC PS VTFN+LI+GLCK +LE
Sbjct: 420 KNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLE 460
Score = 112 bits (279), Expect = 5e-22
Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 13/274 (4%)
Frame = -1
Query: 860 EKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXXXXXXXXX 681
E + + ++I G + + +A+ G M + +P+ N
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391
Query: 680 XXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILS 501
+ + K + T+S+LI G+CK+G+ A +F EM + G LPS +T+ +++
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLIN 451
Query: 500 GLCKAKRTHDAHKLF-------------SLMKNSGCTPDSATYNALLDGFCKCGQIDEAF 360
GLCKA R +A LF L + + D A+ +++ C+ G I +A+
Sbjct: 452 GLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAY 511
Query: 359 MLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGL 180
L D G IR ++ +I+G + I A KLF+++ G +PD + Y +I GL
Sbjct: 512 KLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGL 571
Query: 179 SESRRLEDATNMFRDMIGKGTVCWGRLNRFSMTW 78
+ R EDA +F M+ KG V + MTW
Sbjct: 572 YRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTW 605
Score = 95.1 bits (235), Expect = 6e-17
Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 35/292 (11%)
Frame = -1
Query: 902 SFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACN 723
+F L +V +++ ++ + +LI G + K + A+ F M D PN +
Sbjct: 178 AFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYS 237
Query: 722 XXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTER 543
+++ M S T++VL++G CKSG DA L +T+
Sbjct: 238 IVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKD 297
Query: 542 GILPSSITYTVILSGLCKAKRTHDAH---------------------------------- 465
G + I Y +++GL +A+R +AH
Sbjct: 298 GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEA 357
Query: 464 -KLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDG 288
L M G PD+ YNAL+ GFC G +DEA L +S +I G
Sbjct: 358 LTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICG 417
Query: 287 LIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDM 132
+ ++ I +A+ +F+++ +G +P ++ ++ +I GL ++ RLE+A +F M
Sbjct: 418 MCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469
Score = 78.2 bits (191), Expect = 7e-12
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI+G CK G A +LF EM +G +P S+TY ++ GL +A R DA ++F M
Sbjct: 528 TYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQM 587
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSC-MIDGLIRSKR 270
GC P+S+TY ++ C+ I A ++ + D RG+ + + S
Sbjct: 588 VKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRD-----FRGWEDEKVRVVAESFD 642
Query: 269 IGEAEKLFQKVFDVGLVP---DLILYSIMIRGLSESRRLEDATNMF 141
E + +++ ++ + DL Y+I + GL +++R +A +F
Sbjct: 643 NEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIF 688
>ref|XP_006492928.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like
[Citrus sinensis]
Length = 869
Score = 303 bits (775), Expect(2) = 1e-81
Identities = 154/341 (45%), Positives = 224/341 (65%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EVL ++++V PI P+L L PFL++ + SV+ K+ ++ FRFFIWAA ++R RS
Sbjct: 109 EVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKT----KNPQVGFRFFIWAAKRKRLRS 164
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
S ++ MLL N FDLYW LDEL+ VSV ++ F VLI GY+++ EKA+E
Sbjct: 165 FASNSAVIRMLL---KPNGFDLYWQTLDELKSGNVSVVSDVFFVLISGYYKVGDCEKALE 221
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
+FG+MK+++C+P++ N VY M+K N TFS+LIDGL
Sbjct: 222 SFGKMKEFDCQPDVYMYNAVLNIVFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIDGLS 281
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
KSG T+ A+++FDEMT+RGILP+ TYT+++SGLC+ R +A++LF MK+SGC+PD
Sbjct: 282 KSGKTEVAIKMFDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 341
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
YNALL+GFCK +DEA L +SF DGF G+ +SC+IDGL R+KR EA ++K+
Sbjct: 342 AYNALLNGFCKLRGVDEALALLRSFEKDGFVPGLGSYSCLIDGLFRAKRYDEAYAWYRKM 401
Query: 236 FDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTV 114
F+ + PD++LY ++IRGLSE+ +++DA + DM +G V
Sbjct: 402 FEEKIEPDVVLYGVIIRGLSEAGKVKDAMKLLSDMSDRGIV 442
Score = 28.9 bits (63), Expect(2) = 1e-81
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
GLL +A+ + ++ K P+ TF LI G+C++G ++
Sbjct: 459 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 497
Score = 107 bits (267), Expect = 1e-20
Identities = 76/303 (25%), Positives = 131/303 (43%), Gaps = 13/303 (4%)
Frame = -1
Query: 947 YSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFG 768
YS ++D L +D ++ ++ +EK+ + V+I G K + A++
Sbjct: 378 YSCLIDGLF---RAKRYDEAYAWYRKMFEEKIEPDVVLYGVIIRGLSEAGKVKDAMKLLS 434
Query: 767 RMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSG 588
M D P++ N + + K + TF++LI G+C++G
Sbjct: 435 DMSDRGIVPDIYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 494
Query: 587 MTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLF-------------SLM 447
M DA +LF++M + G PS T+ ++ GLCKA A+ LF L
Sbjct: 495 MVDDAQKLFNKMEKAGCFPSVGTFNALIDGLCKAGELEKANLLFYKMEIGKNPMLFLRLS 554
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRI 267
+ D A+ +++ +C G I +A+ + + G I ++ +I+G + I
Sbjct: 555 QGGNRVHDKASLQTMVEQYCTSGLIHKAYKILMQLAESGNLPDIITYNILINGFCKVGNI 614
Query: 266 GEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTVCWGRLNRFS 87
A KLF+++ GL PD + Y +I GL R EDA +F M G + +
Sbjct: 615 NGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQMPQNGCTPSPAVYKSL 674
Query: 86 MTW 78
MTW
Sbjct: 675 MTW 677
Score = 97.4 bits (241), Expect = 1e-17
Identities = 84/323 (26%), Positives = 135/323 (41%), Gaps = 36/323 (11%)
Frame = -1
Query: 953 VLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVET 774
V +SL++D L SG + ++ + DE+ + + + ++I G ++ +A++A
Sbjct: 271 VTFSLLIDGL--SKSGKT-EVAIKMFDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 327
Query: 773 FGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCK 594
F +MKD C P+ A N L++G CK
Sbjct: 328 FLKMKDSGCSPDFVAYN-----------------------------------ALLNGFCK 352
Query: 593 SGMTQDALRL----------------------------FDE-------MTERGILPSSIT 519
+AL L +DE M E I P +
Sbjct: 353 LRGVDEALALLRSFEKDGFVPGLGSYSCLIDGLFRAKRYDEAYAWYRKMFEEKIEPDVVL 412
Query: 518 YTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFR 339
Y VI+ GL +A + DA KL S M + G PD YNAL+ GFC G +D+A L
Sbjct: 413 YGVIIRGLSEAGKVKDAMKLLSDMSDRGIVPDIYCYNALIKGFCDLGLLDQARSLQVEIW 472
Query: 338 DDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLE 159
F+ +I G+ R+ + +A+KLF K+ G P + ++ +I GL ++ LE
Sbjct: 473 KRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGTFNALIDGLCKAGELE 532
Query: 158 DATNMFRDM-IGKGTVCWGRLNR 93
A +F M IGK + + RL++
Sbjct: 533 KANLLFYKMEIGKNPMLFLRLSQ 555
Score = 89.7 bits (221), Expect = 2e-15
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI+G CK G AL+LF E+ +G+ P S+TY +++GL + R DA ++F M
Sbjct: 600 TYNILINGFCKVGNINGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQM 659
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSF------RDDGFKVGIRGFSCMIDGL 285
+GCTP A Y +L+ C+ +I AF L+ + RDD I F + G
Sbjct: 660 PQNGCTPSPAVYKSLMTWSCRRRKISLAFSLWLQYLRDISGRDDESMKSIEEF--LQKGK 717
Query: 284 IRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMI 129
+ + G E F K+ D L P Y+I + GL + ++++A N+F ++
Sbjct: 718 VENAIQGLLEMDF-KLNDFQLAP----YTIWLIGLCQDGQVKEAFNIFSILV 764
Score = 76.3 bits (186), Expect = 3e-11
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 20/232 (8%)
Frame = -1
Query: 881 VLDELRDEKVSV-------SANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACN 723
+LD+ R +V + + + F +LI G R + A + F +M+ C P++ N
Sbjct: 460 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGTFN 519
Query: 722 XXXXXXXXXXXXXXXXXVY-------NMML-----KSNYRVRCD-TFSVLIDGLCKSGMT 582
++ N ML + RV + +++ C SG+
Sbjct: 520 ALIDGLCKAGELEKANLLFYKMEIGKNPMLFLRLSQGGNRVHDKASLQTMVEQYCTSGLI 579
Query: 581 QDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNAL 402
A ++ ++ E G LP ITY ++++G CK + A KLF ++ G +PDS TY L
Sbjct: 580 HKAYKILMQLAESGNLPDIITYNILINGFCKVGNINGALKLFKELQLKGLSPDSVTYGTL 639
Query: 401 LDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLF 246
++G + + ++AF +F+ +G + ++ R ++I A L+
Sbjct: 640 INGLQRVDREEDAFRIFEQMPQNGCTPSPAVYKSLMTWSCRRRKISLAFSLW 691
Score = 63.2 bits (152), Expect = 2e-07
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNG++ +AQ++FN MEK GC PS TFNALIDGLCK G+LE
Sbjct: 492 RNGMVDDAQKLFNKMEKAGCFPSVGTFNALIDGLCKAGELE 532
>ref|XP_006421323.1| hypothetical protein CICLE_v10004347mg [Citrus clementina]
gi|557523196|gb|ESR34563.1| hypothetical protein
CICLE_v10004347mg [Citrus clementina]
Length = 801
Score = 303 bits (775), Expect(2) = 1e-81
Identities = 154/341 (45%), Positives = 224/341 (65%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EVL ++++V PI P+L L PFL++ + SV+ K+ ++ FRFFIWAA ++R RS
Sbjct: 41 EVLTILDTVTPIEPALEPLLPFLSKTTVTSVIMKT----KNPQVGFRFFIWAAKRKRLRS 96
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
S ++ MLL N FDLYW LDEL+ VSV ++ F VLI GY+++ EKA+E
Sbjct: 97 FASNSAVIRMLL---KPNGFDLYWQTLDELKSGNVSVVSDVFFVLISGYYKVGDCEKALE 153
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
+FG+MK+++C+P++ N VY M+K N TFS+LIDGL
Sbjct: 154 SFGKMKEFDCQPDVYMYNAVLNIVFRKQLFLLALAVYYEMVKLNCLPNIVTFSLLIDGLS 213
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
KSG T+ A+++FDEMT+RGILP+ TYT+++SGLC+ R +A++LF MK+SGC+PD
Sbjct: 214 KSGKTEVAIKMFDEMTQRGILPNKFTYTIVISGLCQINRADEAYRLFLKMKDSGCSPDFV 273
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
YNALL+GFCK +DEA L +SF DGF G+ +SC+IDGL R+KR EA ++K+
Sbjct: 274 AYNALLNGFCKLRGVDEALALLRSFEKDGFVPGLGSYSCLIDGLFRAKRYDEAYAWYRKM 333
Query: 236 FDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTV 114
F+ + PD++LY ++IRGLSE+ +++DA + DM +G V
Sbjct: 334 FEEKIEPDVVLYGVIIRGLSEAGKVKDAMKLLSDMSDRGIV 374
Score = 28.9 bits (63), Expect(2) = 1e-81
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
GLL +A+ + ++ K P+ TF LI G+C++G ++
Sbjct: 391 GLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVD 429
Score = 97.4 bits (241), Expect(2) = 2e-21
Identities = 74/285 (25%), Positives = 122/285 (42%), Gaps = 35/285 (12%)
Frame = -1
Query: 953 VLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVET 774
V +SL++D L SG + ++ + DE+ + + + ++I G ++ +A++A
Sbjct: 203 VTFSLLIDGL--SKSGKT-EVAIKMFDEMTQRGILPNKFTYTIVISGLCQINRADEAYRL 259
Query: 773 FGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCK 594
F +MKD C P+ A N + K + ++S LIDGL +
Sbjct: 260 FLKMKDSGCSPDFVAYNALLNGFCKLRGVDEALALLRSFEKDGFVPGLGSYSCLIDGLFR 319
Query: 593 SGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSAT 414
+ +A + +M E I P + Y VI+ GL +A + DA KL S M + G PD
Sbjct: 320 AKRYDEAYAWYRKMFEEKIEPDVVLYGVIIRGLSEAGKVKDAMKLLSDMSDRGIVPDIYC 379
Query: 413 YNALLDGFC-----------------------------------KCGQIDEAFMLFKSFR 339
YNAL+ GFC + G +D+A LF
Sbjct: 380 YNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKME 439
Query: 338 DDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLIL 204
G + F+ +IDGL ++ + +A LF K+ ++G P L L
Sbjct: 440 KAGCFPSVGTFNALIDGLCKAGELEKANLLFYKM-EIGKNPTLFL 483
Score = 33.5 bits (75), Expect(2) = 2e-21
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3
Query: 120 NGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKL 4
+GL+ +A +I + + G P +T+N LI+G CK G +
Sbjct: 508 SGLIHKAYKILMQLAESGNLPDIITYNILINGFCKVGNI 546
Score = 107 bits (267), Expect = 1e-20
Identities = 76/303 (25%), Positives = 131/303 (43%), Gaps = 13/303 (4%)
Frame = -1
Query: 947 YSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFG 768
YS ++D L +D ++ ++ +EK+ + V+I G K + A++
Sbjct: 310 YSCLIDGLF---RAKRYDEAYAWYRKMFEEKIEPDVVLYGVIIRGLSEAGKVKDAMKLLS 366
Query: 767 RMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSG 588
M D P++ N + + K + TF++LI G+C++G
Sbjct: 367 DMSDRGIVPDIYCYNALIKGFCDLGLLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNG 426
Query: 587 MTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLF-------------SLM 447
M DA +LF++M + G PS T+ ++ GLCKA A+ LF L
Sbjct: 427 MVDDAQKLFNKMEKAGCFPSVGTFNALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLS 486
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRI 267
+ D A+ +++ +C G I +A+ + + G I ++ +I+G + I
Sbjct: 487 QGGNRVHDKASLQTMVEQYCTSGLIHKAYKILMQLAESGNLPDIITYNILINGFCKVGNI 546
Query: 266 GEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTVCWGRLNRFS 87
A KLF+++ GL PD + Y +I GL R EDA +F M G + +
Sbjct: 547 NGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQMPQNGCTPSPAVYKSL 606
Query: 86 MTW 78
MTW
Sbjct: 607 MTW 609
Score = 89.7 bits (221), Expect = 2e-15
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI+G CK G AL+LF E+ +G+ P S+TY +++GL + R DA ++F M
Sbjct: 532 TYNILINGFCKVGNINGALKLFKELQLKGLSPDSVTYGTLINGLQRVDREEDAFRIFEQM 591
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSF------RDDGFKVGIRGFSCMIDGL 285
+GCTP A Y +L+ C+ +I AF L+ + RDD I F + G
Sbjct: 592 PQNGCTPSPAVYKSLMTWSCRRRKISLAFSLWLQYLRDISGRDDESMKSIEEF--LQKGK 649
Query: 284 IRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMI 129
+ + G E F K+ D L P Y+I + GL + ++++A N+F ++
Sbjct: 650 VENAIQGLLEMDF-KLNDFQLAP----YTIWLIGLCQDGQVKEAFNIFSILV 696
Score = 75.9 bits (185), Expect = 4e-11
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 20/232 (8%)
Frame = -1
Query: 881 VLDELRDEKVSV-------SANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACN 723
+LD+ R +V + + + F +LI G R + A + F +M+ C P++ N
Sbjct: 392 LLDQARSLQVEIWKRDSLPNTHTFTILICGMCRNGMVDDAQKLFNKMEKAGCFPSVGTFN 451
Query: 722 XXXXXXXXXXXXXXXXXV-YNMMLKSN-----------YRVRCD-TFSVLIDGLCKSGMT 582
+ Y M + N RV + +++ C SG+
Sbjct: 452 ALIDGLCKAGELEKANLLFYKMEIGKNPTLFLRLSQGGNRVHDKASLQTMVEQYCTSGLI 511
Query: 581 QDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNAL 402
A ++ ++ E G LP ITY ++++G CK + A KLF ++ G +PDS TY L
Sbjct: 512 HKAYKILMQLAESGNLPDIITYNILINGFCKVGNINGALKLFKELQLKGLSPDSVTYGTL 571
Query: 401 LDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLF 246
++G + + ++AF +F+ +G + ++ R ++I A L+
Sbjct: 572 INGLQRVDREEDAFRIFEQMPQNGCTPSPAVYKSLMTWSCRRRKISLAFSLW 623
Score = 63.2 bits (152), Expect = 2e-07
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNG++ +AQ++FN MEK GC PS TFNALIDGLCK G+LE
Sbjct: 424 RNGMVDDAQKLFNKMEKAGCFPSVGTFNALIDGLCKAGELE 464
>gb|EMJ14826.1| hypothetical protein PRUPE_ppa002066mg [Prunus persica]
Length = 722
Score = 276 bits (705), Expect(2) = 4e-77
Identities = 136/277 (49%), Positives = 190/277 (68%)
Frame = -1
Query: 944 SLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGR 765
S ++DML+ D+ F+LYW L++LRD + + + AF VLI GY +L AEKAVETFGR
Sbjct: 63 SSVIDMLVRDDA---FELYWRTLEQLRDCGLPIGSAAFAVLINGYAKLDMAEKAVETFGR 119
Query: 764 MKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGM 585
MKD+NCKPN A N VYN MLKSN+ +T+ +L++G CK+
Sbjct: 120 MKDFNCKPNAFAYNAILYVMVRKELFLLALAVYNQMLKSNHSPSRNTYDILMNGFCKTRQ 179
Query: 584 TQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNA 405
TQDAL++FDEMT+RGI P++ITYT+++SGLC+AKRTH+A+ L +MK SGC PD TYNA
Sbjct: 180 TQDALQMFDEMTQRGIAPNTITYTIVVSGLCQAKRTHEAYTLVEMMKASGCPPDLITYNA 239
Query: 404 LLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVG 225
LLDG+CK G I EA+ L +SF DG+ +G+ G++C+I GL + R EA + K+ G
Sbjct: 240 LLDGYCKSGSIGEAYALLRSFERDGYVLGLNGYTCLIHGLFIAGRFDEAHGWYSKMIKKG 299
Query: 224 LVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTV 114
+ PD++L +I+IRGLS++ R++DA N +M +G V
Sbjct: 300 IKPDIVLCTIIIRGLSDAGRVKDALNFLNEMNERGLV 336
Score = 41.2 bits (95), Expect(2) = 4e-77
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDG 10
GLL EA+ + D+ KL C P+A T+ LI G+CK+G
Sbjct: 353 GLLDEARSLHLDISKLDCFPNACTYTILICGMCKNG 388
Score = 108 bits (269), Expect = 7e-21
Identities = 75/310 (24%), Positives = 133/310 (42%), Gaps = 18/310 (5%)
Frame = -1
Query: 953 VLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVET 774
+ Y+ ++D G S +++L + + N + LI G + + ++A
Sbjct: 235 ITYNALLD---GYCKSGSIGEAYALLRSFERDGYVLGLNGYTCLIHGLFIAGRFDEAHGW 291
Query: 773 FGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCK 594
+ +M KP++ C N M + ++ +I G C
Sbjct: 292 YSKMIKKGIKPDIVLCTIIIRGLSDAGRVKDALNFLNEMNERGLVPDAYCYNAVIKGFCD 351
Query: 593 SGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSAT 414
G+ +A L ++++ P++ TYT+++ G+CK +A ++F+ M+ GC P T
Sbjct: 352 LGLLDEARSLHLDISKLDCFPNACTYTILICGMCKNGLVGEAQQIFNEMEKLGCVPSVVT 411
Query: 413 YNALLDGFC------------------KCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDG 288
+NAL+DG C + G I +A+ L D G I ++ +I+G
Sbjct: 412 FNALIDGLCSNRITDSASLQTKVEQLCELGLILKAYKLLTQLADSGVTPDIITYNILING 471
Query: 287 LIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTVCW 108
++ I A KLF+ + GL PD I Y +I GL R EDA +F M+ G +
Sbjct: 472 FCKAGNINGAFKLFKNMQLKGLSPDSITYGTLIDGLQRVDREEDAFVVFDQMVKNGCMPS 531
Query: 107 GRLNRFSMTW 78
+ + MTW
Sbjct: 532 SAVYKSLMTW 541
Score = 102 bits (253), Expect = 5e-19
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 18/180 (10%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDA------- 468
T+++LI G+CK+G+ +A ++F+EM + G +PS +T+ ++ GLC + T A
Sbjct: 376 TYTILICGMCKNGLVGEAQQIFNEMEKLGCVPSVVTFNALIDGLCSNRITDSASLQTKVE 435
Query: 467 -----------HKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKV 321
+KL + + +SG TPD TYN L++GFCK G I+ AF LFK+ + G
Sbjct: 436 QLCELGLILKAYKLLTQLADSGVTPDIITYNILINGFCKAGNINGAFKLFKNMQLKGLSP 495
Query: 320 GIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMF 141
+ +IDGL R R +A +F ++ G +P +Y ++ +++ A +++
Sbjct: 496 DSITYGTLIDGLQRVDREEDAFVVFDQMVKNGCMPSSAVYKSLMTWSCRRKKISLAFSLW 555
Score = 97.8 bits (242), Expect = 9e-18
Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Frame = -1
Query: 899 FDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNX 720
F L +V +++ S S N + +L+ G+ + R+ + A++ F M PN
Sbjct: 145 FLLALAVYNQMLKSNHSPSRNTYDILMNGFCKTRQTQDALQMFDEMTQRGIAPNTITYTI 204
Query: 719 XXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRL-------- 564
+ MM S T++ L+DG CKSG +A L
Sbjct: 205 VVSGLCQAKRTHEAYTLVEMMKASGCPPDLITYNALLDGYCKSGSIGEAYALLRSFERDG 264
Query: 563 --------------------FDE-------MTERGILPSSITYTVILSGLCKAKRTHDAH 465
FDE M ++GI P + T+I+ GL A R DA
Sbjct: 265 YVLGLNGYTCLIHGLFIAGRFDEAHGWYSKMIKKGIKPDIVLCTIIIRGLSDAGRVKDAL 324
Query: 464 KLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGL 285
+ M G PD+ YNA++ GFC G +DEA L ++ +I G+
Sbjct: 325 NFLNEMNERGLVPDAYCYNAVIKGFCDLGLLDEARSLHLDISKLDCFPNACTYTILICGM 384
Query: 284 IRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDAT 150
++ +GEA+++F ++ +G VP ++ ++ +I GL +R + A+
Sbjct: 385 CKNGLVGEAQQIFNEMEKLGCVPSVVTFNALIDGLCSNRITDSAS 429
Score = 84.3 bits (207), Expect = 1e-13
Identities = 77/316 (24%), Positives = 133/316 (42%), Gaps = 62/316 (19%)
Frame = -1
Query: 881 VLDELRDEKVSVS-------ANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAA-- 729
+LDE R + +S A + +LI G + +A + F M+ C P++
Sbjct: 354 LLDEARSLHLDISKLDCFPNACTYTILICGMCKNGLVGEAQQIFNEMEKLGCVPSVVTFN 413
Query: 728 ------CNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCD-----------TFSVLIDGL 600
C+ ++LK+ Y++ T+++LI+G
Sbjct: 414 ALIDGLCSNRITDSASLQTKVEQLCELGLILKA-YKLLTQLADSGVTPDIITYNILINGF 472
Query: 599 CKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDS 420
CK+G A +LF M +G+ P SITY ++ GL + R DA +F M +GC P S
Sbjct: 473 CKAGNINGAFKLFKNMQLKGLSPDSITYGTLIDGLQRVDREEDAFVVFDQMVKNGCMPSS 532
Query: 419 ATYNALLDGFCKCGQIDEAFMLFKSFR--------------DDGFKVG-----IRGF--- 306
A Y +L+ C+ +I AF L+ + ++ FK G IRG
Sbjct: 533 AVYKSLMTWSCRRKKISLAFSLWLKYLSNLPLREEEKIKAIEEDFKEGKTEKAIRGLLEM 592
Query: 305 ------------SCMIDGLIRSKRIGEAEKLFQKV--FDVGLVPDLILYSIMIRGLSESR 168
+ ++ GL + +R+ EA ++F + + V + P ++ +I GL +
Sbjct: 593 DVNFKDFDLVPCTILLIGLCQVRRVHEALRIFSVLDEYKVIVTPPSCVH--LINGLCKEG 650
Query: 167 RLEDATNMFRDMIGKG 120
L+ A +FR + KG
Sbjct: 651 NLDLAIGVFRYTLEKG 666
Score = 67.8 bits (164), Expect = 1e-08
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKD 13
+NGL+GEAQQIFN+MEKLGC PS VTFNALIDGLC +
Sbjct: 386 KNGLVGEAQQIFNEMEKLGCVPSVVTFNALIDGLCSN 422
>ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335093|gb|EFH65511.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 780
Score = 286 bits (731), Expect(2) = 2e-75
Identities = 151/340 (44%), Positives = 214/340 (62%), Gaps = 1/340 (0%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EV+ ++ PI P+L L PFL++ II SV+K + + ++ FRFFIWA+ + R RS
Sbjct: 36 EVISILAKKKPIEPALEPLVPFLSKNIITSVIKEEV----NRQLGFRFFIWASRRERLRS 91
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
G + L++DML N DLYW L+EL+ VSV + F VLI Y ++ AEKAVE
Sbjct: 92 GESFGLVIDML---SEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVE 148
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXV-YNMMLKSNYRVRCDTFSVLIDGL 600
+FGRMK+++C+P++ N YN MLK N TF +L+DGL
Sbjct: 149 SFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGL 208
Query: 599 CKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDS 420
K G T DA ++FD+MT RGI P+ +TYT+++SGLC+ DA KLF MK SG PDS
Sbjct: 209 YKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDS 268
Query: 419 ATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQK 240
+NALLDGFCK G++ EAF L + F DGF +G+RG+S +IDGL R++R +A +L+
Sbjct: 269 VAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYAN 328
Query: 239 VFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG 120
+ + PD+ILY+I+I+GLS++ ++EDA + R M KG
Sbjct: 329 MLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKG 368
Score = 25.4 bits (54), Expect(2) = 2e-75
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDG 10
GLL E + + +M + P A T LI +C++G
Sbjct: 387 GLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Score = 89.7 bits (221), Expect = 2e-15
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 8/243 (3%)
Frame = -1
Query: 824 LILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSN 645
LI G +R R+ +A E + M N KP++ + M
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKG 368
Query: 644 YRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAH 465
++ +I LC G+ ++ L EM+E P + T+T+++ +C+ A
Sbjct: 369 ITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAE 428
Query: 464 KLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDG--------FKVGIRG 309
++F ++ SGC+P AT+NAL+DG CK G++ EA +L G R
Sbjct: 429 EIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRS 488
Query: 308 FSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMI 129
F D +++S I +A K D G PD++ Y+++I G ++ A + +
Sbjct: 489 F----DTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQ 544
Query: 128 GKG 120
KG
Sbjct: 545 LKG 547
Score = 76.6 bits (187), Expect = 2e-11
Identities = 67/291 (23%), Positives = 115/291 (39%), Gaps = 35/291 (12%)
Frame = -1
Query: 899 FDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNX 720
F L ++V +E+ S + F +L+ G ++ + A + F M PN
Sbjct: 179 FMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 719 XXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDA---LRLFDE-- 555
++ M S + L+DG CK G +A LRLF++
Sbjct: 239 LISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 554 ------------------------------MTERGILPSSITYTVILSGLCKAKRTHDAH 465
M +R I P I YT+++ GL KA + DA
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDAL 358
Query: 464 KLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGL 285
KL M + G TPD+ YNA++ C G ++E L + + +I +
Sbjct: 359 KLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSM 418
Query: 284 IRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDM 132
R+ + +AE++F ++ G P + ++ +I GL +S L++A + M
Sbjct: 419 CRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 66.2 bits (160), Expect = 3e-08
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 39/168 (23%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDA----------------LRL-------FDEMTERGIL------ 534
TF+ LIDGLCKSG ++A LRL FD M + G +
Sbjct: 445 TFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKN 504
Query: 533 ----------PSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCK 384
P ++Y V+++G C+ A KL ++++ G +PDS TYN L++G +
Sbjct: 505 LAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHR 564
Query: 383 CGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQK 240
G+ +EAF LF + D F+ + ++ R +++ A L+ K
Sbjct: 565 VGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMK 610
Score = 61.6 bits (148), Expect = 7e-07
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNGL+ +A++IF ++EK GCSPS TFNALIDGLCK G+L+
Sbjct: 420 RNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELK 460
Score = 58.2 bits (139), Expect = 8e-06
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 2/205 (0%)
Frame = -1
Query: 881 VLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXX 702
+L+ L+ + +S + + LI G R+ + E+A + F D+ P +
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV-----YRSLMT 593
Query: 701 XXXXXXXXXXVYNMMLKSNYRVRC--DTFSVLIDGLCKSGMTQDALRLFDEMTERGILPS 528
+N+ +K ++ C D + I+ K G T+ ALR E+ R +
Sbjct: 594 WSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELT 653
Query: 527 SITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFK 348
YT+ L GLC++ R H+A +FS+++ + L+ G CK Q+D A +F
Sbjct: 654 LGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIDVFL 713
Query: 347 SFRDDGFKVGIRGFSCMIDGLIRSK 273
D+ FK+ R + ++ L++S+
Sbjct: 714 YTLDNNFKLMPRVCNYLLSSLLQSR 738
>gb|EPS65333.1| hypothetical protein M569_09443, partial [Genlisea aurea]
Length = 564
Score = 274 bits (701), Expect(2) = 2e-74
Identities = 141/255 (55%), Positives = 177/255 (69%)
Frame = -1
Query: 878 LDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXXX 699
LDE +++ + V A+AFVVL+LGYWRL+K EK VETF +M DY PNLAA N
Sbjct: 1 LDEFQNQNLPVYADAFVVLMLGYWRLKKVEKVVETFSKMSDYGRTPNLAAYNVLLNVLVK 60
Query: 698 XXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSIT 519
VYNM+LKSN V TF VLIDGL + GM QDAL LFDEMT RG P T
Sbjct: 61 NNLIILAMAVYNMLLKSNRDVDNATFDVLIDGLFRGGMIQDALNLFDEMTVRGFSPGLKT 120
Query: 518 YTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFR 339
YTV++SGLCKAKR DA ++++M ++G PDS NALLDGF KCGQID+AF L SF+
Sbjct: 121 YTVVISGLCKAKRPLDASSMYNVMTSNGFKPDSICCNALLDGFSKCGQIDDAFKLIVSFK 180
Query: 338 DDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLE 159
++G+ VG+ GFSCMIDGLIR++R EAE+LF +V +V L PDL+LY+IMIRGL + R++
Sbjct: 181 EEGYDVGLHGFSCMIDGLIRARRFNEAEELFNRVANVVLKPDLVLYTIMIRGLCDVGRVK 240
Query: 158 DATNMFRDMIGKGTV 114
DA+ M M G +
Sbjct: 241 DASKMLEHMTANGVM 255
Score = 33.9 bits (76), Expect(2) = 2e-74
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKL 4
GLL EA+ + ++ K G P T+ LI GLC++G L
Sbjct: 272 GLLDEAKSLELEISKHGQLPDTCTYTILISGLCRNGLL 309
Score = 125 bits (313), Expect(2) = 1e-26
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 14/289 (4%)
Frame = -1
Query: 944 SLMVDMLLGGDSG-NSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFG 768
S+ + LL G S D + ++ ++E V + F +I G R R+ +A E F
Sbjct: 153 SICCNALLDGFSKCGQIDDAFKLIVSFKEEGYDVGLHGFSCMIDGLIRARRFNEAEELFN 212
Query: 767 RMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSG 588
R+ + KP+L + M + F+VLI G C +G
Sbjct: 213 RVANVVLKPDLVLYTIMIRGLCDVGRVKDASKMLEHMTANGVMPDTRCFNVLIKGFCDAG 272
Query: 587 MTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYN 408
+ +A L E+++ G LP + TYT+++SGLC+ +A K+FS M++ GC+P +AT+N
Sbjct: 273 LLDEAKSLELEISKHGQLPDTCTYTILISGLCRNGLLGEAGKMFSDMESRGCSPSAATFN 332
Query: 407 ALLDGFCKCGQIDEA-FMLFKSFRDDGFKVGIR------------GFSCMIDGLIRSKRI 267
AL+DG CK G + EA LFK + +R M++ ++ S I
Sbjct: 333 ALIDGLCKAGDLSEAQLTLFKMEIGRNPSLFLRLTQGSERVLDRDSLRKMVENMVTSGSI 392
Query: 266 GEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG 120
+A KL ++ D G+VPD++ Y+I+I G+ + ++ A +F + KG
Sbjct: 393 LKAYKLLIQLSDCGVVPDIMTYNILINGMCRADKISIALKLFERLRLKG 441
Score = 23.1 bits (48), Expect(2) = 1e-26
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -3
Query: 108 GEAQQIFNDMEKLGCSPSAVTFNALIDGLCK 16
G+A ++ M K C P++ F L+ C+
Sbjct: 463 GDALTLYEQMCKSACKPNSDVFKTLMVWSCR 493
Score = 77.4 bits (189), Expect = 1e-11
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 48/194 (24%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKA------------- 486
T+++LI GLC++G+ +A ++F +M RG PS+ T+ ++ GLCKA
Sbjct: 295 TYTILISGLCRNGLLGEAGKMFSDMESRGCSPSAATFNALIDGLCKAGDLSEAQLTLFKM 354
Query: 485 ----------------KRTHD-------------------AHKLFSLMKNSGCTPDSATY 411
+R D A+KL + + G PD TY
Sbjct: 355 EIGRNPSLFLRLTQGSERVLDRDSLRKMVENMVTSGSILKAYKLLIQLSDCGVVPDIMTY 414
Query: 410 NALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFD 231
N L++G C+ +I A LF+ R G ++ +I+GL R++R G+A L++++
Sbjct: 415 NILINGMCRADKISIALKLFERLRLKGCSPDSVTYATLINGLYRARRDGDALTLYEQMCK 474
Query: 230 VGLVPDLILYSIMI 189
P+ ++ ++
Sbjct: 475 SACKPNSDVFKTLM 488
Score = 66.6 bits (161), Expect = 2e-08
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKL 4
RNGLLGEA ++F+DME GCSPSA TFNALIDGLCK G L
Sbjct: 305 RNGLLGEAGKMFSDMESRGCSPSAATFNALIDGLCKAGDL 344
Score = 66.2 bits (160), Expect = 3e-08
Identities = 27/94 (28%), Positives = 57/94 (60%)
Frame = -1
Query: 629 DTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSL 450
D+ +++ + SG A +L ++++ G++P +TY ++++G+C+A + A KLF
Sbjct: 377 DSLRKMVENMVTSGSILKAYKLLIQLSDCGVVPDIMTYNILINGMCRADKISIALKLFER 436
Query: 449 MKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFK 348
++ GC+PDS TY L++G + + +A L++
Sbjct: 437 LRLKGCSPDSVTYATLINGLYRARRDGDALTLYE 470
Score = 65.1 bits (157), Expect = 6e-08
Identities = 28/81 (34%), Positives = 50/81 (61%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI+G+C++ AL+LF+ + +G P S+TY +++GL +A+R DA L+ M
Sbjct: 413 TYNILINGMCRADKISIALKLFERLRLKGCSPDSVTYATLINGLYRARRDGDALTLYEQM 472
Query: 446 KNSGCTPDSATYNALLDGFCK 384
S C P+S + L+ C+
Sbjct: 473 CKSACKPNSDVFKTLMVWSCR 493
>ref|XP_004295543.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g79540-like [Fragaria vesca subsp. vesca]
Length = 768
Score = 271 bits (693), Expect(2) = 3e-74
Identities = 135/299 (45%), Positives = 197/299 (65%)
Frame = -1
Query: 1010 RISFRFFIWAAGKRRFRSGVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAF 831
+++FR FIWA + + + +S +VDML+ D FD+YWS + ELRD V + AF
Sbjct: 60 QLAFRVFIWATQRSKVCTRTCHSAIVDMLVKDDK--RFDIYWSTMQELRDCGVGIGCGAF 117
Query: 830 VVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLK 651
VLI GY RL AEKAVE F +M++++CKP++ N VYN MLK
Sbjct: 118 SVLIRGYERLGNAEKAVEAFVKMEEFDCKPDVYTYNAVLYVMVRKEVFLLALAVYNQMLK 177
Query: 650 SNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHD 471
N T+S+LI+G CK+ TQDAL++FDEM +RGI P ++TYT+I+SGLC+AKR H+
Sbjct: 178 CNLSPTRSTYSILINGFCKTRKTQDALQMFDEMAQRGIAPDTVTYTIIVSGLCQAKRAHE 237
Query: 470 AHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMID 291
AH+L M+ +GC P+ TY+ALLDG+CK G++DEA+ L +SF+ G+ +G+ G+S +I
Sbjct: 238 AHRLVDKMRETGCVPNIVTYHALLDGYCKLGRLDEAYALVRSFQRIGYVLGVEGYSSLIF 297
Query: 290 GLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTV 114
GL R++R EA L+ K+ G+ PD+IL +I+I+GLS++ R++DA +M KG V
Sbjct: 298 GLFRARRFDEALGLYGKLLGEGIEPDVILCTILIKGLSDAGRVKDALXFLGEMSKKGLV 356
Score = 36.2 bits (82), Expect(2) = 3e-74
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDG 10
GLL EA+ + ++ K C P+A T+ LI G+C++G
Sbjct: 373 GLLDEARSLHLEISKQDCFPNACTYTILICGMCRNG 408
Score = 111 bits (277), Expect = 8e-22
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Frame = -1
Query: 881 VLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXX 702
+ DE+ ++ + +++ G + ++A +A +M++ C PN+ +
Sbjct: 206 MFDEMAQRGIAPDTVTYTIIVSGLCQAKRAHEAHRLVDKMRETGCVPNIVTYHALLDGYC 265
Query: 701 XXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSI 522
+ + Y + + +S LI GL ++ +AL L+ ++ GI P I
Sbjct: 266 KLGRLDEAYALVRSFQRIGYVLGVEGYSSLIFGLFRARRFDEALGLYGKLLGEGIEPDVI 325
Query: 521 TYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSF 342
T+++ GL A R DA M G PD+ YNA++ GFC G +DEA L
Sbjct: 326 LCTILIKGLSDAGRVKDALXFLGEMSKKGLVPDAYCYNAVIKGFCDLGLLDEARSLHLEI 385
Query: 341 RDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRL 162
++ +I G+ R+ +GEAE++F ++ +G VP ++ ++ +I GL ++ +L
Sbjct: 386 SKQDCFPNACTYTILICGMCRNGLVGEAEQIFNEMEKLGCVPCVVTFNALIDGLCKASKL 445
Query: 161 EDATNMFRDM-IGKGTVCWGRLNRFS 87
+DA +F M IG+ + RL++ S
Sbjct: 446 KDAHMLFYKMEIGRKPSLFLRLSQGS 471
Score = 108 bits (271), Expect = 4e-21
Identities = 75/299 (25%), Positives = 128/299 (42%), Gaps = 13/299 (4%)
Frame = -1
Query: 929 MLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYN 750
++ G FD + +L E + +LI G + + A+ G M
Sbjct: 295 LIFGLFRARRFDEALGLYGKLLGEGIEPDVILCTILIKGLSDAGRVKDALXFLGEMSKKG 354
Query: 749 CKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDAL 570
P+ N ++ + K + T+++LI G+C++G+ +A
Sbjct: 355 LVPDAYCYNAVIKGFCDLGLLDEARSLHLEISKQDCFPNACTYTILICGMCRNGLVGEAE 414
Query: 569 RLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLF-------------SLMKNSGCT 429
++F+EM + G +P +T+ ++ GLCKA + DAH LF L + S
Sbjct: 415 QIFNEMEKLGCVPCVVTFNALIDGLCKASKLKDAHMLFYKMEIGRKPSLFLRLSQGSDRI 474
Query: 428 PDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKL 249
DSA+ ++ C G I +A+ L G I ++ +IDG +S + A KL
Sbjct: 475 IDSASLQKKVEQLCDSGLILQAYKLLIQLASSGVAPDIITYNTLIDGFCKSGNMDGAFKL 534
Query: 248 FQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTVCWGRLNRFSMTWKS 72
F+ + G+ PD + Y +I GL + R EDA +F M+ G + + MTW S
Sbjct: 535 FKDMQLKGITPDSVTYGTLIDGLQRAEREEDAFLVFNQMVKNGCTPSAEVYKSLMTWSS 593
Score = 85.5 bits (210), Expect(2) = 2e-15
Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T++ LIDG CKSG A +LF +M +GI P S+TY ++ GL +A+R DA +F+ M
Sbjct: 514 TYNTLIDGFCKSGNMDGAFKLFKDMQLKGITPDSVTYGTLIDGLQRAEREEDAFLVFNQM 573
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSF------RDDGFKVGIRGFSCMIDGL 285
+GCTP + Y +L+ + ++ + L+ + RD+ I+ +
Sbjct: 574 VKNGCTPSAEVYKSLMTWSSRNRKVTLSLSLWLKYLRSLPNRDE----------VTIEAI 623
Query: 284 IRSKRIGEAEKLFQKVFDVGLV---PDLILYSIMIRGLSESRRLEDATNMF 141
++ + G+ EK Q + ++ + DL Y+I++ GL + +R+++A MF
Sbjct: 624 EKNFKEGQIEKAIQGLLEMDVQFKNLDLGPYTILLIGLCQVQRVDEALRMF 674
Score = 25.0 bits (53), Expect(2) = 2e-15
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = -3
Query: 105 EAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
EA ++F+ +++ + + + LIDGLC++G L+
Sbjct: 669 EALRMFSVLQEYKVNITPPSCVHLIDGLCREGNLD 703
Score = 70.5 bits (171), Expect = 2e-09
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNGL+GEA+QIFN+MEKLGC P VTFNALIDGLCK KL+
Sbjct: 406 RNGLVGEAEQIFNEMEKLGCVPCVVTFNALIDGLCKASKLK 446
>ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g79540 gi|4835755|gb|AAD30222.1|AC007202_4 Contains
similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana BAC
gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 280 bits (717), Expect(2) = 8e-74
Identities = 148/340 (43%), Positives = 212/340 (62%), Gaps = 1/340 (0%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EV+ ++ PI P+L L PFL++ II SV+K + + ++ FRFFIWA+ + R RS
Sbjct: 36 EVISILAKKKPIEPALEPLVPFLSKNIITSVIKDEV----NRQLGFRFFIWASRRERLRS 91
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
+ L++DML N DLYW L+EL+ VSV + F VLI Y ++ AEKAVE
Sbjct: 92 RESFGLVIDML---SEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVE 148
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXV-YNMMLKSNYRVRCDTFSVLIDGL 600
+FGRMK+++C+P++ N YN MLK N TF +L+DGL
Sbjct: 149 SFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGL 208
Query: 599 CKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDS 420
K G T DA ++FD+MT RGI P+ +TYT+++SGLC+ DA KLF M+ SG PDS
Sbjct: 209 YKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDS 268
Query: 419 ATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQK 240
+NALLDGFCK G++ EAF L + F DGF +G+RG+S +IDGL R++R +A +L+
Sbjct: 269 VAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYAN 328
Query: 239 VFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG 120
+ + PD+ILY+I+I+GLS++ ++EDA + M KG
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Score = 25.4 bits (54), Expect(2) = 8e-74
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDG 10
GLL E + + +M + P A T LI +C++G
Sbjct: 387 GLLEEGRSLQLEMSETESFPDACTHTILICSMCRNG 422
Score = 91.3 bits (225), Expect = 8e-16
Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 8/243 (3%)
Frame = -1
Query: 824 LILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSN 645
LI G +R R+ +A E + M N KP++ + + M
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 644 YRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAH 465
++ +I LC G+ ++ L EM+E P + T+T+++ +C+ +A
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 464 KLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDG--------FKVGIRG 309
++F+ ++ SGC+P AT+NAL+DG CK G++ EA +L G R
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRS 488
Query: 308 FSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMI 129
F M++ S I +A + D G PD++ Y+++I G + ++ A + +
Sbjct: 489 FDTMVE----SGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 128 GKG 120
KG
Sbjct: 545 LKG 547
Score = 78.2 bits (191), Expect = 7e-12
Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 36/304 (11%)
Frame = -1
Query: 899 FDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNX 720
F L ++V +E+ S + F +L+ G ++ + A + F M PN
Sbjct: 179 FMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 719 XXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDA---LRLFDE-- 555
++ M S + L+DG CK G +A LRLF++
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 554 ------------------------------MTERGILPSSITYTVILSGLCKAKRTHDAH 465
M ++ I P I YT+++ GL KA + DA
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDAL 358
Query: 464 KLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGL 285
KL S M + G +PD+ YNA++ C G ++E L + + +I +
Sbjct: 359 KLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSM 418
Query: 284 IRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDM-IGKGTVCW 108
R+ + EAE++F ++ G P + ++ +I GL +S L++A + M +G+ +
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLF 478
Query: 107 GRLN 96
RL+
Sbjct: 479 LRLS 482
Score = 70.1 bits (170), Expect = 2e-09
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 39/168 (23%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDA----------------LRL-------FDEMTERGIL------ 534
TF+ LIDGLCKSG ++A LRL FD M E G +
Sbjct: 445 TFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRD 504
Query: 533 ----------PSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCK 384
P ++Y V+++G C+A A KL ++++ G +PDS TYN L++G +
Sbjct: 505 LAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHR 564
Query: 383 CGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQK 240
G+ +EAF LF + D F+ + ++ R +++ A L+ K
Sbjct: 565 VGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMK 610
Score = 64.3 bits (155), Expect = 1e-07
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNGL+ EA++IF ++EK GCSPS TFNALIDGLCK G+L+
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELK 460
>ref|XP_006389878.1| hypothetical protein EUTSA_v10018150mg [Eutrema salsugineum]
gi|557086312|gb|ESQ27164.1| hypothetical protein
EUTSA_v10018150mg [Eutrema salsugineum]
Length = 781
Score = 278 bits (712), Expect(2) = 1e-73
Identities = 148/340 (43%), Positives = 213/340 (62%), Gaps = 1/340 (0%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EV+ ++ PI P+L L PFL+++II SV+K Q + ++ FRFFIWA+ + R RS
Sbjct: 38 EVISILAKKKPIEPALEPLVPFLSQKIITSVIKDQV----NRQLGFRFFIWASRRERLRS 93
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
+ L++++L N DLYW L+EL+ VSV + F VLI Y ++ AEKAVE
Sbjct: 94 RESFRLVINIL---SEENGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVE 150
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXV-YNMMLKSNYRVRCDTFSVLIDGL 600
+FGRMK+++C+P++ N YN MLK N TF +L+DGL
Sbjct: 151 SFGRMKEFDCRPDVFTYNVILQVMMREEVFFMLAFAVYNEMLKCNCSPNRYTFGILMDGL 210
Query: 599 CKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDS 420
K G DA ++FD+MT RGI P+ +TYT+++SGLC+ DA +LF MK G +PDS
Sbjct: 211 YKKGRMVDAQKMFDDMTARGISPNRVTYTILISGLCQRGSAEDARRLFHEMKAGGHSPDS 270
Query: 419 ATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQK 240
A NALLDGFCK G++ EAF L + F DGF +G+RG+S +IDGL R+ R EA +L+
Sbjct: 271 AALNALLDGFCKSGRMVEAFELLRLFEKDGFILGLRGYSSLIDGLFRASRYDEAFELYAT 330
Query: 239 VFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG 120
+ + + PD++LY+I+IRGLS++ ++EDA +F M KG
Sbjct: 331 MLEKNIKPDVLLYTILIRGLSKAGKIEDALKLFSSMSSKG 370
Score = 26.6 bits (57), Expect(2) = 1e-73
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDG 10
GLL EA+ + +M + P A T LI +C++G
Sbjct: 389 GLLEEARSLQLEMSETESFPDASTHTILICSMCRNG 424
Score = 87.0 bits (214), Expect(2) = 8e-18
Identities = 71/304 (23%), Positives = 129/304 (42%), Gaps = 36/304 (11%)
Frame = -1
Query: 899 FDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNX 720
F L ++V +E+ S + F +L+ G ++ + A + F M PN
Sbjct: 181 FMLAFAVYNEMLKCNCSPNRYTFGILMDGLYKKGRMVDAQKMFDDMTARGISPNRVTYTI 240
Query: 719 XXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDA---LRLFDE-- 555
+++ M + + L+DG CKSG +A LRLF++
Sbjct: 241 LISGLCQRGSAEDARRLFHEMKAGGHSPDSAALNALLDGFCKSGRMVEAFELLRLFEKDG 300
Query: 554 ------------------------------MTERGILPSSITYTVILSGLCKAKRTHDAH 465
M E+ I P + YT+++ GL KA + DA
Sbjct: 301 FILGLRGYSSLIDGLFRASRYDEAFELYATMLEKNIKPDVLLYTILIRGLSKAGKIEDAL 360
Query: 464 KLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGL 285
KLFS M + G PD+ YNA++ C+ G ++EA L + + +I +
Sbjct: 361 KLFSSMSSKGIRPDTYCYNAVIKALCEQGLLEEARSLQLEMSETESFPDASTHTILICSM 420
Query: 284 IRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDM-IGKGTVCW 108
R+ + +AE++F+++ G+ P + ++ +I GL +S L++A + M +G+ +
Sbjct: 421 CRNGLVRKAEEIFKEIEKRGISPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLF 480
Query: 107 GRLN 96
RL+
Sbjct: 481 LRLS 484
Score = 31.6 bits (70), Expect(2) = 8e-18
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -3
Query: 108 GEAQQIFNDMEKL---GCSPSAVTFNALIDGLCKDGKLE 1
G + + D+ L G SP VT+N LI+G CK G ++
Sbjct: 499 GSILKAYKDLAHLADAGNSPDIVTYNVLINGFCKAGNID 537
Score = 96.3 bits (238), Expect = 3e-17
Identities = 58/240 (24%), Positives = 112/240 (46%), Gaps = 5/240 (2%)
Frame = -1
Query: 824 LILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSN 645
LI G +R + ++A E + M + N KP++ +++ M
Sbjct: 311 LIDGLFRASRYDEAFELYATMLEKNIKPDVLLYTILIRGLSKAGKIEDALKLFSSMSSKG 370
Query: 644 YRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAH 465
R ++ +I LC+ G+ ++A L EM+E P + T+T+++ +C+ A
Sbjct: 371 IRPDTYCYNAVIKALCEQGLLEEARSLQLEMSETESFPDASTHTILICSMCRNGLVRKAE 430
Query: 464 KLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDG-----FKVGIRGFSC 300
++F ++ G +P AT+NAL+DG CK G++ EA +L ++ G +
Sbjct: 431 EIFKEIEKRGISPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGGNR 490
Query: 299 MIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG 120
D ++ S I +A K + D G PD++ Y+++I G ++ ++ A + + KG
Sbjct: 491 SFDTMVESGSILKAYKDLAHLADAGNSPDIVTYNVLINGFCKAGNIDGALKLLNVLQLKG 550
Score = 73.9 bits (180), Expect = 1e-10
Identities = 53/169 (31%), Positives = 79/169 (46%), Gaps = 40/169 (23%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDA----------------LRL--------FDEMTERGIL----- 534
TF+ LIDGLCKSG ++A LRL FD M E G +
Sbjct: 447 TFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGGNRSFDTMVESGSILKAYK 506
Query: 533 -----------PSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFC 387
P +TY V+++G CKA A KL ++++ G +PDS TYN L++G
Sbjct: 507 DLAHLADAGNSPDIVTYNVLINGFCKAGNIDGALKLLNVLQLKGLSPDSVTYNTLINGLH 566
Query: 386 KCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQK 240
+ G+ +EAF LF + D F+ + ++ R ++I A L+ K
Sbjct: 567 RVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKIVVAFSLWMK 613
Score = 58.9 bits (141), Expect = 5e-06
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNGL+ +A++IF ++EK G SPS TFNALIDGLCK G+L+
Sbjct: 422 RNGLVRKAEEIFKEIEKRGISPSVATFNALIDGLCKSGELK 462
>ref|XP_006301385.1| hypothetical protein CARUB_v10021797mg [Capsella rubella]
gi|482570095|gb|EOA34283.1| hypothetical protein
CARUB_v10021797mg [Capsella rubella]
Length = 780
Score = 272 bits (696), Expect(2) = 1e-71
Identities = 144/340 (42%), Positives = 209/340 (61%), Gaps = 1/340 (0%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
EV+ ++ PI P+L L PFL+ +II SV+K + + R+ FRFFIWA+ + R RS
Sbjct: 36 EVISILAKKKPIEPALEPLVPFLSNKIITSVIKDEV----NPRLGFRFFIWASRRERLRS 91
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
+ L+++ML D DLYW L+EL+ VSV + F VLI Y ++ AEKAVE
Sbjct: 92 RDSFGLVINMLSQDDG---CDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVE 148
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXV-YNMMLKSNYRVRCDTFSVLIDGL 600
+FGRMK+++C+P++ N YN MLK N TF +L+DGL
Sbjct: 149 SFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNRYTFCILMDGL 208
Query: 599 CKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDS 420
K G T DA ++FD+MT RGI P+ +TYT+++SGLC+ DA KLF MK G +PDS
Sbjct: 209 YKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAEDARKLFYEMKAGGDSPDS 268
Query: 419 ATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQK 240
YNALLDGFCK G++ EAF L + F DGF +G+RG+S ++D L R+ R +A +L+
Sbjct: 269 VAYNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLVDALFRANRYAQAFELYAN 328
Query: 239 VFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG 120
+ + PD++ Y+I+I+GLS++ +++DA + M KG
Sbjct: 329 MLKNNIKPDIVFYTILIQGLSKAGKIKDALKLLSSMPSKG 368
Score = 26.2 bits (56), Expect(2) = 1e-71
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDG 10
G+L EA+ + +M + P A T LI +C++G
Sbjct: 387 GILEEARSLQLEMSEKESFPDACTHTVLICSMCRNG 422
Score = 92.0 bits (227), Expect = 5e-16
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 24/298 (8%)
Frame = -1
Query: 941 LMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSA---------NAFVVLILGY------- 810
L +M GGDS +S Y ++LD V A + FV+ + GY
Sbjct: 255 LFYEMKAGGDSPDSV-AYNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLVDAL 313
Query: 809 WRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRC 630
+R + +A E + M N KP++ + + M
Sbjct: 314 FRANRYAQAFELYANMLKNNIKPDIVFYTILIQGLSKAGKIKDALKLLSSMPSKGISPDT 373
Query: 629 DTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSL 450
++ +I LC+ G+ ++A L EM+E+ P + T+TV++ +C+ A ++F
Sbjct: 374 YCYNAVITALCERGILEEARSLQLEMSEKESFPDACTHTVLICSMCRNGLVRKAEEIFVE 433
Query: 449 MKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDG--------FKVGIRGFSCMI 294
++ SGC+P AT+NAL+DG CK G++ EA +L G R F M+
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV 493
Query: 293 DGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG 120
+ S I +A + D G PD++ Y+++I G ++ ++ A + + + KG
Sbjct: 494 E----SGSILKAYRDLAHFADTGNSPDIVTYNVLINGFCKAGDIDGALKLLKVLQLKG 547
Score = 77.4 bits (189), Expect = 1e-11
Identities = 68/304 (22%), Positives = 124/304 (40%), Gaps = 36/304 (11%)
Frame = -1
Query: 899 FDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNX 720
F L ++V +E+ S + F +L+ G ++ + A + F M PN
Sbjct: 179 FMLAFAVYNEMLKCNCSPNRYTFCILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTI 238
Query: 719 XXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDA---LRLFDE-- 555
++ M ++ L+DG CK G +A LRLF++
Sbjct: 239 LISGLCQRGSAEDARKLFYEMKAGGDSPDSVAYNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 554 ------------------------------MTERGILPSSITYTVILSGLCKAKRTHDAH 465
M + I P + YT+++ GL KA + DA
Sbjct: 299 FVLGLRGYSSLVDALFRANRYAQAFELYANMLKNNIKPDIVFYTILIQGLSKAGKIKDAL 358
Query: 464 KLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGL 285
KL S M + G +PD+ YNA++ C+ G ++EA L + + +I +
Sbjct: 359 KLLSSMPSKGISPDTYCYNAVITALCERGILEEARSLQLEMSEKESFPDACTHTVLICSM 418
Query: 284 IRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDM-IGKGTVCW 108
R+ + +AE++F ++ G P + ++ +I GL +S L++A + M +G+ +
Sbjct: 419 CRNGLVRKAEEIFVEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLF 478
Query: 107 GRLN 96
RL+
Sbjct: 479 LRLS 482
Score = 71.2 bits (173), Expect = 9e-10
Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 73/235 (31%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDA----------------LRL-------FDEMTERGIL------ 534
TF+ LIDGLCKSG ++A LRL FD M E G +
Sbjct: 445 TFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRD 504
Query: 533 ----------PSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCK 384
P +TY V+++G CKA A KL +++ G +PDS TYN L++G +
Sbjct: 505 LAHFADTGNSPDIVTYNVLINGFCKAGDIDGALKLLKVLQLKGLSPDSVTYNTLINGLHR 564
Query: 383 CGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRI--------------------- 267
G+ +EA LF + D F+ + ++ R +++
Sbjct: 565 VGREEEALKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFSLWMKYLKKISCLDDET 622
Query: 266 ----------GEAEKLFQKVFDVGLVPD---LILYSIMIRGLSESRRLEDATNMF 141
GE E+ +++ ++ D L YSI + GL +S R ++A +F
Sbjct: 623 ANEIEQCFKEGETERALRRLIELDTRKDELSLGPYSIWLIGLCQSGRFDEALMVF 677
Score = 61.6 bits (148), Expect = 7e-07
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKLE 1
RNGL+ +A++IF ++EK GCSPS TFNALIDGLCK G+L+
Sbjct: 420 RNGLVRKAEEIFVEIEKSGCSPSVATFNALIDGLCKSGELK 460
>ref|XP_006848380.1| hypothetical protein AMTR_s00013p00202120 [Amborella trichopoda]
gi|548851686|gb|ERN09961.1| hypothetical protein
AMTR_s00013p00202120 [Amborella trichopoda]
Length = 789
Score = 264 bits (675), Expect(2) = 3e-71
Identities = 137/342 (40%), Positives = 205/342 (59%), Gaps = 1/342 (0%)
Frame = -1
Query: 1136 EVLVLINSVHPIGPSLRKLDPFLNREIIVSVLKSQAQLKKDLRISFRFFIWAAGKRRFRS 957
E+ ++ V I L L P ++ ++ SVLK + KD ++ FRFFIW++ +S
Sbjct: 36 EICSILKDVEVIETPLETLTPLISPNVVASVLKEE----KDPKLGFRFFIWSSRHTALKS 91
Query: 956 GVLYSLMVDMLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVE 777
++ M+D L G F+ W +L+EL+ K +S AF V+I Y +L AEKAVE
Sbjct: 92 WDSHNSMIDKLQGMQD---FESAWKLLEELKISKHPISPEAFAVMISAYTKLGMAEKAVE 148
Query: 776 TFGRMKDYNCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLC 597
F +M ++NC+PN N VYN MLK + R TF++LI GLC
Sbjct: 149 CFSKMVEFNCRPNTFTYNTILHLLMEEEVFPVAFAVYNQMLKVDCRPNQSTFNILIGGLC 208
Query: 596 KSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSA 417
K+G TQDAL LFDEM +R I P+++TYT+++SGLC A++T DA KL M+++ C PD
Sbjct: 209 KAGKTQDALLLFDEMAKRRISPNTLTYTIVISGLCNARKTKDARKLLQTMRDNRCLPDDI 268
Query: 416 TYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKV 237
TYN +L GFCK G++DEAF L +SFR + + +G+ G++ ++DGL R+ R EA + ++ +
Sbjct: 269 TYNCMLSGFCKLGRVDEAFELLRSFRRENYMLGLNGYTTLLDGLFRAGRFEEACQYYRNM 328
Query: 236 FD-VGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKGTV 114
+ +VPD ILY+ MI+G E+ ++ A R+M KG V
Sbjct: 329 VERQNIVPDCILYTTMIKGYCEAGKINAALGFLREMTSKGLV 370
Score = 33.1 bits (74), Expect(2) = 3e-71
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDG 10
G L +A+ + ++ K C P + T+ LI GLCK+G
Sbjct: 387 GFLDKARSLRLEISKEDCFPDSTTYTILICGLCKEG 422
Score = 89.7 bits (221), Expect(2) = 2e-20
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Frame = -1
Query: 881 VLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXX 702
+L +RD + + ++ G+ +L + ++A E + N L
Sbjct: 254 LLQTMRDNRCLPDDITYNCMLSGFCKLGRVDEAFELLRSFRRENYMLGLNGYTTLLDGLF 313
Query: 701 XXXXXXXXXXVY-NMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDEMTERGILPSS 525
Y NM+ + N C ++ +I G C++G AL EMT +G++P +
Sbjct: 314 RAGRFEEACQYYRNMVERQNIVPDCILYTTMIKGYCEAGKINAALGFLREMTSKGLVPDT 373
Query: 524 ITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKS 345
Y ++ GLC A L + C PDS TY L+ G CK G ++EA +F+
Sbjct: 374 YCYNTLIKGLCDVGFLDKARSLRLEISKEDCFPDSTTYTILICGLCKEGLVNEAEEIFEE 433
Query: 344 FRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLIL 204
+ G + F+ +I+GL ++ + +A LF K+ ++G P L L
Sbjct: 434 MKRLGCSPTVMTFNSLINGLCKAGAVEKAHILFYKM-EMGSNPSLFL 479
Score = 37.7 bits (86), Expect(2) = 2e-20
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = -3
Query: 120 NGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKL 4
+GL+ +A ++ ++ K G P +T+N LI+GLCK G +
Sbjct: 504 SGLILKAYKLLKELVKSGAVPDIITYNILINGLCKAGNI 542
Score = 104 bits (259), Expect = 1e-19
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 14/284 (4%)
Frame = -1
Query: 929 MLLGGDSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKD-Y 753
ML G D + +L R E + N + L+ G +R + E+A + + M +
Sbjct: 273 MLSGFCKLGRVDEAFELLRSFRRENYMLGLNGYTTLLDGLFRAGRFEEACQYYRNMVERQ 332
Query: 752 NCKPNLAACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDA 573
N P+ M ++ LI GLC G A
Sbjct: 333 NIVPDCILYTTMIKGYCEAGKINAALGFLREMTSKGLVPDTYCYNTLIKGLCDVGFLDKA 392
Query: 572 LRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDG 393
L E+++ P S TYT+++ GLCK ++A ++F MK GC+P T+N+L++G
Sbjct: 393 RSLRLEISKEDCFPDSTTYTILICGLCKEGLVNEAEEIFEEMKRLGCSPTVMTFNSLING 452
Query: 392 FCKCGQIDEAFMLFKSFR-----------DDGFKVGIRGFSC--MIDGLIRSKRIGEAEK 252
CK G +++A +LF G + S M++ L S I +A K
Sbjct: 453 LCKAGAVEKAHILFYKMEMGSNPSLFLRLSQGSDPALDSASLQSMVERLCNSGLILKAYK 512
Query: 251 LFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG 120
L +++ G VPD+I Y+I+I GL ++ + A + +++ KG
Sbjct: 513 LLKELVKSGAVPDIITYNILINGLCKAGNINGAFKLLKELQLKG 556
Score = 99.8 bits (247), Expect = 2e-18
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 48/216 (22%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI GLCK G+ +A +F+EM G P+ +T+ +++GLCKA AH LF M
Sbjct: 410 TYTILICGLCKEGLVNEAEEIFEEMKRLGCSPTVMTFNSLINGLCKAGAVEKAHILFYKM 469
Query: 446 K------------------------------------------------NSGCTPDSATY 411
+ SG PD TY
Sbjct: 470 EMGSNPSLFLRLSQGSDPALDSASLQSMVERLCNSGLILKAYKLLKELVKSGAVPDIITY 529
Query: 410 NALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFD 231
N L++G CK G I+ AF L K + G+ ++ +IDGL R+ R EA L +
Sbjct: 530 NILINGLCKAGNINGAFKLLKELQLKGYSPDAVTYTTLIDGLQRADREEEAFSLLDLMVS 589
Query: 230 VGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGK 123
G +PD+++Y +++ L R+ A +++ + + K
Sbjct: 590 HGHMPDVVVYKVLMTSLCRKGRVTQAFSLWLNFLSK 625
Score = 80.9 bits (198), Expect = 1e-12
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T+++LI+GLCK+G A +L E+ +G P ++TYT ++ GL +A R +A L LM
Sbjct: 528 TYNILINGLCKAGNINGAFKLLKELQLKGYSPDAVTYTTLIDGLQRADREEEAFSLLDLM 587
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRI 267
+ G PD Y L+ C+ G++ +AF L+ +F F V + MI+ +
Sbjct: 588 VSHGHMPDVVVYKVLMTSLCRKGRVTQAFSLWLNFLSKRF-VTSEKEAGMIELVREHFEQ 646
Query: 266 GEAEKLFQKVFDVGL---VPDLILYSIMIRGLSESRRLEDATNMF 141
G+A + + + ++ L D Y+I + G + L+ A +F
Sbjct: 647 GKAGEAVRGLIEMDLKLKAVDSSPYTIWLIGFCKGGELDKALKIF 691
>gb|EXB51207.1| hypothetical protein L484_019198 [Morus notabilis]
Length = 759
Score = 254 bits (649), Expect(2) = 1e-68
Identities = 133/327 (40%), Positives = 195/327 (59%), Gaps = 6/327 (1%)
Frame = -1
Query: 1076 PFLNREIIVSVLKSQAQLKKD------LRISFRFFIWAAGKRRFRSGVLYSLMVDMLLGG 915
P L+ I+ SVL+ Q ++ ++ FRFF+WA RS +L + MLL
Sbjct: 10 PHLSPHIVTSVLRQHQQQRQHSDDTNTIQKRFRFFLWAWNSDFLRSKASETLFLQMLLKT 69
Query: 914 DSGNSFDLYWSVLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNL 735
+ ++F+ S L L++ ++ + ++AF I G+ EKA+E FGRM+D CKP++
Sbjct: 70 QNDDAFE---SALRHLKEHRIPIPSDAFRAAIKGFLGSGMPEKALEFFGRMRDLGCKPDV 126
Query: 734 AACNXXXXXXXXXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKSGMTQDALRLFDE 555
N +YN ML+SN TF++LI G CKSG QDA ++FDE
Sbjct: 127 FTYNVILCLMLRKQVFSLALALYNEMLESNCTPDLVTFNILIHGFCKSGQIQDAQKMFDE 186
Query: 554 MTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLMKNSGCTPDSATYNALLDGFCKCGQ 375
M ERG+ P TYT+I+SGLC+AKR +A +L M+ SGC PD+ YNALL+G+C+ G+
Sbjct: 187 MAERGLAPDERTYTIIISGLCQAKRVDEARRLLITMEESGCCPDTVAYNALLNGYCQLGR 246
Query: 374 IDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSI 195
IDEA+ + +G+ VG++G+SC+IDGL ++KR EA F+K+ G+ PD++ Y I
Sbjct: 247 IDEAYAFMRWSEKEGYVVGLKGYSCLIDGLFKAKRYVEAHGWFRKMIKAGVKPDVVFYGI 306
Query: 194 MIRGLSESRRLEDATNMFRDMIGKGTV 114
MIRGLS+ R+EDA NM M +G V
Sbjct: 307 MIRGLSDGGRVEDALNMLNGMSREGLV 333
Score = 34.3 bits (77), Expect(2) = 1e-68
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -3
Query: 117 GLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDG 10
GLL EA+ + ++ C P+A T+ LI G+C++G
Sbjct: 350 GLLDEARSLHLEISNRDCFPNACTYTILICGMCRNG 385
Score = 97.8 bits (242), Expect = 9e-18
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLF--- 456
T+++LI G+C++G+ ++A ++F+EM + G PS +T+ ++ GLCKA AH LF
Sbjct: 373 TYTILICGMCRNGLVKEAQQIFEEMDKVGCFPSVVTFNSLIHGLCKAGELGKAHLLFYRM 432
Query: 455 ----------SLMKNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGF 306
L + G D + A+++ C+ G + +A+ + D G +
Sbjct: 433 EIGRNPSLFLRLSQGGGRVLDGGSLQAVVEKLCESGLVLKAYRILTQLADSGVMPDTVTY 492
Query: 305 SCMIDGLIRSKRIGEAEKLFQKVFDVGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIG 126
+ +I+G ++ I A KLF+ + G PD + ++ +I GL + + EDA +F M+
Sbjct: 493 NSLINGFCKAGNINGALKLFKDMQLKGPSPDSVTHATLIDGLQRADKEEDAFAVFDQMVK 552
Query: 125 KGTVCWGRLNRFSMTWKS 72
G V + MTW S
Sbjct: 553 NGCVPSSSVYITLMTWSS 570
Score = 85.1 bits (209), Expect = 6e-14
Identities = 66/337 (19%), Positives = 122/337 (36%), Gaps = 83/337 (24%)
Frame = -1
Query: 881 VLDELRDEKVSVSANAFVVLILGYWRLRKAEKAVETFGRMKDYNCKPNLAACNXXXXXXX 702
+ DE+ + ++ + ++I G + ++ ++A M++ C P+ A N
Sbjct: 183 MFDEMAERGLAPDERTYTIIISGLCQAKRVDEARRLLITMEESGCCPDTVAYNALLNGYC 242
Query: 701 XXXXXXXXXXVYNMMLKSNYRVRCDTFSVLIDGLCKS----------------------- 591
K Y V +S LIDGL K+
Sbjct: 243 QLGRIDEAYAFMRWSEKEGYVVGLKGYSCLIDGLFKAKRYVEAHGWFRKMIKAGVKPDVV 302
Query: 590 ------------GMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
G +DAL + + M+ G++P + Y+ ++ G C +A L +
Sbjct: 303 FYGIMIRGLSDGGRVEDALNMLNGMSREGLVPDAYCYSAVIKGFCDVGLLDEARSLHLEI 362
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFRDDGFKVGIRGFSCMIDGLIRSKRI 267
N C P++ TY L+ G C+ G + EA +F+ G + F+ +I GL ++ +
Sbjct: 363 SNRDCFPNACTYTILICGMCRNGLVKEAQQIFEEMDKVGCFPSVVTFNSLIHGLCKAGEL 422
Query: 266 GEAEKLFQK------------------------------------------------VFD 231
G+A LF + + D
Sbjct: 423 GKAHLLFYRMEIGRNPSLFLRLSQGGGRVLDGGSLQAVVEKLCESGLVLKAYRILTQLAD 482
Query: 230 VGLVPDLILYSIMIRGLSESRRLEDATNMFRDMIGKG 120
G++PD + Y+ +I G ++ + A +F+DM KG
Sbjct: 483 SGVMPDTVTYNSLINGFCKAGNINGALKLFKDMQLKG 519
Score = 75.1 bits (183), Expect = 6e-11
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 36/198 (18%)
Frame = -1
Query: 626 TFSVLIDGLCKSGMTQDALRLFDEMTERGILPSSITYTVILSGLCKAKRTHDAHKLFSLM 447
T++ LI+G CK+G AL+LF +M +G P S+T+ ++ GL +A + DA +F M
Sbjct: 491 TYNSLINGFCKAGNINGALKLFKDMQLKGPSPDSVTHATLIDGLQRADKEEDAFAVFDQM 550
Query: 446 KNSGCTPDSATYNALLDGFCKCGQIDEAFMLFKSFR--------------DDGFKVG--- 318
+GC P S+ Y L+ + G+ AF L+ ++ ++ FK G
Sbjct: 551 VKNGCVPSSSVYITLMTWSSRRGKHSLAFSLWLKYQANLPGRDREEINAVEEDFKRGDLD 610
Query: 317 --IRG---------------FSCMIDGLIRSKRIGEAEKLFQ--KVFDVGLVPDLILYSI 195
IRG ++ ++ GL + R EA +F K ++V + P +
Sbjct: 611 KAIRGLLEMDFRLKDFDLAPYTVLLIGLCQGGRFDEALTMFSLLKEYNVSVPPSSCVN-- 668
Query: 194 MIRGLSESRRLEDATNMF 141
+I GL S +L+ ATN++
Sbjct: 669 LIYGLCGSGKLDLATNIY 686
Score = 62.4 bits (150), Expect = 4e-07
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -3
Query: 123 RNGLLGEAQQIFNDMEKLGCSPSAVTFNALIDGLCKDGKL 4
RNGL+ EAQQIF +M+K+GC PS VTFN+LI GLCK G+L
Sbjct: 383 RNGLVKEAQQIFEEMDKVGCFPSVVTFNSLIHGLCKAGEL 422