BLASTX nr result
ID: Rehmannia25_contig00023532
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00023532
(336 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004231213.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 79 5e-13
ref|XP_006339696.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 79 6e-13
ref|XP_006339695.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 79 6e-13
gb|EPS74101.1| hypothetical protein M569_00652, partial [Genlise... 79 8e-13
ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putativ... 70 2e-10
gb|EOX95733.1| P-loop containing nucleoside triphosphate hydrola... 69 6e-10
ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 64 2e-08
emb|CBI40505.3| unnamed protein product [Vitis vinifera] 64 2e-08
emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera] 64 2e-08
ref|XP_006491256.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 64 3e-08
ref|XP_006444867.1| hypothetical protein CICLE_v10018995mg [Citr... 64 3e-08
ref|XP_006837444.1| hypothetical protein AMTR_s00107p00082420 [A... 60 2e-07
ref|XP_002320859.2| hypothetical protein POPTR_0014s09330g [Popu... 59 5e-07
ref|XP_004154493.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 58 1e-06
ref|XP_006286450.1| hypothetical protein CARUB_v10000281mg [Caps... 56 4e-06
ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 56 4e-06
ref|XP_002302625.1| DEAD box RNA helicase family protein [Populu... 55 1e-05
>ref|XP_004231213.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like [Solanum
lycopersicum]
Length = 841
Score = 79.3 bits (194), Expect = 5e-13
Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 8/101 (7%)
Frame = -3
Query: 286 FSTRSGRERMGSGFRQDARAGSSKSLIDDEAELSDWVSGLKS-SSFNKTRLYSDSENDED 110
FS+RSGR R GSG D R SKSLI+DEAELSDWVSGL+S SSF KT++YS+S+++E
Sbjct: 66 FSSRSGRPRPGSG--ADVRV--SKSLIEDEAELSDWVSGLRSDSSFTKTQVYSESDDNEG 121
Query: 109 DTK--NGGFRSREGAG-----KRRKESEFNKESDVASRRGG 8
D + G F +R G KRR++ +F+ RRGG
Sbjct: 122 DRERGRGRFSNRRNGGEDRGEKRRRDDDFSG----PGRRGG 158
>ref|XP_006339696.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like isoform X2
[Solanum tuberosum]
Length = 869
Score = 79.0 bits (193), Expect = 6e-13
Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 8/101 (7%)
Frame = -3
Query: 286 FSTRSGRERMGSGFRQDARAGSSKSLIDDEAELSDWVSGLKS-SSFNKTRLYSDSENDED 110
FS+RSGR R GSG D R SKSLI+DEAELSDWVSGL+S SSF KT++YS+S+++E
Sbjct: 66 FSSRSGRPRPGSG--ADVRV--SKSLIEDEAELSDWVSGLRSDSSFTKTQVYSESDDNEG 121
Query: 109 DTK--NGGFRSREGAG-----KRRKESEFNKESDVASRRGG 8
D + G F +R G KRR++ +F+ RRGG
Sbjct: 122 DRERSRGKFGNRRNGGEDRGEKRRRDDDFSG----PGRRGG 158
>ref|XP_006339695.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 26-like isoform X1
[Solanum tuberosum]
Length = 894
Score = 79.0 bits (193), Expect = 6e-13
Identities = 52/101 (51%), Positives = 67/101 (66%), Gaps = 8/101 (7%)
Frame = -3
Query: 286 FSTRSGRERMGSGFRQDARAGSSKSLIDDEAELSDWVSGLKS-SSFNKTRLYSDSENDED 110
FS+RSGR R GSG D R SKSLI+DEAELSDWVSGL+S SSF KT++YS+S+++E
Sbjct: 66 FSSRSGRPRPGSG--ADVRV--SKSLIEDEAELSDWVSGLRSDSSFTKTQVYSESDDNEG 121
Query: 109 DTK--NGGFRSREGAG-----KRRKESEFNKESDVASRRGG 8
D + G F +R G KRR++ +F+ RRGG
Sbjct: 122 DRERSRGKFGNRRNGGEDRGEKRRRDDDFSG----PGRRGG 158
>gb|EPS74101.1| hypothetical protein M569_00652, partial [Genlisea aurea]
Length = 660
Score = 78.6 bits (192), Expect = 8e-13
Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 19/92 (20%)
Frame = -3
Query: 223 SSKSLIDDEAELSDWVSGLKSSSFNKTRLYSDSENDEDDTK-NGGFRSREGAGKRRKE-- 53
SSKSLI+DEAELSDWVSGL S F +RLYS SE+D D + GGFR RE AGK R+E
Sbjct: 4 SSKSLIEDEAELSDWVSGLSSGGFKNSRLYSGSESDAADGRGGGGFRKRESAGKPRREGF 63
Query: 52 ----------------SEFNKESDVASRRGGE 5
+ NK+S V+ RRG +
Sbjct: 64 DSSRNKKRGANQTVFSEDRNKKSAVSGRRGND 95
>ref|XP_002523364.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223537452|gb|EEF39080.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 751
Score = 70.5 bits (171), Expect = 2e-10
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Frame = -3
Query: 286 FSTRSGRERMGSGFRQDARAGSSKSLIDDEAELSDWVSGLKSSSFNKTRLYSDSENDEDD 107
FSTRS R R + R + SKSLI+DEAELSDWVS LK+SS + +L S+ E+D D
Sbjct: 65 FSTRSFRPRTTA--RSSSEFRQSKSLIEDEAELSDWVSELKTSSL-RGKLTSEDESDSDM 121
Query: 106 TKNGG--FRSREG--AGKRRKESEFNKESDVASRRG 11
T+N R REG + KRR+E E ++ S++ +RRG
Sbjct: 122 TRNKSKRERGREGFSSSKRRRERETDEFSELNNRRG 157
>gb|EOX95733.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein [Theobroma cacao]
Length = 793
Score = 68.9 bits (167), Expect = 6e-10
Identities = 50/107 (46%), Positives = 64/107 (59%), Gaps = 11/107 (10%)
Frame = -3
Query: 289 SFSTRSGRERMGSGF---RQD-ARAGSSKSLIDDEAELSDWVSGLKSSSFNKTRLYSDSE 122
S STRS R R GS R+D G+SKSLI+DEAELSDWV L++ SF + RL S+ E
Sbjct: 64 SLSTRSFRTRPGSSSEFTRKDRGDVGASKSLIEDEAELSDWVGELRTDSF-RGRLTSEDE 122
Query: 121 NDEDDTKNGGFRSRE-----GAGKRRKESEFN--KESDVASRRGGEG 2
+ D RSR+ G+ KRR+ESEF+ +ES+ RG G
Sbjct: 123 ELDADRARNRVRSRDREGNRGSVKRRRESEFDNFRESNRRGTRGNPG 169
>ref|XP_002277120.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Vitis
vinifera]
Length = 751
Score = 63.9 bits (154), Expect = 2e-08
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = -3
Query: 283 STRSGRERMGS--GFRQDARAGSSKSLIDDEAELSDWVSGLKSSSFNKTRLYSDSENDED 110
STRS R R S GFR + + SKSL++DEAELSDWVSGLK SF +TR +D+
Sbjct: 66 STRSSRPRPSSTSGFRGEVKV--SKSLMEDEAELSDWVSGLKDDSF-RTRF----NDDDS 118
Query: 109 DTKNGGFRSREGAGKRRKESEFNKESDVASRRG 11
+ + G RS + KR +E E ++ D RRG
Sbjct: 119 EGERGTGRSGRDSMKRTREIESDEFGDFNRRRG 151
>emb|CBI40505.3| unnamed protein product [Vitis vinifera]
Length = 732
Score = 63.9 bits (154), Expect = 2e-08
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = -3
Query: 283 STRSGRERMGS--GFRQDARAGSSKSLIDDEAELSDWVSGLKSSSFNKTRLYSDSENDED 110
STRS R R S GFR + + SKSL++DEAELSDWVSGLK SF +TR +D+
Sbjct: 66 STRSSRPRPSSTSGFRGEVKV--SKSLMEDEAELSDWVSGLKDDSF-RTRF----NDDDS 118
Query: 109 DTKNGGFRSREGAGKRRKESEFNKESDVASRRG 11
+ + G RS + KR +E E ++ D RRG
Sbjct: 119 EGERGTGRSGRDSMKRTREIESDEFGDFNRRRG 151
>emb|CAN67649.1| hypothetical protein VITISV_005080 [Vitis vinifera]
Length = 863
Score = 63.9 bits (154), Expect = 2e-08
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = -3
Query: 283 STRSGRERMGS--GFRQDARAGSSKSLIDDEAELSDWVSGLKSSSFNKTRLYSDSENDED 110
STRS R R S GFR + + SKSL++DEAELSDWVSGLK SF +TR +D+
Sbjct: 66 STRSSRPRPSSTSGFRGEVKV--SKSLMEDEAELSDWVSGLKDDSF-RTRF----NDDDS 118
Query: 109 DTKNGGFRSREGAGKRRKESEFNKESDVASRRG 11
+ + G RS + KR +E E ++ D RRG
Sbjct: 119 EGERGTGRSGRDSMKRTREIESDEFGDFNRRRG 151
>ref|XP_006491256.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Citrus
sinensis]
Length = 747
Score = 63.5 bits (153), Expect = 3e-08
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Frame = -3
Query: 283 STRSGRERMGSGF-RQDARAGS---SKSLIDDEAELSDWVSGLKSSSFNKTRLYSDSEND 116
STR R S F R+ +RAG SK+LIDDEAELSDWVS L++ SF+ + +S ++
Sbjct: 73 STRPFRPAASSEFGRRGSRAGEIRGSKNLIDDEAELSDWVSDLRTDSFHSNKRFSKDDDV 132
Query: 115 EDDTKNGGFRSREGAGKRRKESEFNKESDVASRRG 11
D K G +R +R+ + +S +SRRG
Sbjct: 133 SDFRKGSGRENRGSYSMKRRRKSDSDDSYDSSRRG 167
>ref|XP_006444867.1| hypothetical protein CICLE_v10018995mg [Citrus clementina]
gi|557547129|gb|ESR58107.1| hypothetical protein
CICLE_v10018995mg [Citrus clementina]
Length = 746
Score = 63.5 bits (153), Expect = 3e-08
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Frame = -3
Query: 283 STRSGRERMGSGF-RQDARAGS---SKSLIDDEAELSDWVSGLKSSSFNKTRLYSDSEND 116
STR R S F R+ +RAG SK+LIDDEAELSDWVS L++ SF+ + +S ++
Sbjct: 72 STRPFRPAASSEFGRRGSRAGEIRGSKNLIDDEAELSDWVSDLRTDSFHSNKRFSKDDDV 131
Query: 115 EDDTKNGGFRSREGAGKRRKESEFNKESDVASRRG 11
D K G +R +R+ + +S +SRRG
Sbjct: 132 SDFRKGSGRENRGSYSMKRRRKSDSDDSYDSSRRG 166
>ref|XP_006837444.1| hypothetical protein AMTR_s00107p00082420 [Amborella trichopoda]
gi|548840085|gb|ERN00298.1| hypothetical protein
AMTR_s00107p00082420 [Amborella trichopoda]
Length = 848
Score = 60.5 bits (145), Expect = 2e-07
Identities = 45/110 (40%), Positives = 55/110 (50%), Gaps = 24/110 (21%)
Frame = -3
Query: 286 FSTRSGRERMG-------------SGFRQDARAGSSKSLIDDEAELSDWVSGLKSSSFNK 146
FSTRS RER SGFR A+ G SKSL++DEAELSDW+S LK+ S
Sbjct: 78 FSTRSSRERPSCFSRGPTASIHRDSGFRS-AKLGQSKSLVEDEAELSDWISDLKTDSLKL 136
Query: 145 TRLYSDSENDED-DTKNGGFRSREGAGKRRK----------ESEFNKESD 29
SDS+ D KN S +G KR+K F+K+SD
Sbjct: 137 GLSDSDSDMDSSFSKKNHRDSSDDGLKKRQKNGNLGNGVFSRKRFDKDSD 186
>ref|XP_002320859.2| hypothetical protein POPTR_0014s09330g [Populus trichocarpa]
gi|550323824|gb|EEE99174.2| hypothetical protein
POPTR_0014s09330g [Populus trichocarpa]
Length = 760
Score = 59.3 bits (142), Expect = 5e-07
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Frame = -3
Query: 304 PFVTSSFSTRSGRE----------RMGSGFRQDARAGSSKSLIDDEAELSDWVSGLKSSS 155
P +S FSTRS R R R+ A +SKSL++DEAELSDWVS L+++S
Sbjct: 50 PGFSSRFSTRSFRPGTTGSRPEFTRRTGAERERGEARTSKSLVEDEAELSDWVSDLRTNS 109
Query: 154 FNKTRLYSDSENDEDDTKNGGFRSREGAGKRRKESEFNKESDVASRRGG 8
F + R+ S+ E+D D + RS+ G G+ R D S RGG
Sbjct: 110 F-RGRVTSEDESDSDMGRRN--RSKRGPGRDR---------DSGSNRGG 146
>ref|XP_004154493.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
31-like [Cucumis sativus]
Length = 842
Score = 58.2 bits (139), Expect = 1e-06
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Frame = -3
Query: 301 FVTSSFSTRS-----GRERMGSGFRQDARAG--SSKSLIDDEAELSDWVSGLKSSSFNKT 143
+ + +FS+RS G R + R R G SKSL++DEAELSDWVS LK+SSF +
Sbjct: 49 YASMAFSSRSSQAFQGVRRSSAVGRNSERGGFGGSKSLVEDEAELSDWVSDLKTSSF-RG 107
Query: 142 RLYSDSENDEDDTKNGGFRSRE--------GAGKRRKESEFNKESDVASRRG 11
R+ SD ++D D G R R+ G+ R+ E + S+ RG
Sbjct: 108 RITSDEDSDGDRGSRGRDRDRDRDRESPSLKRGRDRQSYELRESSERRRPRG 159
>ref|XP_006286450.1| hypothetical protein CARUB_v10000281mg [Capsella rubella]
gi|482555156|gb|EOA19348.1| hypothetical protein
CARUB_v10000281mg [Capsella rubella]
Length = 766
Score = 56.2 bits (134), Expect = 4e-06
Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Frame = -3
Query: 289 SFSTRSGRERMGSGFRQDA--RAGSSKSLIDDEAELSDWVSGLKSSSFNKTRLYSDSEND 116
SFSTR R + G R+ A +SKSLI+DEAELSDWVS L++SS ++ + SD +N
Sbjct: 57 SFSTRPERSQAEFGRRRGAGGEIRASKSLIEDEAELSDWVSDLRTSS-SRGKFTSDEDNS 115
Query: 115 ---------EDDTKNGGFRSREGAGKRRKESEFNKESDVASRRGG 8
+ D+ G R REG R + KE ++ R GG
Sbjct: 116 GPEVVRRTVDRDSNRGPRRGREGQSDRFGGARRGKEGEM-DRFGG 159
>ref|XP_004139737.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
26-like [Cucumis sativus]
Length = 841
Score = 56.2 bits (134), Expect = 4e-06
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 14/111 (12%)
Frame = -3
Query: 301 FVTSSFSTRS-----GRERMGSGFRQDARAG--SSKSLIDDEAELSDWVSGLKSSSFNKT 143
+ + +FS+RS G R + R R G SKSL++DEAELSDWVS LK+SSF +
Sbjct: 49 YASMAFSSRSSQAFQGVRRSSAVGRNSERGGFGGSKSLVEDEAELSDWVSDLKTSSF-RG 107
Query: 142 RLYSDSENDEDDTKNGG---FRSREG----AGKRRKESEFNKESDVASRRG 11
R+ SD ++D D + G R RE G+ R+ E + S+ RG
Sbjct: 108 RITSDEDSDGDRRGSRGRDRDRDRESPSLKRGRDRQSYELRESSERRRPRG 158
>ref|XP_002302625.1| DEAD box RNA helicase family protein [Populus trichocarpa]
gi|222844351|gb|EEE81898.1| DEAD box RNA helicase family
protein [Populus trichocarpa]
Length = 758
Score = 55.1 bits (131), Expect = 1e-05
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 26/119 (21%)
Frame = -3
Query: 292 SSFSTRSGR----------ERMGSGFRQDARAGSSKSLIDDEAELSDWVSGLKSSSFNKT 143
S FSTRS R R+ G + + SKSLI+DEAELSDWVS L+++S +
Sbjct: 54 SQFSTRSFRPEPIRSRPEFSRLTGGGVERGESRPSKSLIEDEAELSDWVSDLRTNSI-RG 112
Query: 142 RLYSDSENDED-------------DTKNGGFRSREGAG---KRRKESEFNKESDVASRR 14
++ S+ E D D +T +GG + G KRR+ES N+ S+ RR
Sbjct: 113 QVTSEDEPDSDMGRRSRSKTGRARETDSGGNKGGGAGGFSMKRRRESNSNEFSEPTRRR 171