BLASTX nr result
ID: Rehmannia25_contig00023406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00023406
(443 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containi... 105 6e-21
ref|XP_006428089.1| hypothetical protein CICLE_v10027512mg [Citr... 104 1e-20
ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
emb|CBI21484.3| unnamed protein product [Vitis vinifera] 103 2e-20
ref|XP_004237612.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
gb|EXB80846.1| hypothetical protein L484_020104 [Morus notabilis] 99 8e-19
gb|ESW15249.1| hypothetical protein PHAVU_007G057100g [Phaseolus... 97 2e-18
gb|EPS61204.1| hypothetical protein M569_13595 [Genlisea aurea] 96 5e-18
ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containi... 96 6e-18
ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
ref|XP_002310592.2| pentatricopeptide repeat-containing family p... 90 3e-16
ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutr... 89 8e-16
ref|XP_004496732.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|EOX92237.1| Pentatricopeptide (PPR) repeat-containing protein... 86 7e-15
ref|XP_006827023.1| hypothetical protein AMTR_s00010p00221030 [A... 82 6e-14
ref|XP_002878586.1| pentatricopeptide repeat-containing protein ... 81 2e-13
ref|NP_179798.1| pentatricopeptide repeat-containing protein [Ar... 80 2e-13
ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Caps... 79 5e-13
>ref|XP_006354721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Solanum tuberosum]
Length = 786
Score = 105 bits (262), Expect = 6e-21
Identities = 53/88 (60%), Positives = 66/88 (75%)
Frame = +1
Query: 178 QNPPPRRSQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEF 357
QN SQ Y S+LQ SLK+++PF I+ IH RIIKSG+ L VF+MNN++N YAKT F
Sbjct: 4 QNSQSFVSQSHFYVSLLQDSLKSKDPFPIKLIHGRIIKSGIHLSVFLMNNLINGYAKTGF 63
Query: 358 ISDARHVFDEMPVRNVSSYNTLLSAYAK 441
+S AR VFD MPVR+ SS+NTLLS Y+K
Sbjct: 64 LSYARKVFDVMPVRDTSSWNTLLSGYSK 91
>ref|XP_006428089.1| hypothetical protein CICLE_v10027512mg [Citrus clementina]
gi|568819548|ref|XP_006464311.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like [Citrus sinensis]
gi|557530079|gb|ESR41329.1| hypothetical protein
CICLE_v10027512mg [Citrus clementina]
Length = 785
Score = 104 bits (260), Expect = 1e-20
Identities = 51/87 (58%), Positives = 67/87 (77%)
Frame = +1
Query: 181 NPPPRRSQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFI 360
NPP S ++ YA +LQ++LK+RNPF + +H RIIK GL L VF+ N++MN YAKTE I
Sbjct: 5 NPPSLISPLEFYAHLLQSNLKSRNPFVGKLVHVRIIKCGLHLSVFLKNSLMNFYAKTESI 64
Query: 361 SDARHVFDEMPVRNVSSYNTLLSAYAK 441
S A+ VFDEMPV+ + S+NT+LSAYAK
Sbjct: 65 SYAKKVFDEMPVKTLCSWNTILSAYAK 91
>ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 103 bits (258), Expect = 2e-20
Identities = 52/81 (64%), Positives = 63/81 (77%)
Frame = +1
Query: 199 SQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFISDARHV 378
S D Y S LQ SLK ++PF+ + IHARIIK+GL LGVF+MNN+MN YAKT FI DA V
Sbjct: 11 SPSDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRV 70
Query: 379 FDEMPVRNVSSYNTLLSAYAK 441
FDEMPV++V S+N +LS YAK
Sbjct: 71 FDEMPVKSVFSWNIILSGYAK 91
>emb|CBI21484.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 103 bits (258), Expect = 2e-20
Identities = 52/81 (64%), Positives = 63/81 (77%)
Frame = +1
Query: 199 SQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFISDARHV 378
S D Y S LQ SLK ++PF+ + IHARIIK+GL LGVF+MNN+MN YAKT FI DA V
Sbjct: 11 SPSDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRV 70
Query: 379 FDEMPVRNVSSYNTLLSAYAK 441
FDEMPV++V S+N +LS YAK
Sbjct: 71 FDEMPVKSVFSWNIILSGYAK 91
>ref|XP_004237612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Solanum lycopersicum]
Length = 786
Score = 103 bits (256), Expect = 3e-20
Identities = 53/88 (60%), Positives = 64/88 (72%)
Frame = +1
Query: 178 QNPPPRRSQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEF 357
QN SQ Y S LQ SLK++ PF I+ IH RIIKSG+ L VF+MNN++N YAKT F
Sbjct: 4 QNSQSFASQSHFYVSFLQDSLKSKVPFPIKLIHGRIIKSGIHLSVFLMNNLINGYAKTGF 63
Query: 358 ISDARHVFDEMPVRNVSSYNTLLSAYAK 441
+S AR VFD MPVR+ SS+NTLLS Y+K
Sbjct: 64 LSYARKVFDVMPVRDSSSWNTLLSGYSK 91
>gb|EXB80846.1| hypothetical protein L484_020104 [Morus notabilis]
Length = 799
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/87 (55%), Positives = 63/87 (72%)
Frame = +1
Query: 181 NPPPRRSQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFI 360
NP + YA LQT LK R+PF+ + IHA+IIKSG+ + VF+MNN+MN YAK+ +
Sbjct: 5 NPSFNAFSSEFYAYHLQTRLKLRDPFAGKSIHAQIIKSGIYMSVFLMNNLMNFYAKSRSV 64
Query: 361 SDARHVFDEMPVRNVSSYNTLLSAYAK 441
SDA +FDEMPVR S+NT+L+AYAK
Sbjct: 65 SDAHRLFDEMPVRTTFSWNTILTAYAK 91
>gb|ESW15249.1| hypothetical protein PHAVU_007G057100g [Phaseolus vulgaris]
Length = 786
Score = 97.1 bits (240), Expect = 2e-18
Identities = 50/91 (54%), Positives = 67/91 (73%)
Frame = +1
Query: 169 IIMQNPPPRRSQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAK 348
++MQNP P S D + +LQ+++K+R+PF R IHA IIK GL LGVF+MNN++N YAK
Sbjct: 3 VLMQNPNPP-SPSDKWPFLLQSAIKSRDPFLGRCIHAPIIKHGLCLGVFLMNNLLNFYAK 61
Query: 349 TEFISDARHVFDEMPVRNVSSYNTLLSAYAK 441
T SDA VFDEMP++ S+NT+LS +AK
Sbjct: 62 TGSFSDAHRVFDEMPLKTTFSWNTILSMHAK 92
>gb|EPS61204.1| hypothetical protein M569_13595 [Genlisea aurea]
Length = 811
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/69 (65%), Positives = 57/69 (82%)
Frame = +1
Query: 235 SLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFISDARHVFDEMPVRNVSSY 414
S+K +NPF IRP H +IKSGLQ VF+MNN++NAYAK+ I DAR +FD MPV+++SSY
Sbjct: 47 SIKAKNPFVIRPAHTFVIKSGLQGVVFLMNNLVNAYAKSGSICDARELFDHMPVKDISSY 106
Query: 415 NTLLSAYAK 441
NT+LSAYAK
Sbjct: 107 NTILSAYAK 115
>ref|XP_004306202.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Fragaria vesca subsp. vesca]
Length = 1013
Score = 95.5 bits (236), Expect = 6e-18
Identities = 47/78 (60%), Positives = 58/78 (74%)
Frame = +1
Query: 208 DLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFISDARHVFDE 387
D YA +LQ L R+PF+ + IHA+IIKSGL LGVF+MNN++N Y KT DA HVFDE
Sbjct: 242 DSYALLLQACLNKRHPFAGKTIHAQIIKSGLHLGVFLMNNLINYYIKTGSYVDAHHVFDE 301
Query: 388 MPVRNVSSYNTLLSAYAK 441
MP+RN S+NT+LS Y K
Sbjct: 302 MPLRNRFSWNTILSNYTK 319
>ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/78 (53%), Positives = 60/78 (76%)
Frame = +1
Query: 208 DLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFISDARHVFDE 387
+ +A ILQTS++ ++PF+ R +H +IIK GL LGV++MNN+M YAKT + A HVFDE
Sbjct: 11 EFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDE 70
Query: 388 MPVRNVSSYNTLLSAYAK 441
MP+++ S+NTL+S YAK
Sbjct: 71 MPLKSTFSWNTLISGYAK 88
>ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 92.8 bits (229), Expect = 4e-17
Identities = 42/78 (53%), Positives = 60/78 (76%)
Frame = +1
Query: 208 DLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFISDARHVFDE 387
+ +A ILQTS++ ++PF+ R +H +IIK GL LGV++MNN+M YAKT + A HVFDE
Sbjct: 11 EFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDE 70
Query: 388 MPVRNVSSYNTLLSAYAK 441
MP+++ S+NTL+S YAK
Sbjct: 71 MPLKSTFSWNTLISGYAK 88
>ref|XP_002310592.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550334248|gb|EEE91042.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 785
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/87 (50%), Positives = 60/87 (68%)
Frame = +1
Query: 181 NPPPRRSQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFI 360
NPP + A +LQTSLK+R+P + IHA+++K GL V++MNN+MN YAKT F
Sbjct: 5 NPPYFSCHSESCAHLLQTSLKSRDPLKGKSIHAQMVKLGLTFSVYLMNNLMNLYAKTGFH 64
Query: 361 SDARHVFDEMPVRNVSSYNTLLSAYAK 441
DA +F+EMPV+ S+NT+LS YAK
Sbjct: 65 LDAHDLFNEMPVKTTFSWNTILSGYAK 91
>ref|XP_006404655.1| hypothetical protein EUTSA_v10000053mg [Eutrema salsugineum]
gi|557105783|gb|ESQ46108.1| hypothetical protein
EUTSA_v10000053mg [Eutrema salsugineum]
Length = 785
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/91 (48%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Frame = +1
Query: 175 MQNPPPRRSQ--VDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAK 348
M P P S ++L ++LQ SL + F+ + +H R+IKSGL L V++MNN+MN Y+K
Sbjct: 1 MDAPIPHSSHTLLELCTNLLQKSLNSNGRFTAQLVHCRVIKSGLMLSVYLMNNLMNVYSK 60
Query: 349 TEFISDARHVFDEMPVRNVSSYNTLLSAYAK 441
T + AR +FDEMP+R S+NT+LSAYAK
Sbjct: 61 TGYAFHARKLFDEMPLRTTFSWNTVLSAYAK 91
>ref|XP_004496732.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cicer arietinum]
Length = 782
Score = 88.6 bits (218), Expect = 8e-16
Identities = 44/89 (49%), Positives = 63/89 (70%)
Frame = +1
Query: 175 MQNPPPRRSQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTE 354
M+ P P D Y +LQ+++K+R+ F+ R IHARIIK GL VF+MNN++N Y+KT
Sbjct: 1 METPKPHFHS-DAYVHLLQSAIKSRDSFTGRFIHARIIKHGLHFTVFLMNNLLNFYSKTG 59
Query: 355 FISDARHVFDEMPVRNVSSYNTLLSAYAK 441
++A VF+EMP++ S+NT+LSAYAK
Sbjct: 60 SFTEAHRVFNEMPLKTTFSWNTVLSAYAK 88
>ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like isoform X1 [Glycine max]
gi|571439750|ref|XP_006574948.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g22070-like isoform X2 [Glycine max]
Length = 785
Score = 88.2 bits (217), Expect = 1e-15
Identities = 47/88 (53%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +1
Query: 181 NPPPRRSQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQ-LGVFMMNNVMNAYAKTEF 357
NPP S D +LQ+++K+R+PF R IHARIIK GL+ LGVF+ NN++N Y KT
Sbjct: 7 NPP---SHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGS 63
Query: 358 ISDARHVFDEMPVRNVSSYNTLLSAYAK 441
SDA +FDEMP++ S+NT+LSA+AK
Sbjct: 64 SSDAHRLFDEMPLKTTFSWNTILSAHAK 91
>gb|EOX92237.1| Pentatricopeptide (PPR) repeat-containing protein [Theobroma cacao]
Length = 782
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/75 (53%), Positives = 58/75 (77%)
Frame = +1
Query: 217 ASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFISDARHVFDEMPV 396
A +LQ SL++++ + + IHARIIK+GL VF++NN+MN Y+KT DA+ +FDEMPV
Sbjct: 14 ACLLQESLRSKDLLAGKSIHARIIKAGLHFSVFLLNNLMNVYSKTGSFYDAQSLFDEMPV 73
Query: 397 RNVSSYNTLLSAYAK 441
+ + S+NTLLSAY+K
Sbjct: 74 KTIFSWNTLLSAYSK 88
>ref|XP_006827023.1| hypothetical protein AMTR_s00010p00221030 [Amborella trichopoda]
gi|548831452|gb|ERM94260.1| hypothetical protein
AMTR_s00010p00221030 [Amborella trichopoda]
Length = 645
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/89 (47%), Positives = 58/89 (65%)
Frame = +1
Query: 175 MQNPPPRRSQVDLYASILQTSLKTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTE 354
M N P VD YAS+L + L+TRNP S + IHA I K GL F+ N ++N Y+K
Sbjct: 1 MVNSNPFSPLVDHYASLLHSCLRTRNPTSPKSIHAHITKHGLHASAFLTNLLINLYSKCG 60
Query: 355 FISDARHVFDEMPVRNVSSYNTLLSAYAK 441
+S ++ +FDEM +N SS+NT++SAYAK
Sbjct: 61 SLSSSQKLFDEMLQKNTSSWNTIISAYAK 89
>ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324425|gb|EFH54845.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 786
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/80 (48%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +1
Query: 205 VDLYASILQTSL-KTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFISDARHVF 381
++L ++LQ S+ K+ F+ + +H R+IKSGL V++MNN+MN Y+KT + AR +F
Sbjct: 13 LELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLF 72
Query: 382 DEMPVRNVSSYNTLLSAYAK 441
DEMP+R S+NT+LSAYAK
Sbjct: 73 DEMPLRTAFSWNTVLSAYAK 92
>ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g22070 gi|4587589|gb|AAD25817.1| hypothetical protein
[Arabidopsis thaliana] gi|330252165|gb|AEC07259.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 786
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/80 (47%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +1
Query: 205 VDLYASILQTSL-KTRNPFSIRPIHARIIKSGLQLGVFMMNNVMNAYAKTEFISDARHVF 381
++L ++LQ S+ K+ F+ + +H R+IKSGL V++MNN+MN Y+KT + AR +F
Sbjct: 13 LELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLF 72
Query: 382 DEMPVRNVSSYNTLLSAYAK 441
DEMP+R S+NT+LSAY+K
Sbjct: 73 DEMPLRTAFSWNTVLSAYSK 92
>ref|XP_006296049.1| hypothetical protein CARUB_v10025197mg [Capsella rubella]
gi|482564757|gb|EOA28947.1| hypothetical protein
CARUB_v10025197mg [Capsella rubella]
Length = 795
Score = 79.3 bits (194), Expect = 5e-13
Identities = 41/101 (40%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = +1
Query: 142 LILIAYSSQIIMQNPPPRRSQVDLYASILQTSL-KTRNPFSIRPIHARIIKSGLQLGVFM 318
+ +I Y+ + P + ++L ++LQ S+ K+ F+ + +H R+IKSGL V++
Sbjct: 1 MFVIIYTVPMNSPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLFFSVYL 60
Query: 319 MNNVMNAYAKTEFISDARHVFDEMPVRNVSSYNTLLSAYAK 441
MNN+MN Y+KT + AR +FDEMP+R S+N +LSAYAK
Sbjct: 61 MNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNIVLSAYAK 101