BLASTX nr result

ID: Rehmannia25_contig00023342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00023342
         (526 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347892.1| PREDICTED: vesicle-associated protein 1-3-li...    64   2e-08
ref|XP_004229791.1| PREDICTED: vesicle-associated protein 1-3-li...    64   2e-08

>ref|XP_006347892.1| PREDICTED: vesicle-associated protein 1-3-like [Solanum tuberosum]
          Length = 240

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   SPVPEGDEEGTSPGTSSAEEEIRKSALSE-VAXXXXXXXXXXXXXXXXXXXXXXTEEKAS 177
           SPVPEG EEG SP TS  E++ + ++L E V+                      T+EKAS
Sbjct: 132 SPVPEGSEEGGSPRTSLTEDDSKSTSLPEAVSRSLEESKAKSSPSEAWSLISRLTDEKAS 191

Query: 178 VVKQNQKLLGELELIRKQTRQGQGGGVS 261
            ++QNQKL  ELEL+RK+  +   GGVS
Sbjct: 192 ALQQNQKLRQELELVRKEINKSNAGGVS 219


>ref|XP_004229791.1| PREDICTED: vesicle-associated protein 1-3-like [Solanum
           lycopersicum]
          Length = 240

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   SPVPEGDEEGTSPGTSSAEEEIRKSALSE-VAXXXXXXXXXXXXXXXXXXXXXXTEEKAS 177
           SPVPEG EEG SP TS  E++ + ++L E V+                      T+EKAS
Sbjct: 132 SPVPEGSEEGGSPRTSLTEDDSKSTSLPEAVSRSLEESKAKSSPSEAWSLISRLTDEKAS 191

Query: 178 VVKQNQKLLGELELIRKQTRQGQGGGVS 261
            ++QNQKL  ELEL+RK+  +   GGVS
Sbjct: 192 ALQQNQKLRQELELVRKEINKSNAGGVS 219


Top