BLASTX nr result

ID: Rehmannia25_contig00023241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00023241
         (403 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006373872.1| hypothetical protein POPTR_0016s08835g [Popu...    62   8e-08
gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao]     60   3e-07
gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao]     56   6e-06

>ref|XP_006373872.1| hypothetical protein POPTR_0016s08835g [Populus trichocarpa]
           gi|550321141|gb|ERP51669.1| hypothetical protein
           POPTR_0016s08835g [Populus trichocarpa]
          Length = 109

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 5/64 (7%)
 Frame = +1

Query: 76  KKKRKLVGFRKQVNKKD----KSEDCCHHCGKKGHWKRNCYEYLASLKKDKVSQG-VSGE 240
           KK++K  G   QVNK      K +  CHHCGK+GHW+RNC EYLA++K  K+++   SG 
Sbjct: 44  KKEKKNKGVVSQVNKPTRGIKKHKGICHHCGKEGHWRRNCKEYLATMKAKKLNETYTSGT 103

Query: 241 QKIV 252
           +K V
Sbjct: 104 KKKV 107


>gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 277

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 23/33 (69%), Positives = 26/33 (78%)
 Frame = +1

Query: 118 KKDKSEDCCHHCGKKGHWKRNCYEYLASLKKDK 216
           KKDK  D CHHCGK GHW+RNC EYLA++ K K
Sbjct: 230 KKDKETDICHHCGKLGHWRRNCKEYLATVSKKK 262


>gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 289

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = +1

Query: 118 KKDKSEDCCHHCGKKGHWKRNCYEYLASLKKDK 216
           KKDK +D C HCGK GHW+RNC EYL ++ K K
Sbjct: 242 KKDKEKDICDHCGKLGHWRRNCKEYLVTVSKKK 274


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