BLASTX nr result
ID: Rehmannia25_contig00023127
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00023127
(596 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao] 216 5e-54
emb|CAA73042.1| polyprotein [Ananas comosus] 213 4e-53
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom... 211 9e-53
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 211 2e-52
emb|CAJ65807.1| polyprotein [Citrus sinensis] 208 8e-52
gb|ADB85273.1| putative retrotransposon protein [Phyllostachys e... 208 8e-52
ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera] 208 1e-51
emb|CAE05830.1| OSJNBa0028M15.22 [Oryza sativa Japonica Group] 204 1e-50
gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobrom... 203 2e-50
gb|AAT85771.1| hypothetical protein [Oryza sativa Japonica Group... 201 9e-50
gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobrom... 201 1e-49
gb|ABB47100.1| retrotransposon protein, putative, Ty3-gypsy subc... 201 1e-49
gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Jap... 201 1e-49
gb|AAM74399.1|AC119149_14 Putative retroelement [Oryza sativa Ja... 201 1e-49
gb|AAK51585.1|AC022352_21 Putative retroelement [Oryza sativa Ja... 201 1e-49
gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao] 200 2e-49
gb|AAK51574.1|AC022352_10 Putative retroelement [Oryza sativa Ja... 200 2e-49
gb|AAQ56540.1| putative gag-pol polyprotein [Oryza sativa Japoni... 200 2e-49
gb|EOY21478.1| DNA/RNA polymerases superfamily protein [Theobrom... 200 3e-49
gb|EOY20325.1| Retrotransposon protein, Ty3-gypsy subclass, puta... 200 3e-49
>gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao]
Length = 809
Score = 216 bits (549), Expect = 5e-54
Identities = 104/202 (51%), Positives = 140/202 (69%), Gaps = 4/202 (1%)
Frame = +2
Query: 2 DALSRKAS--LARLMIREWKSLEELSNWNLTRTNTQISC--ANISVKPDLLKEIKEAQET 169
DALSRK+S LA L + L E+ + + N + A+ V+P LL +I+E Q++
Sbjct: 501 DALSRKSSSSLATLQSSYFSMLLEMKSLGIQLNNGEDGTLLASFVVRPSLLNQIRELQKS 560
Query: 170 DVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGG 349
D L++ +K+ GE EF + ++GI R+++ VP D+Q+R IL EAH S Y +HPG
Sbjct: 561 DDWLKQEVQKLQDGEASEFRLNDDGIFMLRDRICVPKDDQLRRAILEEAHSSAYALHPGS 620
Query: 350 NKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMD 529
KMY+ +K +YWW MK +AEFVA+CLTCQ++KAEHQ+PSG LQPL IPEWKWEH+TMD
Sbjct: 621 TKMYRTIKESYWWPGMKRDIAEFVAKCLTCQQIKAEHQKPSGTLQPLLIPEWKWEHVTMD 680
Query: 530 FVTDLPRTRGGHDAIWVVVDRL 595
FV LPRT+ G DAIWV+VDRL
Sbjct: 681 FVLGLPRTQSGKDAIWVIVDRL 702
>emb|CAA73042.1| polyprotein [Ananas comosus]
Length = 871
Score = 213 bits (541), Expect = 4e-53
Identities = 106/202 (52%), Positives = 142/202 (70%), Gaps = 4/202 (1%)
Frame = +2
Query: 2 DALSRKA--SLARLMIREWKSLEELSNWNL--TRTNTQISCANISVKPDLLKEIKEAQET 169
DALSRK+ +LA ++ + + +E++ L +T + + V+P LL IKE Q +
Sbjct: 423 DALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTPDTPMRLMTLVVQPTLLDRIKEKQAS 482
Query: 170 DVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGG 349
DV LQK+K K++ G +F++ +G++RFR ++ VP+D I+ IL EAHR+ Y IHPGG
Sbjct: 483 DVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICVPADSGIKEDILQEAHRAPYAIHPGG 542
Query: 350 NKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMD 529
KMYKDLK YWW +K V EFVA+CLTCQ+VKAEH+ P+G LQ L IP WKWE ITMD
Sbjct: 543 TKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQQVKAEHRVPAGKLQSLPIPVWKWEKITMD 602
Query: 530 FVTDLPRTRGGHDAIWVVVDRL 595
FVT LPR++ GHDAIWV+VDRL
Sbjct: 603 FVTGLPRSQAGHDAIWVIVDRL 624
>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1537
Score = 211 bits (538), Expect = 9e-53
Identities = 101/202 (50%), Positives = 140/202 (69%), Gaps = 4/202 (1%)
Frame = +2
Query: 2 DALSRKAS--LARLMIREWKSLEELSNWNLTRTNTQISC--ANISVKPDLLKEIKEAQET 169
DALSRK+S LA L + L E+ + + N + A+ V+P LL +I+E Q++
Sbjct: 996 DALSRKSSSSLATLRSSYFSMLLEMKSLGIQLNNGEDGTLLASFVVRPSLLNQIRELQKS 1055
Query: 170 DVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGG 349
D L++ +K+ G+ EF + ++G + R+++ VP D+Q+R IL EAH S Y +HPG
Sbjct: 1056 DDWLKQEVQKLQDGKASEFRLSDDGTLMLRDRICVPKDDQLRRAILEEAHYSAYALHPGS 1115
Query: 350 NKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMD 529
KMY+ +K +YWW M+ +AEFVA+CLTCQ++KAEHQ+PSG LQPL IPEWKWEH+TMD
Sbjct: 1116 TKMYRTIKESYWWPGMERDIAEFVAKCLTCQQIKAEHQKPSGTLQPLSIPEWKWEHVTMD 1175
Query: 530 FVTDLPRTRGGHDAIWVVVDRL 595
FV LPRT+ G DAIWV+VDRL
Sbjct: 1176 FVLGLPRTQSGKDAIWVIVDRL 1197
>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 211 bits (536), Expect = 2e-52
Identities = 103/201 (51%), Positives = 141/201 (70%), Gaps = 3/201 (1%)
Frame = +2
Query: 2 DALSRKASLARLMIREWKS--LEELSNWNLTRTNTQISCAN-ISVKPDLLKEIKEAQETD 172
DALSRKA +++++ + EEL + NL N C N + V+P L +I+E Q D
Sbjct: 530 DALSRKAYCNTILVQKNQPELYEELKHLNLEIVNQ--GCVNALEVQPTLQSQIREKQLED 587
Query: 173 VHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGGN 352
++++K+ + +G+ P FS E G + F N++ VP+ ++++ IL EAH S Y+IHPG
Sbjct: 588 EDIKEIKKNMRRGKAPGFSEDEQGTVWFGNRICVPNQQELKQSILKEAHESPYSIHPGST 647
Query: 353 KMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDF 532
KMY+DLK YWWV+MK ++AEFVA C CQRVKAEHQRP+GLLQPL IPEWKWE I MDF
Sbjct: 648 KMYQDLKEKYWWVSMKREIAEFVAHCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDF 707
Query: 533 VTDLPRTRGGHDAIWVVVDRL 595
+T LPRT+ G D+IWV++DRL
Sbjct: 708 ITGLPRTQTGCDSIWVIIDRL 728
>emb|CAJ65807.1| polyprotein [Citrus sinensis]
Length = 533
Score = 208 bits (530), Expect = 8e-52
Identities = 100/202 (49%), Positives = 138/202 (68%), Gaps = 4/202 (1%)
Frame = +2
Query: 2 DALSRKA--SLARLMIREWKSLEELSNWN--LTRTNTQISCANISVKPDLLKEIKEAQET 169
DALSRK+ S+A L L EL + L N + AN V+P L+ ++ + Q+
Sbjct: 256 DALSRKSFSSIAHLRGTYMPLLIELRSLGVELEVDNCRALIANFRVRPTLIDKVHQMQDQ 315
Query: 170 DVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGG 349
D+ L K+KE + K R +F++ +NG++ N++ VP ++++ I+ EAH S Y +HPG
Sbjct: 316 DLQLLKLKENVQKDLRTDFAVRDNGVLVMGNRLCVPDIKELKKEIMEEAHCSAYAMHPGS 375
Query: 350 NKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMD 529
KMY+ L+ +YWW MK ++AEFV+RCL CQ++KAEHQRP+G QPL IPEWKWEHITMD
Sbjct: 376 TKMYRTLRDHYWWQGMKREIAEFVSRCLVCQQIKAEHQRPAGFSQPLPIPEWKWEHITMD 435
Query: 530 FVTDLPRTRGGHDAIWVVVDRL 595
FVT LPRT+ GHD +WVVVDRL
Sbjct: 436 FVTGLPRTQSGHDGVWVVVDRL 457
>gb|ADB85273.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 897
Score = 208 bits (530), Expect = 8e-52
Identities = 103/200 (51%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Frame = +2
Query: 2 DALSRKASLARLMIREW--KSLEELSNWNLTRTNTQISCANISVKPDLLKEIKEAQETDV 175
DALSRK + L+++E K EE+ NL N A + V+P + ++I+E Q TD
Sbjct: 363 DALSRKGYCSTLLVQENQPKLYEEMRRLNLEIVNQDCVYA-LEVEPTVQRQIRENQATDK 421
Query: 176 HLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGGNK 355
LQ++K+ + + + P FS E GI+ F N++ VP + I+ +L E H S Y+IHPG K
Sbjct: 422 DLQEIKDNLKREKAPGFSEDEEGILWFGNRLCVPDCQAIKQLLLKETHESHYSIHPGSTK 481
Query: 356 MYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 535
MY++LK YWWV MK ++AEFVA C CQRVKAEHQRP+GLLQPL IP WKWE I MDF+
Sbjct: 482 MYQELKEMYWWVGMKREIAEFVAHCDVCQRVKAEHQRPAGLLQPLSIPGWKWEQIDMDFI 541
Query: 536 TDLPRTRGGHDAIWVVVDRL 595
T LPRT+ G+D+IWV+VDRL
Sbjct: 542 TGLPRTQSGYDSIWVIVDRL 561
>ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera]
Length = 937
Score = 208 bits (529), Expect = 1e-51
Identities = 101/197 (51%), Positives = 141/197 (71%), Gaps = 4/197 (2%)
Frame = +2
Query: 2 DALSRKA--SLARLMIREWKSLEELSNW--NLTRTNTQISCANISVKPDLLKEIKEAQET 169
DALS+K+ SLA + + + LE+L + ++ ++ AN V+P+L+ IK Q+
Sbjct: 25 DALSKKSVGSLAAIRGCQRQLLEDLRSVQVHMRVLDSGALVANFRVQPNLVGRIKALQKN 84
Query: 170 DVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGG 349
D++L ++ E++ KG +P+F + ++GI+RF ++ VP+D +R L EAH S+ IHPGG
Sbjct: 85 DLNLVQLMEEVKKGSKPDFVLSDDGILRFMTRLCVPNDGDLRREFLEEAHCSRLAIHPGG 144
Query: 350 NKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMD 529
KMYKDL++NYWW MK +A+FVARCL CQ+VKAEHQ+P G LQPL IPEWKWEHITMD
Sbjct: 145 TKMYKDLRQNYWWSGMKRDIAQFVARCLVCQQVKAEHQQPVGSLQPLAIPEWKWEHITMD 204
Query: 530 FVTDLPRTRGGHDAIWV 580
FV LPRT GG++AIWV
Sbjct: 205 FVIGLPRTSGGNNAIWV 221
>emb|CAE05830.1| OSJNBa0028M15.22 [Oryza sativa Japonica Group]
Length = 1324
Score = 204 bits (519), Expect = 1e-50
Identities = 101/202 (50%), Positives = 137/202 (67%), Gaps = 4/202 (1%)
Frame = +2
Query: 2 DALSRKASLARLMIR----EWKSLEELSNWNLTRTNTQISCANISVKPDLLKEIKEAQET 169
DALSRK+ L +R E E N ++ R A + KP LL +I+EAQ+
Sbjct: 787 DALSRKSHCNTLNVRGIPPELNQQMEALNLSIVRRGF---LATLEAKPTLLDQIREAQKN 843
Query: 170 DVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGG 349
D ++ + + + +G+ F+ E+G + N+V VP D++++ IL EAH S Y+IHPG
Sbjct: 844 DPDMRGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDKELKQLILQEAHESPYSIHPGS 903
Query: 350 NKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMD 529
KMY DLK YWWV+MK ++AEFVA C CQRVKAEHQRP+GLLQPL++PEWKW+ I MD
Sbjct: 904 TKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMD 963
Query: 530 FVTDLPRTRGGHDAIWVVVDRL 595
F+T LP+T+GG+D+IWVVVDRL
Sbjct: 964 FITGLPKTQGGYDSIWVVVDRL 985
>gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1290
Score = 203 bits (517), Expect = 2e-50
Identities = 99/202 (49%), Positives = 136/202 (67%), Gaps = 4/202 (1%)
Frame = +2
Query: 2 DALSRKAS--LARLMIREWKSLEELSNWNLTRTNTQISC--ANISVKPDLLKEIKEAQET 169
DALSRK+S LA L + L E+ + + N + A+ V+P LL +I+E Q+
Sbjct: 785 DALSRKSSSSLATLRSSYFPMLLEMKSLGIQLNNGEDGTLLASFVVRPSLLNQIRELQKF 844
Query: 170 DVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGG 349
D L++ +K+ GE EF + ++G + R+++ VP D+Q+R IL EAH S Y +HPG
Sbjct: 845 DDWLKQEVQKLQDGEASEFRLSDDGTLMLRDRICVPKDDQLRRAILEEAHSSAYALHPGS 904
Query: 350 NKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMD 529
KMY+ +K +YWW MK +AEFVA+CL CQ++KAEHQ+ SG LQPL IPEWKWEH+TMD
Sbjct: 905 TKMYQTIKESYWWPGMKRDIAEFVAKCLICQQIKAEHQKSSGTLQPLPIPEWKWEHVTMD 964
Query: 530 FVTDLPRTRGGHDAIWVVVDRL 595
FV LPRT+ G DAIWV++ RL
Sbjct: 965 FVLGLPRTQSGKDAIWVIMGRL 986
>gb|AAT85771.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709111|gb|ABF96906.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1169
Score = 201 bits (512), Expect = 9e-50
Identities = 100/202 (49%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Frame = +2
Query: 2 DALSRKASLARLMIREWKSLEELSNWNLTRTNTQIS----CANISVKPDLLKEIKEAQET 169
DALSRK+ L +R + N + N I A + KP LL +I+EAQ+
Sbjct: 652 DALSRKSHCNTLGVR---GIPPELNQQMEALNLSIVGRGFLATLEAKPTLLDQIREAQKN 708
Query: 170 DVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGG 349
D ++ + + + +G+ F+ E+G + N+V VP D +++ IL EAH S Y+IHPG
Sbjct: 709 DPDIRGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLILQEAHESPYSIHPGS 768
Query: 350 NKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMD 529
KMY DLK YWWV+MK ++AEFVA C CQRVKAEHQRP+GLLQPL++PEWKW+ I MD
Sbjct: 769 TKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMD 828
Query: 530 FVTDLPRTRGGHDAIWVVVDRL 595
F+T LP+T+GG+D+IWVVVDRL
Sbjct: 829 FITGLPKTQGGYDSIWVVVDRL 850
>gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 666
Score = 201 bits (511), Expect = 1e-49
Identities = 103/206 (50%), Positives = 137/206 (66%), Gaps = 8/206 (3%)
Frame = +2
Query: 2 DALSRKA--SLA------RLMIREWKSLEELSNWNLTRTNTQISCANISVKPDLLKEIKE 157
DALSRK+ SLA R ++RE SL ++ L T A+ V+P L+ +IKE
Sbjct: 246 DALSRKSMGSLAHISIGRRSLVREIHSLGDIGV-RLEVAETNALLAHFRVRPILMDKIKE 304
Query: 158 AQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTI 337
AQ D + K E + F+ +G++R+ ++YVP + +R +IL EAH + Y +
Sbjct: 305 AQSKDEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRRKILEEAHMAAYVV 364
Query: 338 HPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEH 517
HPG KMY+DLK YWW +K VAEFV++CL CQ+VKAEHQ+P+GLLQPL +PEWKWEH
Sbjct: 365 HPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEH 424
Query: 518 ITMDFVTDLPRTRGGHDAIWVVVDRL 595
I MDFVT LPRT GG+D+IW+VVDRL
Sbjct: 425 IAMDFVTGLPRTSGGYDSIWIVVDRL 450
>gb|ABB47100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1821
Score = 201 bits (511), Expect = 1e-49
Identities = 99/200 (49%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Frame = +2
Query: 2 DALSRKASLARLMIREW--KSLEELSNWNLTRTNTQISCANISVKPDLLKEIKEAQETDV 175
DALSRK+ L +R + +++ NL+ + A + KP LL +I+EAQ+ D
Sbjct: 1290 DALSRKSHCNTLNVRGIPPELSQQMEALNLSIVGHGVLAA-LEAKPTLLDQIREAQKNDP 1348
Query: 176 HLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGGNK 355
+ + + + +G+ F+ E+G + N+V VP D +++ IL EAH S Y+IHPG K
Sbjct: 1349 DMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLILQEAHESPYSIHPGSTK 1408
Query: 356 MYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 535
MY DLK YWWV+MK ++AEFVA C CQRVKAEHQRP+GLLQPL++PEWKW+ I MDF+
Sbjct: 1409 MYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFI 1468
Query: 536 TDLPRTRGGHDAIWVVVDRL 595
T LP+T+GG+D+IWVVVDRL
Sbjct: 1469 TGLPKTQGGYDSIWVVVDRL 1488
>gb|AAM14684.1|AC097446_13 Putative polyprotein [Oryza sativa Japonica Group]
gi|22725924|gb|AAN04934.1| Putative polyprotein [Oryza
sativa Japonica Group] gi|31430228|gb|AAP52174.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1569
Score = 201 bits (511), Expect = 1e-49
Identities = 101/203 (49%), Positives = 140/203 (68%), Gaps = 5/203 (2%)
Frame = +2
Query: 2 DALSRKASLARL----MIREWKSLEELSNWNLTRT-NTQISCANISVKPDLLKEIKEAQE 166
DALSRK+ L M E K EE++ NL + QI+ N+ ++P L +I+EAQ+
Sbjct: 1047 DALSRKSHCNHLRTEGMAPELK--EEIAQLNLHMVPHGQIN--NLDIQPLLRTQIEEAQK 1102
Query: 167 TDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPG 346
+ ++++KE+++ G EFS E ++ ++ ++YVP +R IL EAH+S Y++HPG
Sbjct: 1103 DNEEIREVKERLVAGFAKEFSTDEKDVLWYKKRIYVPEQGGLRGLILKEAHKSAYSLHPG 1162
Query: 347 GNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITM 526
KMY+DLK YWW NMK VAE+VA C CQ+VKAEHQRP+GLLQPLRIPEWKW+ I M
Sbjct: 1163 STKMYQDLKEGYWWPNMKRDVAEYVALCDVCQKVKAEHQRPAGLLQPLRIPEWKWDEIGM 1222
Query: 527 DFVTDLPRTRGGHDAIWVVVDRL 595
DF+ LP+T G+D+IWV+VDRL
Sbjct: 1223 DFIVGLPKTATGYDSIWVIVDRL 1245
>gb|AAM74399.1|AC119149_14 Putative retroelement [Oryza sativa Japonica Group]
gi|31431043|gb|AAP52881.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1821
Score = 201 bits (511), Expect = 1e-49
Identities = 99/200 (49%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Frame = +2
Query: 2 DALSRKASLARLMIREW--KSLEELSNWNLTRTNTQISCANISVKPDLLKEIKEAQETDV 175
DALSRK+ L +R + +++ NL+ + A + KP LL +I+EAQ+ D
Sbjct: 1290 DALSRKSHCNTLNVRGIPPELSQQMEALNLSIVGHGVLAA-LEAKPTLLDQIREAQKNDP 1348
Query: 176 HLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGGNK 355
+ + + + +G+ F+ E+G + N+V VP D +++ IL EAH S Y+IHPG K
Sbjct: 1349 DMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLILQEAHESPYSIHPGSTK 1408
Query: 356 MYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 535
MY DLK YWWV+MK ++AEFVA C CQRVKAEHQRP+GLLQPL++PEWKW+ I MDF+
Sbjct: 1409 MYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFI 1468
Query: 536 TDLPRTRGGHDAIWVVVDRL 595
T LP+T+GG+D+IWVVVDRL
Sbjct: 1469 TGLPKTQGGYDSIWVVVDRL 1488
>gb|AAK51585.1|AC022352_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1862
Score = 201 bits (511), Expect = 1e-49
Identities = 99/200 (49%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Frame = +2
Query: 2 DALSRKASLARLMIREW--KSLEELSNWNLTRTNTQISCANISVKPDLLKEIKEAQETDV 175
DALSRK+ L +R + +++ NL+ + A + KP LL +I+EAQ+ D
Sbjct: 1331 DALSRKSHCNTLNVRGIPPELSQQMEALNLSIVGHGVLAA-LEAKPTLLDQIREAQKNDP 1389
Query: 176 HLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGGNK 355
+ + + + +G+ F+ E+G + N+V VP D +++ IL EAH S Y+IHPG K
Sbjct: 1390 DMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLILQEAHESPYSIHPGSTK 1449
Query: 356 MYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 535
MY DLK YWWV+MK ++AEFVA C CQRVKAEHQRP+GLLQPL++PEWKW+ I MDF+
Sbjct: 1450 MYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFI 1509
Query: 536 TDLPRTRGGHDAIWVVVDRL 595
T LP+T+GG+D+IWVVVDRL
Sbjct: 1510 TGLPKTQGGYDSIWVVVDRL 1529
>gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao]
Length = 860
Score = 200 bits (509), Expect = 2e-49
Identities = 103/206 (50%), Positives = 136/206 (66%), Gaps = 8/206 (3%)
Frame = +2
Query: 2 DALSRKA--SLA------RLMIREWKSLEELSNWNLTRTNTQISCANISVKPDLLKEIKE 157
DALSRK+ SLA R ++RE SL ++ L T A+ V+P L+ +IKE
Sbjct: 363 DALSRKSMGSLAHISIGRRSLVREIHSLGDIGV-RLEVAETSALLAHFRVRPILMDKIKE 421
Query: 158 AQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTI 337
AQ D + K E + F+ +G++R+ ++YVP + +R IL EAH + Y +
Sbjct: 422 AQSKDEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVV 481
Query: 338 HPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEH 517
HPG KMY+DLK YWW +K VAEFV++CL CQ+VKAEHQ+P+GLLQPL +PEWKWEH
Sbjct: 482 HPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEH 541
Query: 518 ITMDFVTDLPRTRGGHDAIWVVVDRL 595
I MDFVT LPRT GG+D+IW+VVDRL
Sbjct: 542 IAMDFVTGLPRTSGGYDSIWIVVDRL 567
>gb|AAK51574.1|AC022352_10 Putative retroelement [Oryza sativa Japonica Group]
gi|31431004|gb|AAP52842.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1810
Score = 200 bits (509), Expect = 2e-49
Identities = 100/202 (49%), Positives = 134/202 (66%), Gaps = 4/202 (1%)
Frame = +2
Query: 2 DALSRKASLARLMIR----EWKSLEELSNWNLTRTNTQISCANISVKPDLLKEIKEAQET 169
DALSRK+ L +R E E N N+ A + KP LL +I+EAQ+
Sbjct: 1279 DALSRKSHCNNLNVRGIPPELSQQMEALNLNIVGRGF---LAALEAKPTLLDQIREAQKN 1335
Query: 170 DVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGG 349
D + + + + +G+ F+ E+G + N+V VP + +++ IL EAH S Y+IHPG
Sbjct: 1336 DPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLILQEAHESPYSIHPGS 1395
Query: 350 NKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMD 529
KMY DLK YWWV+MK ++AEFVA C CQRVKAEHQRP+GLLQPL++PEWKW+ I MD
Sbjct: 1396 TKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMD 1455
Query: 530 FVTDLPRTRGGHDAIWVVVDRL 595
F+T LP+T+GG+D+IWVVVDRL
Sbjct: 1456 FITGLPKTQGGYDSIWVVVDRL 1477
>gb|AAQ56540.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 803
Score = 200 bits (509), Expect = 2e-49
Identities = 100/202 (49%), Positives = 136/202 (67%), Gaps = 4/202 (1%)
Frame = +2
Query: 2 DALSRKASLARLMIREWKSLEELSNWNLTRTNTQISC----ANISVKPDLLKEIKEAQET 169
DALSRK+ L +R + N L N I A + KP LL +I+EAQ+
Sbjct: 317 DALSRKSRCNTLGVR---GIPPELNQQLEALNLSIVSHGFLATLEAKPILLDQIREAQKN 373
Query: 170 DVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTIHPGG 349
D + + + + +G+ F+ E+G + N+V VP+D++++ IL EAH S Y+IHPG
Sbjct: 374 DPDMHGILKNMKQGKAAGFTEDEHGTLWNGNRVCVPNDKELKQLILQEAHESPYSIHPGS 433
Query: 350 NKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMD 529
KMY DLK YWWV+MK ++AEF+A C CQRVKAEHQRP+GLLQPL++PEWKW+ I MD
Sbjct: 434 TKMYLDLKEKYWWVSMKREIAEFMALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMD 493
Query: 530 FVTDLPRTRGGHDAIWVVVDRL 595
F+T LP+T+GG+D+IWVVVDRL
Sbjct: 494 FITGLPKTQGGYDSIWVVVDRL 515
>gb|EOY21478.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 878
Score = 200 bits (508), Expect = 3e-49
Identities = 103/206 (50%), Positives = 135/206 (65%), Gaps = 8/206 (3%)
Frame = +2
Query: 2 DALSRKA--SLA------RLMIREWKSLEELSNWNLTRTNTQISCANISVKPDLLKEIKE 157
DALSRK+ SLA R ++RE SL ++ L T A+ V+P L+ IKE
Sbjct: 529 DALSRKSMGSLAHIFIGRRSLVREIHSLGDIGV-RLEVAETNALLAHFRVRPILMDRIKE 587
Query: 158 AQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTI 337
AQ D + K E + F+ +G++R+ ++YVP + +R IL EAH + Y +
Sbjct: 588 AQSKDEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVV 647
Query: 338 HPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEH 517
HPG KMY+DLK YWW +K VAEFV++CL CQ+VKAEHQ+P+GLLQPL +PEWKWEH
Sbjct: 648 HPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEH 707
Query: 518 ITMDFVTDLPRTRGGHDAIWVVVDRL 595
I MDFVT LPRT GG+D+IW+VVDRL
Sbjct: 708 IAMDFVTGLPRTSGGYDSIWIVVDRL 733
>gb|EOY20325.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao]
Length = 460
Score = 200 bits (508), Expect = 3e-49
Identities = 103/206 (50%), Positives = 135/206 (65%), Gaps = 8/206 (3%)
Frame = +2
Query: 2 DALSRKA--SLA------RLMIREWKSLEELSNWNLTRTNTQISCANISVKPDLLKEIKE 157
DALSRK+ SLA R ++RE SL ++ L T A+ V+P L+ IKE
Sbjct: 115 DALSRKSMGSLAHISIGRRSLVREIHSLGDIGV-RLEVAETNALLAHFRVRPILMDRIKE 173
Query: 158 AQETDVHLQKMKEKILKGERPEFSIPENGIIRFRNQVYVPSDEQIRNRILAEAHRSKYTI 337
AQ D + K E + F+ +G++R+ ++YVP + +R IL EAH + Y +
Sbjct: 174 AQSKDEFVIKALEDPQGRKGKMFTKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVV 233
Query: 338 HPGGNKMYKDLKRNYWWVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEH 517
HPG KMY+DLK YWW +K VAEFV++CL CQ+VKAEHQ+P+GLLQPL +PEWKWEH
Sbjct: 234 HPGATKMYQDLKEVYWWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEH 293
Query: 518 ITMDFVTDLPRTRGGHDAIWVVVDRL 595
I MDFVT LPRT GG+D+IW+VVDRL
Sbjct: 294 IAMDFVTGLPRTSGGYDSIWIVVDRL 319