BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00023058
         (1331 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like i...   416   e-114
ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [...   416   e-113
ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like i...   412   e-112
ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [...   410   e-112
ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [...   410   e-112
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   402   e-109
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              402   e-109
ref|XP_002532622.1| Far upstream element-binding protein, putati...   389   e-105
ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Popu...   389   e-105
gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [The...   383   e-104
gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [The...   380   e-103
ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Popu...   377   e-102
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [...   374   e-101
gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]     371   e-100
ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like i...   370   e-100
ref|NP_196063.1| TOMV RNA binding protein [Arabidopsis thaliana]...   367   8e-99
gb|ESW16249.1| hypothetical protein PHAVU_007G141100g [Phaseolus...   364   4e-98
ref|XP_006398901.1| hypothetical protein EUTSA_v10014068mg [Eutr...   363   7e-98
ref|XP_006379516.1| hypothetical protein POPTR_0008s03070g [Popu...   363   1e-97
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i...   361   3e-97

>ref|XP_006345844.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Solanum
            tuberosum]
          Length = 327

 Score =  416 bits (1070), Expect = e-114
 Identities = 216/327 (66%), Positives = 267/327 (81%), Gaps = 8/327 (2%)
 Frame = -3

Query: 1245 MSME-ENKSAYSAASPEVQQNQSPPRES-SPPP--DNEEKVTHLRFLLSNAEAGSVIGKG 1078
            M+ME   +S Y++++  +Q++ S PR+S SPPP  D+EE    ++FLLSNAEAGS+IGKG
Sbjct: 1    MAMEGAAQSEYNSSTEGIQEHSSSPRKSQSPPPSSDHEENKISIKFLLSNAEAGSIIGKG 60

Query: 1077 GSTINDIQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQD 898
            GSTI+D Q++SGARIQLSRN E+FPGT DRI+MVSG++DD+LKAVDLIL+KLLDE YV+D
Sbjct: 61   GSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGSIDDVLKAVDLILNKLLDESYVED 120

Query: 897  GGETVPESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTV 718
            GG+  P SK+RLVVPNSSCGG+IGKGGS+I+S IEDSRA IKI PQD  +PGLHDR+V V
Sbjct: 121  GGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIV 180

Query: 717  TGALAEQMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYG-PNGAGVKYQNNRFPN 541
             G L EQMRA+ELIL KL ED +Y Q+ N PFPYA AY GMNYG PNG G +Y NNR+ N
Sbjct: 181  IGTLGEQMRAIELILYKLAEDTHYVQNMNAPFPYAAAYLGMNYGPPNGIGGRYPNNRYQN 240

Query: 540  KLQ---EDRSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRK 370
            K++   ED ++S+TIG+ADE          R++ME+SQ+SGARIKIS+RGDFMSGTSDRK
Sbjct: 241  KMEPNSEDGNNSVTIGVADERIGLVLGRNGRSVMEISQVSGARIKISDRGDFMSGTSDRK 300

Query: 369  VTITGSQRAIRLAESMISRKIDSVTES 289
            VTITGSQRAI +AESMIS+K+ +VTES
Sbjct: 301  VTITGSQRAISIAESMISKKVATVTES 327


>ref|XP_004239711.1| PREDICTED: RNA-binding protein Nova-1-like [Solanum lycopersicum]
          Length = 328

 Score =  416 bits (1069), Expect = e-113
 Identities = 217/328 (66%), Positives = 268/328 (81%), Gaps = 9/328 (2%)
 Frame = -3

Query: 1245 MSME-ENKSAYSAASPEVQQNQSPPRES-SPPP--DNEEKVTHLRFLLSNAEAGSVIGKG 1078
            M+ME   +S Y++++  VQ++ S PR+S SPPP  D++E    ++FLLSNAEAGS+IGKG
Sbjct: 1    MAMEGAAQSEYNSSTEGVQEHSSSPRKSQSPPPSTDHDENKISIKFLLSNAEAGSIIGKG 60

Query: 1077 GSTINDIQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQD 898
            GSTI+D Q++SGARIQLSRN E+FPGT DRI+MVSG +DD+LKAVDL+L+KLLDE YV+D
Sbjct: 61   GSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGPIDDVLKAVDLVLNKLLDESYVED 120

Query: 897  GGETVPESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTV 718
            GG+  P SK+RLVVPNSSCGG+IGKGGS+I+S IEDSRA IKI PQD  +PGLHDR+V V
Sbjct: 121  GGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIV 180

Query: 717  TGALAEQMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYG-PNGA-GVKYQNNRFP 544
             G L EQMRA+ELIL KL ED +Y Q+ N PFPYA AY GMNYG PNG  G +Y NNR+ 
Sbjct: 181  IGTLGEQMRAIELILYKLAEDAHYVQNMNAPFPYAAAYLGMNYGPPNGVIGGRYPNNRYQ 240

Query: 543  NKLQ---EDRSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDR 373
            NK++   EDR++S+TIG+ADEH         R++ME+SQ+SGARIKIS+RGDFMSGTSDR
Sbjct: 241  NKMEPNSEDRNNSVTIGVADEHIGLVLGRNGRSVMEISQVSGARIKISDRGDFMSGTSDR 300

Query: 372  KVTITGSQRAIRLAESMISRKIDSVTES 289
            KVTITGSQRAI +AESMIS+K+ +VTES
Sbjct: 301  KVTITGSQRAISIAESMISKKVATVTES 328


>ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Solanum
            tuberosum]
          Length = 326

 Score =  412 bits (1058), Expect = e-112
 Identities = 216/327 (66%), Positives = 267/327 (81%), Gaps = 8/327 (2%)
 Frame = -3

Query: 1245 MSME-ENKSAYSAASPEVQQNQSPPRES-SPPP--DNEEKVTHLRFLLSNAEAGSVIGKG 1078
            M+ME   +S Y++++  +Q++ S PR+S SPPP  D+EE    ++FLLSNAEAGS+IGKG
Sbjct: 1    MAMEGAAQSEYNSSTEGIQEHSSSPRKSQSPPPSSDHEENKISIKFLLSNAEAGSIIGKG 60

Query: 1077 GSTINDIQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQD 898
            GSTI+D Q++SGARIQLSRN E+FPGT DRI+MVSG++DD+LKAVDLIL+KLLDE YV+D
Sbjct: 61   GSTISDFQARSGARIQLSRNNEFFPGTMDRIVMVSGSIDDVLKAVDLILNKLLDESYVED 120

Query: 897  GGETVPESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTV 718
            GG+  P SK+RLVVPNSSCGG+IGKGGS+I+S IEDSRA IKI PQD  +PGLHDR+V V
Sbjct: 121  GGDVGPRSKVRLVVPNSSCGGIIGKGGSVIKSFIEDSRAGIKILPQDENFPGLHDRIVIV 180

Query: 717  TGALAEQMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYG-PNGAGVKYQNNRFPN 541
             G L EQMRA+ELIL KL ED +Y Q+ N PFPYA AY GMNYG PNG G +Y NNR+ N
Sbjct: 181  IGTLGEQMRAIELILYKLAEDTHYVQNMNAPFPYA-AYLGMNYGPPNGIGGRYPNNRYQN 239

Query: 540  KLQ---EDRSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRK 370
            K++   ED ++S+TIG+ADE          R++ME+SQ+SGARIKIS+RGDFMSGTSDRK
Sbjct: 240  KMEPNSEDGNNSVTIGVADERIGLVLGRNGRSVMEISQVSGARIKISDRGDFMSGTSDRK 299

Query: 369  VTITGSQRAIRLAESMISRKIDSVTES 289
            VTITGSQRAI +AESMIS+K+ +VTES
Sbjct: 300  VTITGSQRAISIAESMISKKVATVTES 326


>ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum tuberosum]
          Length = 328

 Score =  410 bits (1053), Expect = e-112
 Identities = 218/325 (67%), Positives = 254/325 (78%), Gaps = 8/325 (2%)
 Frame = -3

Query: 1245 MSMEENKSAYSAASPEVQQNQSPPRESSPPP---DNEEKVTHLRFLLSNAEAGSVIGKGG 1075
            M+ME    +   +S E Q  QS PR+S PPP   D+EEK T+++FLLSNAEAGS+IGKGG
Sbjct: 1    MAMEGGAESNYNSSTESQLEQSSPRKSPPPPPSQDHEEKATYVKFLLSNAEAGSIIGKGG 60

Query: 1074 STINDIQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDG 895
            STI + QS+SGARIQLSRN+E FPGT DRI+MVSG +DDILKAVDLIL KL+DEFY +DG
Sbjct: 61   STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLILGKLMDEFYAEDG 120

Query: 894  GETVPESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVT 715
            GE  P SK RLVVPNSSCGG+IGKGG+ I+S IEDSRA IKISPQD  +PGLHDR+VTVT
Sbjct: 121  GEVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVT 180

Query: 714  GALAEQMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYG---PNGAGVKYQNNRFP 544
            G L EQMRA+ELIL KL ED +Y QS N PF YA  Y GMNYG   PN  G +Y NNR  
Sbjct: 181  GTLEEQMRAIELILFKLAEDPHYMQSMNAPFQYAAVYVGMNYGYGPPNRVGGRYPNNRQQ 240

Query: 543  NKL--QEDRSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRK 370
            NK+   E   +S+TIG+ADEH         R+I+E+SQLSGARIKIS+RGDF+SGTSDRK
Sbjct: 241  NKVAPPEVGDNSMTIGVADEHVGLVLGRNGRSIIEISQLSGARIKISDRGDFLSGTSDRK 300

Query: 369  VTITGSQRAIRLAESMISRKIDSVT 295
            VTITGSQRAIR AESMIS+KI +V+
Sbjct: 301  VTITGSQRAIRTAESMISQKIATVS 325


>ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum lycopersicum]
          Length = 328

 Score =  410 bits (1053), Expect = e-112
 Identities = 216/325 (66%), Positives = 254/325 (78%), Gaps = 8/325 (2%)
 Frame = -3

Query: 1245 MSMEENKSAYSAASPEVQQNQSPPRESSPP---PDNEEKVTHLRFLLSNAEAGSVIGKGG 1075
            M+ME    +   +S E Q  QS PR+S PP    D+EEK T+++FLLSNAEAGS+IGKGG
Sbjct: 1    MAMEGGAESNYNSSTESQLEQSSPRKSPPPLPSQDHEEKATYVKFLLSNAEAGSIIGKGG 60

Query: 1074 STINDIQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDG 895
            STI + QS+SGARIQLSRN+E FPGT DRI+MVSG +DDILKAVDLIL KL+DEFY +DG
Sbjct: 61   STITEFQSRSGARIQLSRNYEVFPGTPDRIVMVSGFLDDILKAVDLILGKLMDEFYAEDG 120

Query: 894  GETVPESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVT 715
            G+  P SK RLVVPNSSCGG+IGKGG+ I+S IEDSRA IKISPQD  +PGLHDR+VTVT
Sbjct: 121  GDVDPRSKFRLVVPNSSCGGIIGKGGATIKSFIEDSRAGIKISPQDYNFPGLHDRIVTVT 180

Query: 714  GALAEQMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYG---PNGAGVKYQNNRFP 544
            G L EQMRA+ELIL KL +D YY QS N PF YA  Y GMNYG   PN  G +Y NNR  
Sbjct: 181  GTLEEQMRAIELILFKLADDPYYMQSMNAPFQYAAVYVGMNYGYGPPNRVGGRYPNNRQQ 240

Query: 543  NKLQ--EDRSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRK 370
            NK+   E R +S+TIG+ADEH         R+I+E+SQLSGARIKIS+RGDF+SGTSDRK
Sbjct: 241  NKVAPLEVRDNSMTIGVADEHVGLVLGRNGRSIIEISQLSGARIKISDRGDFLSGTSDRK 300

Query: 369  VTITGSQRAIRLAESMISRKIDSVT 295
            VTITGSQRAIR AESMISRK+ +++
Sbjct: 301  VTITGSQRAIRTAESMISRKVATIS 325


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  402 bits (1033), Expect = e-109
 Identities = 214/317 (67%), Positives = 252/317 (79%), Gaps = 1/317 (0%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQ-QNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIN 1063
            ME  +SAY  +SPEV  +  SPPR  SP  D  EK T++RFL+SNA AGSVIGKGGSTIN
Sbjct: 1    MESPESAY-VSSPEVPPKRSSPPR--SPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTIN 57

Query: 1062 DIQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETV 883
            D QSQSGARIQLSRN E+FPGTSDRIIM+SG  ++I+KA++LIL+KLL E + +DG E  
Sbjct: 58   DFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEAD 117

Query: 882  PESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALA 703
            P SK+RL+VPNSSCGG+IGKGGS I+S IEDS+ASIKISPQDN Y GL DRLVT+ G+L 
Sbjct: 118  PRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLE 177

Query: 702  EQMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYGPNGAGVKYQNNRFPNKLQEDR 523
            EQMRA++LIL KL ED +Y Q  N PF YA AYN MNYGPNGAG K+QNN+      EDR
Sbjct: 178  EQMRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPNGAGGKFQNNK------EDR 231

Query: 522  SSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGSQRA 343
            S+S+TIG+ADEH         RNIM++SQ SGARIKIS+RGDFMSGT+DRKVTITGSQRA
Sbjct: 232  SNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRA 291

Query: 342  IRLAESMISRKIDSVTE 292
            IR AESMI +K+ S +E
Sbjct: 292  IRAAESMIMQKVASASE 308


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  402 bits (1033), Expect = e-109
 Identities = 214/317 (67%), Positives = 252/317 (79%), Gaps = 1/317 (0%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQ-QNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIN 1063
            ME  +SAY  +SPEV  +  SPPR  SP  D  EK T++RFL+SNA AGSVIGKGGSTIN
Sbjct: 49   MESPESAY-VSSPEVPPKRSSPPR--SPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTIN 105

Query: 1062 DIQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETV 883
            D QSQSGARIQLSRN E+FPGTSDRIIM+SG  ++I+KA++LIL+KLL E + +DG E  
Sbjct: 106  DFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEAD 165

Query: 882  PESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALA 703
            P SK+RL+VPNSSCGG+IGKGGS I+S IEDS+ASIKISPQDN Y GL DRLVT+ G+L 
Sbjct: 166  PRSKVRLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLE 225

Query: 702  EQMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYGPNGAGVKYQNNRFPNKLQEDR 523
            EQMRA++LIL KL ED +Y Q  N PF YA AYN MNYGPNGAG K+QNN+      EDR
Sbjct: 226  EQMRAIDLILSKLTEDPHYTQFMNAPFSYAAAYNSMNYGPNGAGGKFQNNK------EDR 279

Query: 522  SSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGSQRA 343
            S+S+TIG+ADEH         RNIM++SQ SGARIKIS+RGDFMSGT+DRKVTITGSQRA
Sbjct: 280  SNSVTIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRA 339

Query: 342  IRLAESMISRKIDSVTE 292
            IR AESMI +K+ S +E
Sbjct: 340  IRAAESMIMQKVASASE 356


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
            gi|223527642|gb|EEF29753.1| Far upstream element-binding
            protein, putative [Ricinus communis]
          Length = 314

 Score =  389 bits (1000), Expect = e-105
 Identities = 197/316 (62%), Positives = 248/316 (78%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIND 1060
            ME  +S+Y ++     + +SPP   SP  D+ EK T++RFL+SNA AGSVIGKGG+TI D
Sbjct: 1    MESTESSYVSSPEAPPRKRSPPPPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITD 60

Query: 1059 IQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVP 880
             QSQSGARIQLSRN+E+FPGTSDRII++SG +DD+LK V+L+L+KLL E + +DG +  P
Sbjct: 61   FQSQSGARIQLSRNYEFFPGTSDRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDP 120

Query: 879  ESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAE 700
             +K+RLVVPNSSCG +IGKGGSII+S IE+S+A IKISPQDN + GL+DRLVTVTG L E
Sbjct: 121  RTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEE 180

Query: 699  QMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYGPNGAGVKYQNNRFPNKLQEDRS 520
            QMRA++LIL KL +D +Y Q+ + PF YAVAYN MNYG NGAG K+QNN+      EDR+
Sbjct: 181  QMRAIDLILSKLYDDPHYVQTMHAPFSYAVAYNSMNYGANGAGGKFQNNK------EDRT 234

Query: 519  SSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGSQRAI 340
            +S+TIG+AD H         RNIME+SQ+SGARIKIS+RGDFMSGT+DRK+ ITGSQRAI
Sbjct: 235  NSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAI 294

Query: 339  RLAESMISRKIDSVTE 292
            R AE MI +K+   +E
Sbjct: 295  RTAEGMIMQKVAYASE 310


>ref|XP_006378792.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
            gi|550330463|gb|ERP56589.1| hypothetical protein
            POPTR_0010s23710g [Populus trichocarpa]
          Length = 313

 Score =  389 bits (999), Expect = e-105
 Identities = 199/316 (62%), Positives = 246/316 (77%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIND 1060
            ME  +S+Y  +SPE  Q +SPP  +SPP D+EEK T+ RFL+SNA AGSVIGKGG+TI D
Sbjct: 1    MESTESSY-VSSPEQPQKRSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITD 59

Query: 1059 IQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVP 880
             QSQSGARIQLSRN+E+FPGTSDRIIMVSG +DD+LKAV+LI++KLL E   +DG E  P
Sbjct: 60   FQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEP 119

Query: 879  ESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAE 700
              ++RLVVPNS+CG +IGKGGSII+S IE+S A IKISP D  + GL DRLVTVTG L E
Sbjct: 120  RMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEE 179

Query: 699  QMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYGPNGAGVKYQNNRFPNKLQEDRS 520
            QM A++LIL KL +D +Y Q+ + PF YA AYN MN+GPNGA VK+Q+N+      +D +
Sbjct: 180  QMHAIDLILSKLTDDPHYSQTMHAPFSYAAAYNSMNHGPNGAAVKFQHNK------DDIT 233

Query: 519  SSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGSQRAI 340
            +S+TIG+ADEH         RNIME+SQ SGAR+KIS+RGDFMSGT+DRK+TITGSQRAI
Sbjct: 234  NSVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAI 293

Query: 339  RLAESMISRKIDSVTE 292
            R AE MI +K+   +E
Sbjct: 294  RAAEDMIMQKVSYASE 309


>gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
            gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
            gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
          Length = 313

 Score =  383 bits (984), Expect = e-104
 Identities = 197/316 (62%), Positives = 248/316 (78%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIND 1060
            ME  +S+Y  +SPE  + +SPP   SP  +  EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1    MESTESSY-VSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 1059 IQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVP 880
             QS+SGARIQLSRN E+FPGTSDRIIM+SGT+D++LKA++LIL+KLL+E  ++D  +  P
Sbjct: 60   FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEP 119

Query: 879  ESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAE 700
             +K+RL+VPNSSCG +IGKGG+ I+S IEDS+A IKISPQDN + GL+DRLVT+TG L E
Sbjct: 120  RTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDE 179

Query: 699  QMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYGPNGAGVKYQNNRFPNKLQEDRS 520
            QMRA++LIL KL ED +Y Q+ + PF YA  YN M+Y  NGAG K+QN++      EDRS
Sbjct: 180  QMRAIDLILSKLSEDPHYLQAMHAPFSYAATYNSMSYPSNGAGGKFQNHK------EDRS 233

Query: 519  SSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGSQRAI 340
            +S+TIG+AD H         RNIME+SQLSGARIKIS+RGDFMSGT+DRKVTITGSQRAI
Sbjct: 234  NSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAI 293

Query: 339  RLAESMISRKIDSVTE 292
            R AESMI +K+   T+
Sbjct: 294  RQAESMIMQKVAYATD 309


>gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
          Length = 314

 Score =  380 bits (976), Expect = e-103
 Identities = 198/317 (62%), Positives = 249/317 (78%), Gaps = 1/317 (0%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIND 1060
            ME  +S+Y  +SPE  + +SPP   SP  +  EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1    MESTESSY-VSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 1059 IQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVP 880
             QS+SGARIQLSRN E+FPGTSDRIIM+SGT+D++LKA++LIL+KLL+E  ++D  +  P
Sbjct: 60   FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEP 119

Query: 879  ESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAE 700
             +K+RL+VPNSSCG +IGKGG+ I+S IEDS+A IKISPQDN + GL+DRLVT+TG L E
Sbjct: 120  RTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDE 179

Query: 699  QMRAVELILLKLVEDQYYHQSGNTPFPYAVA-YNGMNYGPNGAGVKYQNNRFPNKLQEDR 523
            QMRA++LIL KL ED +Y Q+ + PF YA A YN M+Y  NGAG K+QN++      EDR
Sbjct: 180  QMRAIDLILSKLSEDPHYLQAMHAPFSYAAATYNSMSYPSNGAGGKFQNHK------EDR 233

Query: 522  SSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGSQRA 343
            S+S+TIG+AD H         RNIME+SQLSGARIKIS+RGDFMSGT+DRKVTITGSQRA
Sbjct: 234  SNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRA 293

Query: 342  IRLAESMISRKIDSVTE 292
            IR AESMI +K+   T+
Sbjct: 294  IRQAESMIMQKVAYATD 310


>ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
            gi|222865445|gb|EEF02576.1| hypothetical protein
            POPTR_0010s23710g [Populus trichocarpa]
          Length = 334

 Score =  377 bits (967), Expect = e-102
 Identities = 199/337 (59%), Positives = 246/337 (72%), Gaps = 21/337 (6%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIND 1060
            ME  +S+Y  +SPE  Q +SPP  +SPP D+EEK T+ RFL+SNA AGSVIGKGG+TI D
Sbjct: 1    MESTESSY-VSSPEQPQKRSPPPPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITD 59

Query: 1059 IQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVP 880
             QSQSGARIQLSRN+E+FPGTSDRIIMVSG +DD+LKAV+LI++KLL E   +DG E  P
Sbjct: 60   FQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEP 119

Query: 879  ESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAE 700
              ++RLVVPNS+CG +IGKGGSII+S IE+S A IKISP D  + GL DRLVTVTG L E
Sbjct: 120  RMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEE 179

Query: 699  QMRAVELILLKLVEDQYYHQSGNTPFPYA---------------------VAYNGMNYGP 583
            QM A++LIL KL +D +Y Q+ + PF YA                      AYN MN+GP
Sbjct: 180  QMHAIDLILSKLTDDPHYSQTMHAPFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGP 239

Query: 582  NGAGVKYQNNRFPNKLQEDRSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISER 403
            NGA VK+Q+N+      +D ++S+TIG+ADEH         RNIME+SQ SGAR+KIS+R
Sbjct: 240  NGAAVKFQHNK------DDITNSVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDR 293

Query: 402  GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 292
            GDFMSGT+DRK+TITGSQRAIR AE MI +K+   +E
Sbjct: 294  GDFMSGTTDRKITITGSQRAIRAAEDMIMQKVSYASE 330


>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
            gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
            protein Nova-2-like [Cucumis sativus]
          Length = 326

 Score =  374 bits (960), Expect = e-101
 Identities = 194/322 (60%), Positives = 246/322 (76%), Gaps = 6/322 (1%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIND 1060
            ME  +S+Y  +SPE    +SPP   SP  DN EK T++RFL+SNA AGSVIGKGGSTIND
Sbjct: 1    MESTESSY-VSSPEAPAKRSPPPPKSPNSDNMEKATYIRFLVSNAAAGSVIGKGGSTIND 59

Query: 1059 IQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVP 880
             QSQSGARIQLSRN E+FPGT+DRIIMVSG++++ILKA++L+L+KLL E + ++G +  P
Sbjct: 60   FQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEP 119

Query: 879  ESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAE 700
             +K+RL+VP+SSCG +IGKGGS I+S IEDS+A IKISPQDN Y    DRLVT++G + E
Sbjct: 120  RTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEE 179

Query: 699  QMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYGPNGAGV--KYQNN----RFPNK 538
            QMRA +LI+ KL ED +Y QS N PF Y  ++N MNYG NG G   ++QNN    R    
Sbjct: 180  QMRATDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKPDTRSSEI 239

Query: 537  LQEDRSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTIT 358
            +QE+R++S+TIG++D H         RNI+E+SQ SGARIKIS+RGDFMSGT+DRKVTIT
Sbjct: 240  VQEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTIT 299

Query: 357  GSQRAIRLAESMISRKIDSVTE 292
            GSQRAIR AESMI +K+   +E
Sbjct: 300  GSQRAIRAAESMILQKVAYASE 321


>gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
          Length = 334

 Score =  371 bits (952), Expect = e-100
 Identities = 197/337 (58%), Positives = 248/337 (73%), Gaps = 21/337 (6%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIND 1060
            ME  +S+Y  +SPE  + +SPP   SP  +  EK T++RFL+SNA AGSVIGKGGSTI +
Sbjct: 1    MESTESSY-VSSPEAARKRSPPPPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITE 59

Query: 1059 IQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVP 880
             QS+SGARIQLSRN E+FPGTSDRIIM+SGT+D++LKA++LIL+KLL+E  ++D  +  P
Sbjct: 60   FQSKSGARIQLSRNHEFFPGTSDRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEP 119

Query: 879  ESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAE 700
             +K+RL+VPNSSCG +IGKGG+ I+S IEDS+A IKISPQDN + GL+DRLVT+TG L E
Sbjct: 120  RTKVRLIVPNSSCGSIIGKGGATIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDE 179

Query: 699  QMRAVELILLKLVEDQYYHQSGNTPFPYA---------------------VAYNGMNYGP 583
            QMRA++LIL KL ED +Y Q+ + PF YA                       YN M+Y  
Sbjct: 180  QMRAIDLILSKLSEDPHYLQAMHAPFSYAGIFFSGFHGIPYAYVLPSVATATYNSMSYPS 239

Query: 582  NGAGVKYQNNRFPNKLQEDRSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISER 403
            NGAG K+QN++      EDRS+S+TIG+AD H         RNIME+SQLSGARIKIS+R
Sbjct: 240  NGAGGKFQNHK------EDRSNSVTIGVADGHIGLVLGRGGRNIMEISQLSGARIKISDR 293

Query: 402  GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 292
            GDFMSGT+DRKVTITGSQRAIR AESMI +K+   T+
Sbjct: 294  GDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATD 330


>ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Cicer
            arietinum]
          Length = 315

 Score =  370 bits (949), Expect = e-100
 Identities = 195/318 (61%), Positives = 247/318 (77%), Gaps = 2/318 (0%)
 Frame = -3

Query: 1239 MEENKSAY--SAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTI 1066
            ME  +S+Y  S   P  Q+  SPP +S    D+ EK T++RFL+SN+ AGSVIGKGGSTI
Sbjct: 1    MESTESSYVSSPEGPRKQRATSPPPKSPSQDDSVEKPTYVRFLVSNSAAGSVIGKGGSTI 60

Query: 1065 NDIQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGET 886
             D QSQSGARIQLSRN E+FPGT+DRIIMVSG +++IL+AV+LILSKLL E + +D  + 
Sbjct: 61   TDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEILRAVELILSKLLTELHSEDDNDV 120

Query: 885  VPESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGAL 706
             P++K+RL+VPN SCGG+IGKGG+ IRS IEDS+A IKISPQDN Y G +DR+V+VTG L
Sbjct: 121  EPKTKVRLIVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNSYYGQNDRIVSVTGTL 180

Query: 705  AEQMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYGPNGAGVKYQNNRFPNKLQED 526
             EQMRAV+LI+ KL ED +Y QS N+PF Y+ AYN +NY PNGA  K+QN++      E+
Sbjct: 181  DEQMRAVDLIVSKLAEDPHYSQSMNSPFSYS-AYNSVNYRPNGAAGKFQNSK------EE 233

Query: 525  RSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGSQR 346
            RS+S+TIGIADEH         RNI +++Q+SGA+IKIS+RGD++SGT+DRKVTITGSQR
Sbjct: 234  RSNSMTIGIADEHIGLVVGRGGRNIADITQVSGAKIKISDRGDYISGTTDRKVTITGSQR 293

Query: 345  AIRLAESMISRKIDSVTE 292
            AIR AESMI +K+   TE
Sbjct: 294  AIRTAESMIMQKVAYATE 311


>ref|NP_196063.1| TOMV RNA binding protein [Arabidopsis thaliana]
            gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30
            [Arabidopsis thaliana] gi|7406447|emb|CAB85549.1|
            putative RNA-binding protein [Arabidopsis thaliana]
            gi|21554568|gb|AAM63617.1| putative RNA-binding protein
            [Arabidopsis thaliana] gi|23507775|gb|AAN38691.1|
            At5g04430/T32M21_30 [Arabidopsis thaliana]
            gi|332003361|gb|AED90744.1| TOMV RNA binding protein
            [Arabidopsis thaliana]
          Length = 313

 Score =  367 bits (941), Expect = 8e-99
 Identities = 182/314 (57%), Positives = 240/314 (76%)
 Frame = -3

Query: 1233 ENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTINDIQ 1054
            E+  +Y+A SPE    +SP    S   D+ EK TH+RFL+SNA AGSVIGKGGSTI + Q
Sbjct: 2    ESTESYAAGSPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQ 61

Query: 1053 SQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVPES 874
            ++SGARIQLSRN E+FPGT+DRIIM+SG++ +++  ++LIL KL  E + +DG E  P  
Sbjct: 62   AKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRR 121

Query: 873  KIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAEQM 694
            +IRLVVPNSSCGG+IGKGG+ I+S IE+S+A IKISP DN + GL DRLVT++G   EQM
Sbjct: 122  RIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQM 181

Query: 693  RAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYGPNGAGVKYQNNRFPNKLQEDRSSS 514
            RA++LIL KL ED +Y Q+ ++P+ YA  YN +NY PNG+G KYQN++      E+ S++
Sbjct: 182  RAIDLILAKLTEDDHYSQNVHSPYSYAAGYNSVNYAPNGSGGKYQNHK------EEASTT 235

Query: 513  ITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGSQRAIRL 334
            +TIG+ADEH         RNIME++Q++GARIKIS+RGDFMSGT+DRKV+ITG QRAI+ 
Sbjct: 236  VTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQ 295

Query: 333  AESMISRKIDSVTE 292
            AE+MI +K+DS TE
Sbjct: 296  AETMIKQKVDSATE 309


>gb|ESW16249.1| hypothetical protein PHAVU_007G141100g [Phaseolus vulgaris]
          Length = 335

 Score =  364 bits (935), Expect = 4e-98
 Identities = 193/337 (57%), Positives = 246/337 (72%), Gaps = 21/337 (6%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIND 1060
            ME  +S+Y ++    +++ + P   SP  D+EEK T++RFL+SN+ AGSVIGKGGSTI +
Sbjct: 1    MESTESSYVSSPEGPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITE 60

Query: 1059 IQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVP 880
             QSQSGARIQLSRN E+FPGT+DRIIMVSG +++IL AV LILSKLL E + +D  E  P
Sbjct: 61   FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEILTAVGLILSKLLSELHTEDDNEAEP 120

Query: 879  ESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAE 700
            ++K+RL+VPN SCGG+IGKGG+ IRS IEDS+A IKISPQDN Y G +DRLVT+TG L E
Sbjct: 121  KTKVRLIVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGTLEE 180

Query: 699  QMRAVELILLKLVEDQYYHQSGNTPFPY---------------------AVAYNGMNYGP 583
            Q+RA+ELI+ KL ED  Y QS N+PF Y                       AYN +NY P
Sbjct: 181  QIRAIELIVSKLAEDPQYSQSMNSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRP 240

Query: 582  NGAGVKYQNNRFPNKLQEDRSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISER 403
            NGAG K+QN++      E+RS+S+T+G+ADEH         RNI+E+SQ+SGARIKIS+R
Sbjct: 241  NGAGAKFQNSK------EERSNSMTMGVADEHIGLVVGRGGRNIIEISQVSGARIKISDR 294

Query: 402  GDFMSGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 292
            GD++SGT+DRKVTITG+QRAIR AESMI +K+   TE
Sbjct: 295  GDYISGTTDRKVTITGAQRAIRTAESMILQKVAYATE 331


>ref|XP_006398901.1| hypothetical protein EUTSA_v10014068mg [Eutrema salsugineum]
            gi|567170303|ref|XP_006398903.1| hypothetical protein
            EUTSA_v10014068mg [Eutrema salsugineum]
            gi|557099991|gb|ESQ40354.1| hypothetical protein
            EUTSA_v10014068mg [Eutrema salsugineum]
            gi|557099993|gb|ESQ40356.1| hypothetical protein
            EUTSA_v10014068mg [Eutrema salsugineum]
          Length = 313

 Score =  363 bits (933), Expect = 7e-98
 Identities = 181/314 (57%), Positives = 240/314 (76%)
 Frame = -3

Query: 1233 ENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTINDIQ 1054
            E+  +Y+AASPE    +SP    S   D+ EK TH+RFL+SNA AGSVIGKGGSTI + Q
Sbjct: 2    ESTESYAAASPEELTKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQ 61

Query: 1053 SQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVPES 874
            ++SGARIQLSRN E+FPGT+DRIIM+SG++ +++  ++LIL KL  E + +DG +  P  
Sbjct: 62   AKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNDVEPRR 121

Query: 873  KIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAEQM 694
            +IRLVVPNSSCGG+IGKGG+ I+S IE+S+A IKISP DN Y GL DRLVT++G   EQM
Sbjct: 122  RIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQM 181

Query: 693  RAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYGPNGAGVKYQNNRFPNKLQEDRSSS 514
            RA++LIL KL  D +Y Q+ ++P+ YA  YN +NY PNG+G KYQN++      E+ S++
Sbjct: 182  RAIDLILAKLTSDDHYSQNVHSPYSYAAGYNSVNYAPNGSGGKYQNHK------EEASTT 235

Query: 513  ITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGSQRAIRL 334
             TIG++DEH         RNIME++Q++GARIKIS+RGDFMSGT+DRKV+ITGSQRAI+ 
Sbjct: 236  KTIGVSDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQ 295

Query: 333  AESMISRKIDSVTE 292
            AE+MI +K+DS +E
Sbjct: 296  AETMIKQKVDSASE 309


>ref|XP_006379516.1| hypothetical protein POPTR_0008s03070g [Populus trichocarpa]
            gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
            gi|550332310|gb|ERP57313.1| hypothetical protein
            POPTR_0008s03070g [Populus trichocarpa]
          Length = 313

 Score =  363 bits (931), Expect = 1e-97
 Identities = 186/316 (58%), Positives = 239/316 (75%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIND 1060
            ME  +S+Y  +SPE  + +SPP  +SP  D  EK T+++ L+SNA AGSVIGKGG+TI D
Sbjct: 1    MESTESSY-VSSPEQPRKKSPPPPASPLSDAVEKPTYIKLLVSNAAAGSVIGKGGATITD 59

Query: 1059 IQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVP 880
             QSQSGARIQLS+N+E+FPGTSDRII++SG +DD LKA++LI++KLL E   +DG +  P
Sbjct: 60   FQSQSGARIQLSKNYEFFPGTSDRIILISGGIDDALKALELIIAKLLSEIPTEDGDDAEP 119

Query: 879  ESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAE 700
              ++RLVVPN++CG +IGKGGSII+S IE+S A IKISP D  + GL DRLV +TG L E
Sbjct: 120  RMRVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLDTDFLGLTDRLVAITGTLEE 179

Query: 699  QMRAVELILLKLVEDQYYHQSGNTPFPYAVAYNGMNYGPNGAGVKYQNNRFPNKLQEDRS 520
            QM A++LIL KL +D +Y Q+ + P  YA AYN  N+G NGAGVK+Q+N+      EDR+
Sbjct: 180  QMHAIDLILSKLTDDTHYLQNMHAPLSYAAAYNSTNHGLNGAGVKFQHNK------EDRT 233

Query: 519  SSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFMSGTSDRKVTITGSQRAI 340
            +S+TIG+ADEH         RNIME+SQ SGARIKIS+RGDFMSGT+DRK+TITGSQRAI
Sbjct: 234  NSVTIGVADEHIGLVVGRGGRNIMEISQNSGARIKISDRGDFMSGTNDRKITITGSQRAI 293

Query: 339  RLAESMISRKIDSVTE 292
              AE MI +K+   +E
Sbjct: 294  HAAEDMIMQKVSYASE 309


>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
          Length = 332

 Score =  361 bits (927), Expect = 3e-97
 Identities = 195/333 (58%), Positives = 246/333 (73%), Gaps = 17/333 (5%)
 Frame = -3

Query: 1239 MEENKSAYSAASPEVQQNQSPPRESSPPPDNEEKVTHLRFLLSNAEAGSVIGKGGSTIND 1060
            ME  +S+Y ++    +++ + P   SP  D+EEK T++RFL+SN+ AGSVIGKGGSTI D
Sbjct: 1    MESTESSYVSSPEGPRKHAASPPPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITD 60

Query: 1059 IQSQSGARIQLSRNFEYFPGTSDRIIMVSGTVDDILKAVDLILSKLLDEFYVQDGGETVP 880
             QSQSGARIQLSRN E+FPGT+DRIIMVSG +++I +AV+LILSKLL E + +D  +  P
Sbjct: 61   FQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEP 120

Query: 879  ESKIRLVVPNSSCGGLIGKGGSIIRSLIEDSRASIKISPQDNYYPGLHDRLVTVTGALAE 700
            ++K+RLVVPN SCGG+IGKGG+ IRS IEDS+A IKISPQDN Y G +DRLVT+TG+  E
Sbjct: 121  KTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDE 180

Query: 699  QMRAVELILLKLVEDQYYHQSGNTPFPY----------------AVAYNGMNYGPNG-AG 571
            QMRA+ELI+ KL ED +Y QS N+PF Y                  AYN +NY PNG AG
Sbjct: 181  QMRAIELIVSKLSEDPHYAQSMNSPFSYPGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAG 240

Query: 570  VKYQNNRFPNKLQEDRSSSITIGIADEHXXXXXXXXXRNIMEMSQLSGARIKISERGDFM 391
             K QN++      E+RS+S+T+G+ADEH         RNIME+SQ SGARIKIS+RGD++
Sbjct: 241  GKLQNSK------EERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYV 294

Query: 390  SGTSDRKVTITGSQRAIRLAESMISRKIDSVTE 292
            SGT+DRKVTITGSQRAIR AESMI +K+   TE
Sbjct: 295  SGTTDRKVTITGSQRAIRTAESMILQKVAYATE 327