BLASTX nr result
ID: Rehmannia25_contig00023029
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00023029
(630 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea] 225 9e-57
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 224 2e-56
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 223 5e-56
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras... 220 3e-55
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras... 217 3e-54
ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast ... 187 3e-45
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 183 4e-44
gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus pe... 180 3e-43
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 180 3e-43
emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera] 179 6e-43
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 178 1e-42
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea] 174 2e-41
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 174 2e-41
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [... 171 2e-40
gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3... 169 6e-40
gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1... 169 6e-40
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch... 164 2e-38
ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citr... 164 3e-38
ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citr... 164 3e-38
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu... 162 6e-38
>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
Length = 952
Score = 225 bits (573), Expect = 9e-57
Identities = 120/205 (58%), Positives = 140/205 (68%), Gaps = 2/205 (0%)
Frame = -1
Query: 609 SSSFPQTLKXXXXXXXXXXXXXXXXXXXXDNFPKNPEKLLNLQVMPNG-LRSSLTKESGD 433
SSSFP+ +K DNF +NP L + V PNG + S +KE D
Sbjct: 16 SSSFPRNVKLPSLHTPAPFLSHPVSDSSDDNFTENPGNLATMLVTPNGGISSEFSKELRD 75
Query: 432 RV-FIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMERRKYYLLRRRQIKAETEAWXXXX 256
RV IQDPPWISSL++KSLLFR RNR VK+EFKEMER KYY LRRRQIKAETEAW
Sbjct: 76 RVVIIQDPPWISSLYIKSLLFRNRNRCDVKIEFKEMERHKYYELRRRQIKAETEAWENMV 135
Query: 255 XXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDAL 76
+K+APNLP+ KKLMLGWFEPL EAI EQ++Q+ KKN+ AFAPY+D+L
Sbjct: 136 KEYKELEKEMCEKKMAPNLPYFKKLMLGWFEPLTEAIRTEQSLQKPKKNRIAFAPYIDSL 195
Query: 75 PADKMAVIVMHKIMGLLMMGGKEDR 1
P + MAVIVMHKIMGLLMMGGK+DR
Sbjct: 196 PPESMAVIVMHKIMGLLMMGGKQDR 220
>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Solanum tuberosum]
Length = 1015
Score = 224 bits (570), Expect = 2e-56
Identities = 115/204 (56%), Positives = 144/204 (70%), Gaps = 1/204 (0%)
Frame = -1
Query: 609 SSSFPQTLKXXXXXXXXXXXXXXXXXXXXDNFPKNPEKLLNLQVMPNGLRSSLTKESGDR 430
+SSFP+TLK +N +N E+L+NLQ +PNG L KES R
Sbjct: 79 TSSFPKTLKLPVIQLPITVHSEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQKESNKR 138
Query: 429 VFIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMERRKYY-LLRRRQIKAETEAWXXXXX 253
VFIQDPPW+SSLFM SL R + GV+ EF+E+ERR+ Y +LRRRQIKAETEAW
Sbjct: 139 VFIQDPPWVSSLFMNSLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVE 198
Query: 252 XXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALP 73
+KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + ++K++ A+AP++D+LP
Sbjct: 199 EYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAEMTQKHRTAYAPHIDSLP 258
Query: 72 ADKMAVIVMHKIMGLLMMGGKEDR 1
ADKMAVIVMHK+MGLLMMGGKE+R
Sbjct: 259 ADKMAVIVMHKLMGLLMMGGKEER 282
>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Solanum lycopersicum]
Length = 1007
Score = 223 bits (567), Expect = 5e-56
Identities = 114/204 (55%), Positives = 144/204 (70%), Gaps = 1/204 (0%)
Frame = -1
Query: 609 SSSFPQTLKXXXXXXXXXXXXXXXXXXXXDNFPKNPEKLLNLQVMPNGLRSSLTKESGDR 430
+SSFP+TLK +N +N E+L+NLQ +PNG L KES R
Sbjct: 71 TSSFPKTLKLPIIQLPITVHSEVVCVSTDENLTENLEELVNLQKIPNGYPLVLQKESNKR 130
Query: 429 VFIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMERRKYY-LLRRRQIKAETEAWXXXXX 253
VFIQDPPW+SSLFM +L R + GV+ EF+E+ERR+ Y +LRRRQIKAETEAW
Sbjct: 131 VFIQDPPWVSSLFMNNLFVRAKQVKGVRREFREIERRRRYAMLRRRQIKAETEAWEQMVE 190
Query: 252 XXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALP 73
+KLAPNLP+VKKLMLGWFEPLR+AIE+EQN + ++K++ A+AP++D+LP
Sbjct: 191 EYRELEREMCEKKLAPNLPYVKKLMLGWFEPLRQAIEREQNAEMTQKHRTAYAPHIDSLP 250
Query: 72 ADKMAVIVMHKIMGLLMMGGKEDR 1
ADKMAVIVMHK+MGLLMMGGKE+R
Sbjct: 251 ADKMAVIVMHKLMGLLMMGGKEER 274
>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic;
AltName: Full=NictaRpoT3-tom; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3B;
Flags: Precursor gi|21425667|emb|CAC95021.2| chloroplast
RNA polymerase [Nicotiana tabacum]
Length = 977
Score = 220 bits (560), Expect = 3e-55
Identities = 119/211 (56%), Positives = 146/211 (69%), Gaps = 1/211 (0%)
Frame = -1
Query: 630 SQMPQRSSSSFPQTLKXXXXXXXXXXXXXXXXXXXXDNFPKNPEKLLNLQVMPNGLRSSL 451
SQ S+SSFP+TLK + +N E+L+NLQ +PNG L
Sbjct: 38 SQSSSLSTSSFPKTLKLPVIHMPINNIQSQTTVCVSTD--ENLEELVNLQKIPNGF---L 92
Query: 450 TKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMERRKYY-LLRRRQIKAETE 274
KES RVFIQDPPW+SSLFM SL R + GV+ EF+E+ERR+ Y +LRRRQIKAETE
Sbjct: 93 NKESNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETE 152
Query: 273 AWXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFA 94
AW +KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + + K++AAFA
Sbjct: 153 AWEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFA 212
Query: 93 PYVDALPADKMAVIVMHKIMGLLMMGGKEDR 1
P++D+LPADKMAVIVMHK+MGLLMMGGKE+R
Sbjct: 213 PHIDSLPADKMAVIVMHKLMGLLMMGGKEER 243
>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic;
AltName: Full=NsRpoT-C; AltName: Full=T7
bacteriophage-type single subunit RNA polymerase 3;
Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC
RecName: Full=DNA-directed RNA polymerase 3A,
chloroplastic; AltName: Full=NictaRpoT3-syl; AltName:
Full=T7 bacteriophage-type single subunit RNA polymerase
3A; Flags: Precursor gi|21425641|emb|CAC82576.3|
phage-type RNA polymerase [Nicotiana sylvestris]
gi|21425679|emb|CAC95027.2| plastid RNA polymerase
[Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 977
Score = 217 bits (552), Expect = 3e-54
Identities = 118/211 (55%), Positives = 145/211 (68%), Gaps = 1/211 (0%)
Frame = -1
Query: 630 SQMPQRSSSSFPQTLKXXXXXXXXXXXXXXXXXXXXDNFPKNPEKLLNLQVMPNGLRSSL 451
SQ +SSFP+TLK +N E+L+NLQ + NG+ L
Sbjct: 38 SQSSSLPTSSFPKTLKLPVIQMPINNNIQSQTTVCVST-DENLEELVNLQKIANGV---L 93
Query: 450 TKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMERRKYY-LLRRRQIKAETE 274
TKES RVFIQDPPW+SSLFM SL R + GV+ EF+E+ERR+ Y +LRRRQIKAETE
Sbjct: 94 TKESNKRVFIQDPPWVSSLFMNSLFVRAKQVQGVRREFREIERRRRYAMLRRRQIKAETE 153
Query: 273 AWXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFA 94
AW +KLAPNLP+VKKL+LGWFEPLR+AIEKEQN + + K++AAFA
Sbjct: 154 AWEQMVEEYRELEREMCEKKLAPNLPYVKKLLLGWFEPLRQAIEKEQNAETTVKHRAAFA 213
Query: 93 PYVDALPADKMAVIVMHKIMGLLMMGGKEDR 1
P++D+LPADKMAVIVMHK+MGLLMMGGKE+R
Sbjct: 214 PHIDSLPADKMAVIVMHKLMGLLMMGGKEER 244
>ref|XP_002528405.1| DNA-directed RNA polymerase 3B, chloroplast precursor, putative
[Ricinus communis] gi|223532193|gb|EEF33998.1|
DNA-directed RNA polymerase 3B, chloroplast precursor,
putative [Ricinus communis]
Length = 1000
Score = 187 bits (474), Expect = 3e-45
Identities = 107/209 (51%), Positives = 133/209 (63%), Gaps = 7/209 (3%)
Frame = -1
Query: 612 SSSSFPQTLKXXXXXXXXXXXXXXXXXXXXDNFPKNP-------EKLLNLQVMPNGLRSS 454
SSSSFP K ++ +NP E L+ L + N
Sbjct: 46 SSSSFPLITKFPRNLLPFHPLHDAVEEHLLEDLVENPIGNHQKLETLIKLDLPTNHNHQV 105
Query: 453 LTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMERRKYYLLRRRQIKAETE 274
L +ES RVFIQDPPWIS+LF K L ++ N+ VKLEFK++E+RKY LLRRRQI+ ETE
Sbjct: 106 LPEESSRRVFIQDPPWISALFFKGL-YKIPNKE-VKLEFKDIEKRKYNLLRRRQIREETE 163
Query: 273 AWXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFA 94
AW RKLAPNLP+VK L LGWFEPL+E I+ EQN+QRSKKNKAAFA
Sbjct: 164 AWERMVEEYKALVKEMCERKLAPNLPYVKGLFLGWFEPLKEGIKSEQNLQRSKKNKAAFA 223
Query: 93 PYVDALPADKMAVIVMHKIMGLLMMGGKE 7
P+++ LPADKMAVIVMHK++GLLM+G ++
Sbjct: 224 PHIELLPADKMAVIVMHKMVGLLMVGHED 252
>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 183 bits (464), Expect = 4e-44
Identities = 96/171 (56%), Positives = 119/171 (69%)
Frame = -1
Query: 519 NFPKNPEKLLNLQVMPNGLRSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLE 340
NF + + +NLQ+ + + ES R+FIQDPPWI+SLF+K L + VKLE
Sbjct: 74 NFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGLYKCVQKE--VKLE 131
Query: 339 FKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEP 160
F E+E+RKY LLRRRQIKAETEAW +KLAPNLP+VKKL LGWFEP
Sbjct: 132 FMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEP 191
Query: 159 LREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKE 7
L+ AIE+EQ QRSKK KAAFAP+++ L ADKMAVIVM+K+MGLLMM ++
Sbjct: 192 LKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAVIVMYKMMGLLMMAAQD 242
>gb|EMJ04424.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
Length = 976
Score = 180 bits (457), Expect = 3e-43
Identities = 91/165 (55%), Positives = 116/165 (70%)
Frame = -1
Query: 501 EKLLNLQVMPNGLRSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMER 322
E +N Q+ + +ES R+FIQDPPWI+SLF+K + R +KLE KE+ER
Sbjct: 79 ENSMNFQIPMSEFHLITPQESAPRIFIQDPPWIASLFLKGIYKRANQE--LKLESKEIER 136
Query: 321 RKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIE 142
R Y +LRRRQIKAETEAW +KLAPNLP+VK L LGWFEPLREAI
Sbjct: 137 RNYNVLRRRQIKAETEAWERMVDEYKDLEKVMREKKLAPNLPYVKALFLGWFEPLREAIA 196
Query: 141 KEQNVQRSKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKE 7
+EQ Q++KK+KAAFAP++D LPADKMA+IVMHK+MGL+M+G ++
Sbjct: 197 REQKTQQTKKHKAAFAPHIDLLPADKMALIVMHKMMGLVMVGNQD 241
>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Cucumis sativus]
Length = 975
Score = 180 bits (457), Expect = 3e-43
Identities = 95/171 (55%), Positives = 118/171 (69%)
Frame = -1
Query: 519 NFPKNPEKLLNLQVMPNGLRSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLE 340
NF + + +NLQ+ + + ES R+FIQDPPWI+SLF+K L + VKLE
Sbjct: 74 NFTETLDNSMNLQIPISEIHQITRGESSKRIFIQDPPWIASLFLKGLYKCVQKE--VKLE 131
Query: 339 FKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEP 160
F E+E+RKY LLRRRQIKAETEAW +KLAPNLP+VKKL LGWFEP
Sbjct: 132 FMEIEKRKYNLLRRRQIKAETEAWEKMVEEYKELEREMCEKKLAPNLPYVKKLFLGWFEP 191
Query: 159 LREAIEKEQNVQRSKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKE 7
L+ AIE+EQ QRSKK KAAFAP+++ L ADKMA IVM+K+MGLLMM ++
Sbjct: 192 LKNAIEEEQKTQRSKKQKAAFAPHIELLSADKMAGIVMYKMMGLLMMAAQD 242
>emb|CAN65186.1| hypothetical protein VITISV_023905 [Vitis vinifera]
Length = 1312
Score = 179 bits (454), Expect = 6e-43
Identities = 92/148 (62%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Frame = -1
Query: 447 KESGDRVFIQDPPWISSLFMKSLLFRGRNRS-GVKLEFKEMERRKYYLLRRRQIKAETEA 271
KES R+F+QDPPWISS R R VKLEF+E ERR Y LLRRRQ+KAETEA
Sbjct: 98 KESIPRIFVQDPPWISSFLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEA 157
Query: 270 WXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 91
W +KLAPNLP+VK L LGWFEPLREAIEKEQ QR+KK KAA+AP
Sbjct: 158 WERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIEKEQRAQRTKKQKAAYAP 217
Query: 90 YVDALPADKMAVIVMHKIMGLLMMGGKE 7
+++ LPADKMAVIVMHK+MGL+MMG +E
Sbjct: 218 HIELLPADKMAVIVMHKMMGLVMMGHEE 245
>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
vinifera]
Length = 979
Score = 178 bits (451), Expect = 1e-42
Identities = 91/148 (61%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Frame = -1
Query: 447 KESGDRVFIQDPPWISSLFMKSLLFRGRNRS-GVKLEFKEMERRKYYLLRRRQIKAETEA 271
KES R+F+QDPPWISS R R VKLEF+E ERR Y LLRRRQ+KAETEA
Sbjct: 98 KESIPRIFVQDPPWISSFLFHDWCERNRRTGQNVKLEFRETERRNYGLLRRRQVKAETEA 157
Query: 270 WXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAP 91
W +KLAPNLP+VK L LGWFEPLREAI+KEQ QR+KK KAA+AP
Sbjct: 158 WERMVEEYREIEREMCEKKLAPNLPYVKALFLGWFEPLREAIDKEQRAQRTKKQKAAYAP 217
Query: 90 YVDALPADKMAVIVMHKIMGLLMMGGKE 7
+++ LPADKMAVIVMHK+MGL+MMG +E
Sbjct: 218 HIELLPADKMAVIVMHKMMGLVMMGHEE 245
>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
Length = 989
Score = 174 bits (441), Expect = 2e-41
Identities = 97/199 (48%), Positives = 123/199 (61%)
Frame = -1
Query: 612 SSSSFPQTLKXXXXXXXXXXXXXXXXXXXXDNFPKNPEKLLNLQVMPNGLRSSLTKESGD 433
SS+SFP TL +PE+ L + M R+S +
Sbjct: 59 SSNSFPSTLSLPSLTPKLGKTSFFQPSPQSQIILDSPEEEL-AEKMDGHFRNSDKIKGSS 117
Query: 432 RVFIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMERRKYYLLRRRQIKAETEAWXXXXX 253
R+F+QDPPW+++LFMK L+ + +G++LEFKE+ER KY LLRRRQIKAETEAW
Sbjct: 118 RIFMQDPPWVNTLFMKGLV---DSNTGLRLEFKEIEREKYNLLRRRQIKAETEAWESMVE 174
Query: 252 XXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDALP 73
+KLAPNLP VK L LGWFEPL++AIEKEQ QRS+K KA + ++D LP
Sbjct: 175 EYREFVREMRDKKLAPNLPQVKALFLGWFEPLKKAIEKEQKSQRSRKQKAIYGYHIDMLP 234
Query: 72 ADKMAVIVMHKIMGLLMMG 16
ADKMAVIVMHK+M LLM+G
Sbjct: 235 ADKMAVIVMHKMMSLLMVG 253
>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 973
Score = 174 bits (440), Expect = 2e-41
Identities = 88/145 (60%), Positives = 111/145 (76%)
Frame = -1
Query: 441 SGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMERRKYYLLRRRQIKAETEAWXX 262
S R+FIQDPPWI+SLF+K + F+ N+ +K+E KE++RRKY LLRRRQIKAETEAW
Sbjct: 96 SEPRIFIQDPPWIASLFLKGM-FKKVNKE-LKVESKEIDRRKYNLLRRRQIKAETEAWEK 153
Query: 261 XXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVD 82
+KLAP+LP+VK L LGWFEPLREAI KEQ Q++KK+K AFAP++D
Sbjct: 154 MVEDYKDLERVMREKKLAPSLPYVKALFLGWFEPLREAIAKEQKAQQTKKHKQAFAPHID 213
Query: 81 ALPADKMAVIVMHKIMGLLMMGGKE 7
LPADKMA+IVMHK+MGL+MMG ++
Sbjct: 214 LLPADKMALIVMHKLMGLVMMGNQD 238
>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 882
Score = 171 bits (432), Expect = 2e-40
Identities = 87/146 (59%), Positives = 112/146 (76%)
Frame = -1
Query: 444 ESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMERRKYYLLRRRQIKAETEAWX 265
ES +VFIQDPPWIS+ F K + ++ N+ VK+EFK++E+RKY LLRRRQI+ ETEAW
Sbjct: 4 ESSKKVFIQDPPWISAHFWKGM-YKLANKK-VKVEFKDIEKRKYNLLRRRQIREETEAWE 61
Query: 264 XXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYV 85
RKLAPNLP+VK L+LGWFEPL+EAIEKEQ +++SKK K+AF+P +
Sbjct: 62 RMADEYRGLVREMCERKLAPNLPYVKGLLLGWFEPLKEAIEKEQKMEKSKKQKSAFSPNI 121
Query: 84 DALPADKMAVIVMHKIMGLLMMGGKE 7
+ LPADKMAVIVMHK+MGLLM+G ++
Sbjct: 122 ELLPADKMAVIVMHKMMGLLMVGHED 147
>gb|EOY31498.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
Length = 927
Score = 169 bits (428), Expect = 6e-40
Identities = 94/174 (54%), Positives = 122/174 (70%), Gaps = 2/174 (1%)
Frame = -1
Query: 519 NFPKNPEKLLNLQVMPNGLRSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLE 340
NF +N E N + L+ ES R+FIQDPPWIS+LF+K L ++ N++ VK+E
Sbjct: 74 NFVENIENPSNFLLPKAQSHQILSPESTPRLFIQDPPWISALFLKGL-YKMTNQT-VKIE 131
Query: 339 FKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEP 160
KE+E+RKY LLRRRQ+K ETEAW +KLAPNLP+VK L LGWFEP
Sbjct: 132 HKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEP 191
Query: 159 LREAIEKEQNVQ--RSKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKED 4
+REAI +EQ VQ +SKK +AA+AP+++ LPADKMAVIVMHK+MG L+MG +E+
Sbjct: 192 MREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMG-LVMGAQEN 244
>gb|EOY31496.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
Length = 978
Score = 169 bits (428), Expect = 6e-40
Identities = 94/174 (54%), Positives = 122/174 (70%), Gaps = 2/174 (1%)
Frame = -1
Query: 519 NFPKNPEKLLNLQVMPNGLRSSLTKESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLE 340
NF +N E N + L+ ES R+FIQDPPWIS+LF+K L ++ N++ VK+E
Sbjct: 74 NFVENIENPSNFLLPKAQSHQILSPESTPRLFIQDPPWISALFLKGL-YKMTNQT-VKIE 131
Query: 339 FKEMERRKYYLLRRRQIKAETEAWXXXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEP 160
KE+E+RKY LLRRRQ+K ETEAW +KLAPNLP+VK L LGWFEP
Sbjct: 132 HKEIEKRKYNLLRRRQVKEETEAWEKMVEEYRELQREMCEKKLAPNLPYVKGLFLGWFEP 191
Query: 159 LREAIEKEQNVQ--RSKKNKAAFAPYVDALPADKMAVIVMHKIMGLLMMGGKED 4
+REAI +EQ VQ +SKK +AA+AP+++ LPADKMAVIVMHK+MG L+MG +E+
Sbjct: 192 MREAIAREQKVQKGKSKKLRAAYAPHIELLPADKMAVIVMHKMMG-LVMGAQEN 244
>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
[Citrus sinensis]
Length = 1009
Score = 164 bits (416), Expect = 2e-38
Identities = 83/145 (57%), Positives = 107/145 (73%), Gaps = 1/145 (0%)
Frame = -1
Query: 432 RVFIQDPPWISSLFMKSLLFRGRNRSGVKL-EFKEMERRKYYLLRRRQIKAETEAWXXXX 256
R+F+QDPPW SS+F+K L R +KL E++EM++RK+ LLRRRQ+K ETEAW
Sbjct: 138 RIFVQDPPWFSSIFLKGLYKR------IKLQEYREMKKRKFNLLRRRQVKQETEAWERMV 191
Query: 255 XXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDAL 76
++LAPNLPH+K L LGWF PLREAIE+EQ +QR+KK KAA+AP+++ L
Sbjct: 192 DEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLREAIEREQKMQRTKKQKAAYAPHIELL 251
Query: 75 PADKMAVIVMHKIMGLLMMGGKEDR 1
PADK+AVIVMHK+MG L+M G EDR
Sbjct: 252 PADKVAVIVMHKMMG-LVMAGHEDR 275
>ref|XP_006453567.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
gi|557556793|gb|ESR66807.1| hypothetical protein
CICLE_v10007333mg [Citrus clementina]
Length = 986
Score = 164 bits (414), Expect = 3e-38
Identities = 83/145 (57%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
Frame = -1
Query: 432 RVFIQDPPWISSLFMKSLLFRGRNRSGVKL-EFKEMERRKYYLLRRRQIKAETEAWXXXX 256
R+F+QDPPW SS+F+K L R +KL E++EM++RK+ LLRRRQ+K ETEAW
Sbjct: 141 RIFVQDPPWFSSIFLKGLYKR------IKLQEYREMKKRKFNLLRRRQVKQETEAWERMV 194
Query: 255 XXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDAL 76
++LAPNLPH+K L LGWF PL EAIE+EQ +QR+KK KAA+AP+++ L
Sbjct: 195 DEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELL 254
Query: 75 PADKMAVIVMHKIMGLLMMGGKEDR 1
PADKMAVIVMHK+MG L+M G EDR
Sbjct: 255 PADKMAVIVMHKMMG-LVMAGHEDR 278
>ref|XP_006453566.1| hypothetical protein CICLE_v10007333mg [Citrus clementina]
gi|557556792|gb|ESR66806.1| hypothetical protein
CICLE_v10007333mg [Citrus clementina]
Length = 1012
Score = 164 bits (414), Expect = 3e-38
Identities = 83/145 (57%), Positives = 106/145 (73%), Gaps = 1/145 (0%)
Frame = -1
Query: 432 RVFIQDPPWISSLFMKSLLFRGRNRSGVKL-EFKEMERRKYYLLRRRQIKAETEAWXXXX 256
R+F+QDPPW SS+F+K L R +KL E++EM++RK+ LLRRRQ+K ETEAW
Sbjct: 141 RIFVQDPPWFSSIFLKGLYKR------IKLQEYREMKKRKFNLLRRRQVKQETEAWERMV 194
Query: 255 XXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYVDAL 76
++LAPNLPH+K L LGWF PL EAIE+EQ +QR+KK KAA+AP+++ L
Sbjct: 195 DEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELL 254
Query: 75 PADKMAVIVMHKIMGLLMMGGKEDR 1
PADKMAVIVMHK+MG L+M G EDR
Sbjct: 255 PADKMAVIVMHKMMG-LVMAGHEDR 278
>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
gi|222854390|gb|EEE91937.1| hypothetical protein
POPTR_0006s19490g [Populus trichocarpa]
Length = 982
Score = 162 bits (411), Expect = 6e-38
Identities = 83/146 (56%), Positives = 106/146 (72%)
Frame = -1
Query: 444 ESGDRVFIQDPPWISSLFMKSLLFRGRNRSGVKLEFKEMERRKYYLLRRRQIKAETEAWX 265
ES RVFI+D PWIS+L+ K + VKLE K++E+RKY LLRRRQI+ ETEAW
Sbjct: 104 ESSKRVFIRDSPWISALYWKGTHKIANKK--VKLELKDIEKRKYNLLRRRQIREETEAWE 161
Query: 264 XXXXXXXXXXXXXXXRKLAPNLPHVKKLMLGWFEPLREAIEKEQNVQRSKKNKAAFAPYV 85
RKLAPNLP+VK L LGWFEPL+EAIE+EQ +++SKK K+AF+P +
Sbjct: 162 RMAEEYTGLVKEMCERKLAPNLPYVKSLFLGWFEPLKEAIEREQKLEKSKKQKSAFSPNI 221
Query: 84 DALPADKMAVIVMHKIMGLLMMGGKE 7
+ LPADKMAVIVMHK+MGL+M+G ++
Sbjct: 222 ELLPADKMAVIVMHKMMGLVMVGHED 247