BLASTX nr result
ID: Rehmannia25_contig00022952
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia25_contig00022952
(341 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 69 6e-10
gb|AAK29467.1| polyprotein-like [Solanum chilense] 69 8e-10
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 66 5e-09
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 66 5e-09
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 65 7e-09
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 65 7e-09
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 65 7e-09
emb|CAN71038.1| hypothetical protein VITISV_011062 [Vitis vinifera] 65 9e-09
emb|CAN69974.1| hypothetical protein VITISV_014388 [Vitis vinifera] 65 9e-09
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 65 1e-08
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 64 2e-08
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 64 2e-08
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 64 2e-08
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 64 2e-08
emb|CAN77765.1| hypothetical protein VITISV_021568 [Vitis vinifera] 64 2e-08
ref|XP_004247549.1| PREDICTED: putative E3 ubiquitin-protein lig... 64 3e-08
emb|CAN80650.1| hypothetical protein VITISV_022906 [Vitis vinifera] 64 3e-08
emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera] 64 3e-08
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 63 4e-08
gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subc... 63 4e-08
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVW 42
MNRT++EKVRSML +++L K FW E QTA Y IN SPSVPL + PE VW
Sbjct: 588 MNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVW 638
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 68.6 bits (166), Expect = 8e-10
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVW 42
MNRT++EKVRSML +++L K FW E +TA Y IN SPSVPLE PE VW
Sbjct: 589 MNRTIVEKVRSMLRMAKLPKTFWGEAVRTACYLINRSPSVPLEFDIPERVW 639
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGI 33
MNRT++ K R ML+ +R++K+FW E TA Y IN SPS+PL K P EVW G+
Sbjct: 520 MNRTIISKARCMLSNARMNKRFWAEAANTACYLINKSPSIPLNKKTPIEVWSGM 573
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 65.9 bits (159), Expect = 5e-09
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGI 33
MNRT++ K R ML+ +R++K+FW E TA Y IN SPS+PL K P EVW G+
Sbjct: 592 MNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGM 645
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGI 33
MNRT++ K R ML+ +R++K+FW E TA Y IN SPS+PL K P E+W G+
Sbjct: 592 MNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEIWSGM 645
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/57 (50%), Positives = 42/57 (73%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGINLK 24
MNRTL+E+VR ML+ ++L K FW E TA + IN+SP++ L A+ P++VW G N+K
Sbjct: 580 MNRTLIERVRCMLSKAKLPKHFWGEALYTAVHVINLSPAIALNAEVPDKVWFGKNVK 636
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGI 33
MNRT++ K R ML+ +R++K+FW E TA Y IN SPS+PL K P E+W G+
Sbjct: 592 MNRTIISKARCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEIWSGM 645
>emb|CAN71038.1| hypothetical protein VITISV_011062 [Vitis vinifera]
Length = 646
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGINLK 24
MNRTL E+ RSM + L K FW + TATY IN PSVP+E + PEEVW G +K
Sbjct: 54 MNRTLNERARSMRLHAGLPKTFWADAISTATYLINRGPSVPMEFRLPEEVWSGKEVK 110
>emb|CAN69974.1| hypothetical protein VITISV_014388 [Vitis vinifera]
Length = 1058
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGINLK 24
MNRTL E+ RSM +RL K FW + TA Y IN PS+P+E + PEEVW G +K
Sbjct: 443 MNRTLNERARSMRLHARLPKTFWADAVSTAAYLINRGPSIPMEFRLPEEVWSGKEVK 499
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGI 33
MNRT++ + R ML+ +R++K+FW E TA Y IN SPS+PL K P EVW G+
Sbjct: 591 MNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGM 644
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCG 36
MNRT++ + R ML+ +R++K+FW E TA Y IN SPS+PL K P EVW G
Sbjct: 591 MNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSG 643
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCG 36
MNRT++ + R ML+ +R++K+FW E TA Y IN SPS+PL K P EVW G
Sbjct: 591 MNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSG 643
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGIN 30
MNRT++ K ML+ +R++K+FW E TA Y IN SPS+PL K P EVW G++
Sbjct: 329 MNRTIISKAHCMLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGMS 383
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCG 36
MNRT++ + R ML+ +R++K+FW E TA Y IN SPS+PL K P EVW G
Sbjct: 593 MNRTIISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSG 645
>emb|CAN77765.1| hypothetical protein VITISV_021568 [Vitis vinifera]
Length = 611
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGINLK 24
MNRTL E+ RSM + L K FW + TA Y IN PSVP+E K PEEVW G +K
Sbjct: 500 MNRTLNERARSMRLHAGLPKTFWADAVSTAAYLINRGPSVPMEFKLPEEVWSGKEVK 556
>ref|XP_004247549.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Solanum
lycopersicum]
Length = 957
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCG 36
MNRTL+E+VR ML+ ++LS FW E TA Y IN+SP+V L+ P+ VW G
Sbjct: 1 MNRTLVERVRCMLSDAKLSNSFWAEALNTAAYVINLSPAVALDGDVPDRVWTG 53
>emb|CAN80650.1| hypothetical protein VITISV_022906 [Vitis vinifera]
Length = 1091
Score = 63.5 bits (153), Expect = 3e-08
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGINLK 24
MNRTL E+ RSM+ + L K FW + TA Y IN PSVP+E + PEEVW G +K
Sbjct: 421 MNRTLNERARSMMLHAGLPKTFWVDAVSTAAYLINRGPSVPIEFRLPEEVWSGKEVK 477
>emb|CAN65504.1| hypothetical protein VITISV_028342 [Vitis vinifera]
Length = 1252
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/57 (50%), Positives = 36/57 (63%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGINLK 24
MNRTL E+ RSM + L K FW + TA Y IN PS+P+E + PEEVW G +K
Sbjct: 350 MNRTLNERARSMRLHAGLPKNFWADAISTAAYLINRGPSIPMEFRLPEEVWSGKEMK 406
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCG 36
MNRTL+E+ R +L+ S+L K FW E TA Y +N SP VPL+ K PE++W G
Sbjct: 585 MNRTLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLG 637
>gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1136
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = -1
Query: 194 MNRTLLEKVRSMLAISRLSKKFWREGFQTATYWINMSPSVPLEAKYPEEVWCGI 33
MNRT++ + R +L+ +R++K+FW E TA Y IN SPS+PL K P EVW G+
Sbjct: 384 MNRTIISEARCLLSNARMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGM 437