BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia25_contig00022786
         (333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containi...   106   4e-21
ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containi...   105   8e-21
gb|EPS64936.1| hypothetical protein M569_09839, partial [Genlise...    99   6e-19
gb|EOY31499.1| Tetratricopeptide repeat (TPR)-like superfamily p...    93   3e-17
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi...    92   9e-17
ref|XP_004287149.1| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_006474045.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
ref|XP_006453565.1| hypothetical protein CICLE_v10007430mg [Citr...    84   2e-14
ref|XP_006285536.1| hypothetical protein CARUB_v10006977mg [Caps...    80   4e-13
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,...    77   2e-12
gb|EXB42922.1| Pentatricopeptide repeat-containing protein [Moru...    77   3e-12
gb|EMJ04907.1| hypothetical protein PRUPE_ppa019391mg, partial [...    77   3e-12
ref|XP_006857035.1| hypothetical protein AMTR_s00065p00020910 [A...    75   1e-11
ref|NP_567856.1| pentatricopeptide repeat-containing protein [Ar...    74   2e-11
emb|CAA18211.1| puative protein [Arabidopsis thaliana] gi|726998...    74   2e-11
gb|ESW24614.1| hypothetical protein PHAVU_004G145400g [Phaseolus...    72   8e-11
ref|XP_006412665.1| hypothetical protein EUTSA_v10024344mg [Eutr...    70   3e-10
ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ...    69   6e-10

>ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565353364|ref|XP_006343602.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 937

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   KTVRKNTIRNLDFHRNGNKYKKQEKSMVPLQKNSANPILDGQTKVDLDFNDV--ELSSER 174
           K V +++     F     K   +E  M+    NS   ++D Q  VD    ++  + S ++
Sbjct: 115 KKVPRDSNHRSSFRLKDRKNGMEENPMIAFDVNSDESVIDSQNGVDFPDENIGSDSSLDQ 174

Query: 175 CNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
           CN IL++LE+ ND +ALSFF WM+ NGKLK NVTAYN ILRVLGR+GDWDGAE
Sbjct: 175 CNAILKELERGNDGKALSFFRWMRKNGKLKQNVTAYNLILRVLGRRGDWDGAE 227


>ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Solanum lycopersicum]
          Length = 1201

 Score =  105 bits (261), Expect = 8e-21
 Identities = 53/113 (46%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   KTVRKNTIRNLDFHRNGNKYKKQEKSMVPLQKNSANPILDGQTKVDLDFNDV--ELSSER 174
           K V K++     F     KY  +E   +    NS   ++D Q  VD    ++  + S ++
Sbjct: 379 KKVPKDSNYRSSFRLKDRKYGTEENPRIVFDVNSDENVIDSQNGVDFHDENIGSDSSLDQ 438

Query: 175 CNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
           CN IL++LE+ +D +ALSFF WM+ NGKLK NVTAYN ILRVLGR+GDWDGAE
Sbjct: 439 CNAILKELERGDDGKALSFFRWMRKNGKLKQNVTAYNLILRVLGRRGDWDGAE 491


>gb|EPS64936.1| hypothetical protein M569_09839, partial [Genlisea aurea]
          Length = 865

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   KTVRKNTIRNLDFHRNGNKYKKQEKSMVPLQKNSANPILDGQTKVDLDFNDV--ELSSER 174
           K  R++  ++LD H    K +K   + +  Q+ S+   L  +T + LD  DV  E + ER
Sbjct: 44  KMWREHKKQSLDPHLQSKKSRKVRPTSLQ-QRASSGSALGSETDLCLDSWDVRPEETIER 102

Query: 175 CNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
           CN+ILE+LEKS+DS+A+SFF WM++N KLK NV A+N ILRVL RK DWDGAE
Sbjct: 103 CNMILERLEKSDDSKAISFFKWMRLNQKLKKNVIAHNVILRVLTRKDDWDGAE 155


>gb|EOY31499.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 916

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 48/113 (42%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   KTVRKNTIRNLDFHRNGNKYKKQEKSMVPLQKNSANPILDGQTKVDLDFNDVE--LSSER 174
           K +RKN      F RN N+ ++++              +   + +D+D++ ++  L+   
Sbjct: 106 KGIRKNVGFKFRFRRNRNEIEREDL------------FVHNNSGLDVDYSAIKPNLNLPH 153

Query: 175 CNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
           CN IL++LE+SNDS AL FF+WM+ NGKLK NVTAY  +LRVLGR+ DWD AE
Sbjct: 154 CNFILKRLERSNDSNALRFFEWMRSNGKLKGNVTAYRLVLRVLGRREDWDAAE 206


>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Cucumis sativus]
          Length = 894

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 45/93 (48%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
 Frame = +1

Query: 61  KKQEKSMVPLQKNSANPILDGQTKVDLDFNDV--ELSSERCNLILEQLEKSNDSRALSFF 234
           K+   S     +N  + IL    ++D++++ +  +LS E CN IL++LEK NDS+ L FF
Sbjct: 92  KRAAGSHFSFSRNCNDNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFF 151

Query: 235 DWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
           +WM+ NGKLK+NV+AYN +LRVLGR+ DWD AE
Sbjct: 152 EWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAE 184


>ref|XP_004287149.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 885

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 38/72 (52%), Positives = 54/72 (75%)
 Frame = +1

Query: 118 DGQTKVDLDFNDVELSSERCNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILR 297
           DG+  VD      ++S E CN IL++LE+S+D + L FF+WM++NGKLK NV+A+NS+ R
Sbjct: 104 DGEFDVDYSVIKSDMSLEHCNDILKRLERSSDFKTLKFFEWMRINGKLKGNVSAFNSVFR 163

Query: 298 VLGRKGDWDGAE 333
           VLGR+ +WD AE
Sbjct: 164 VLGRRENWDAAE 175


>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Vitis vinifera]
           gi|297745081|emb|CBI38673.3| unnamed protein product
           [Vitis vinifera]
          Length = 900

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 40/70 (57%), Positives = 53/70 (75%), Gaps = 4/70 (5%)
 Frame = +1

Query: 136 DLDFNDV----ELSSERCNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVL 303
           ++D N+     ELS ERCN IL+ LE+ +DS+ + FF+WM+ NGKL+ NV+AYN  LRVL
Sbjct: 123 EIDVNEYGIGPELSVERCNAILKGLERCSDSKTMKFFEWMRENGKLEGNVSAYNLALRVL 182

Query: 304 GRKGDWDGAE 333
           GR+GDWD AE
Sbjct: 183 GRRGDWDAAE 192


>ref|XP_006474045.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Citrus sinensis]
          Length = 915

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 38/72 (52%), Positives = 52/72 (72%)
 Frame = +1

Query: 118 DGQTKVDLDFNDVELSSERCNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILR 297
           DG+  V+      +LS + CN IL++LEK +DS++L FF+WM+ NGKL+ NVTAYN +LR
Sbjct: 132 DGELDVNYSVIGADLSLDECNAILKRLEKYSDSKSLKFFEWMRTNGKLEKNVTAYNLVLR 191

Query: 298 VLGRKGDWDGAE 333
           V  R+ DWD AE
Sbjct: 192 VFSRREDWDAAE 203


>ref|XP_006453565.1| hypothetical protein CICLE_v10007430mg [Citrus clementina]
           gi|557556791|gb|ESR66805.1| hypothetical protein
           CICLE_v10007430mg [Citrus clementina]
          Length = 851

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 37/72 (51%), Positives = 51/72 (70%)
 Frame = +1

Query: 118 DGQTKVDLDFNDVELSSERCNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILR 297
           DG+  V+      +LS + CN IL++LEK +DS++L FF+WM+ NGKL+ NV AYN +LR
Sbjct: 68  DGELDVNYSVIGADLSLDECNAILKRLEKYSDSKSLKFFEWMRTNGKLEKNVIAYNLVLR 127

Query: 298 VLGRKGDWDGAE 333
           V  R+ DWD AE
Sbjct: 128 VFSRREDWDAAE 139


>ref|XP_006285536.1| hypothetical protein CARUB_v10006977mg [Capsella rubella]
           gi|482554241|gb|EOA18434.1| hypothetical protein
           CARUB_v10006977mg [Capsella rubella]
          Length = 907

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 8/104 (7%)
 Frame = +1

Query: 46  NGNKY--KKQEKSMVPLQKNSAN----PILDGQTKVDLDFNDVE--LSSERCNLILEQLE 201
           +GNK   KK        ++ S N     +L    ++D++++ ++  LS E CN IL++LE
Sbjct: 95  SGNKRGTKKDVVKKFSFRRESINLELEELLVNNGEMDVNYSAIKPTLSLEHCNGILKRLE 154

Query: 202 KSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
             +DS A+ FFDWM  NGKL+ N +AY+ ILRVLGR+ DWD AE
Sbjct: 155 SCSDSNAVKFFDWMSCNGKLQGNFSAYSLILRVLGRRQDWDRAE 198


>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 955

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
 Frame = +1

Query: 121 GQTKVDLDFNDVELSSERCNLILEQLEK-SNDSRALSFFDWMKVNGKLKNNVTAYNSILR 297
           G+  V+       LS E CNLIL++LE+ S+D ++L FF+WM+ NGKL+ N+ AYN ILR
Sbjct: 174 GELDVNYSVIHCNLSLEHCNLILKRLERCSSDDKSLRFFEWMRNNGKLEKNLNAYNVILR 233

Query: 298 VLGRKGDWDGAE 333
           VLGR+ DW  AE
Sbjct: 234 VLGRREDWGTAE 245


>gb|EXB42922.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
          Length = 889

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 34/72 (47%), Positives = 50/72 (69%)
 Frame = +1

Query: 118 DGQTKVDLDFNDVELSSERCNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILR 297
           DG+  V+      +LS E+CN +L++LE  +DS+ L FF+WM+ +GKL+ N++AYN + R
Sbjct: 108 DGEIDVNYSVIRSDLSLEQCNSVLKRLESCSDSKTLRFFEWMRSHGKLEGNISAYNLVFR 167

Query: 298 VLGRKGDWDGAE 333
           VL RK DW  AE
Sbjct: 168 VLSRKEDWGTAE 179


>gb|EMJ04907.1| hypothetical protein PRUPE_ppa019391mg, partial [Prunus persica]
          Length = 766

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 32/55 (58%), Positives = 45/55 (81%)
 Frame = +1

Query: 169 ERCNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
           E CN IL++LE+ +D + L FF+WM+ NGKL+ NV+A+N +LRV+GR+ DWDGAE
Sbjct: 2   EHCNDILKRLERCSDVKTLRFFEWMRSNGKLERNVSAFNLVLRVMGRREDWDGAE 56


>ref|XP_006857035.1| hypothetical protein AMTR_s00065p00020910 [Amborella trichopoda]
           gi|548861118|gb|ERN18502.1| hypothetical protein
           AMTR_s00065p00020910 [Amborella trichopoda]
          Length = 903

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 45/101 (44%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
 Frame = +1

Query: 64  KQEKSMVPLQKNSANPILDGQTKVDLDFNDVEL-----------SSERCNLILEQLEKSN 210
           + E S   L K    P LD +    L   + EL           S E CN  L+ LEKSN
Sbjct: 88  ESEVSARRLAKTEQCPSLDRKDGDSLSSTESELEAKLSTLEPLSSIENCNNYLKLLEKSN 147

Query: 211 DSRALSFFDWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
           D++AL  F+WMK NGKL  N TAYN  LRVL RK DW  +E
Sbjct: 148 DAKALQLFEWMKSNGKLDRNPTAYNLALRVLSRKEDWKASE 188


>ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635625|sp|O65567.2|PP342_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g30825, chloroplastic; Flags: Precursor
           gi|332660415|gb|AEE85815.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/70 (48%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
 Frame = +1

Query: 130 KVDLDFNDVE--LSSERCNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVL 303
           ++D++++ ++   S E CN IL++LE  +D+ A+ FFDWM+ NGKL  N  AY+ ILRVL
Sbjct: 125 EIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVL 184

Query: 304 GRKGDWDGAE 333
           GR+ +WD AE
Sbjct: 185 GRREEWDRAE 194


>emb|CAA18211.1| puative protein [Arabidopsis thaliana] gi|7269983|emb|CAB79800.1|
           puative protein [Arabidopsis thaliana]
          Length = 1075

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/70 (48%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
 Frame = +1

Query: 130 KVDLDFNDVE--LSSERCNLILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVL 303
           ++D++++ ++   S E CN IL++LE  +D+ A+ FFDWM+ NGKL  N  AY+ ILRVL
Sbjct: 296 EIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVL 355

Query: 304 GRKGDWDGAE 333
           GR+ +WD AE
Sbjct: 356 GRREEWDRAE 365


>gb|ESW24614.1| hypothetical protein PHAVU_004G145400g [Phaseolus vulgaris]
          Length = 852

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/68 (52%), Positives = 52/68 (76%), Gaps = 2/68 (2%)
 Frame = +1

Query: 136 DLDFNDVELSSERCNLILEQLEKS--NDSRALSFFDWMKVNGKLKNNVTAYNSILRVLGR 309
           D++F+  ELS+ +CN IL++LE+S  +D+  LSFF+ M+  GKL+ N  AYN ILRV+ R
Sbjct: 75  DVEFSS-ELSTAQCNAILKRLEESAEDDAETLSFFEKMREGGKLERNAGAYNVILRVVSR 133

Query: 310 KGDWDGAE 333
           +GDW+GAE
Sbjct: 134 RGDWEGAE 141


>ref|XP_006412665.1| hypothetical protein EUTSA_v10024344mg [Eutrema salsugineum]
           gi|557113835|gb|ESQ54118.1| hypothetical protein
           EUTSA_v10024344mg [Eutrema salsugineum]
          Length = 916

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/109 (34%), Positives = 60/109 (55%)
 Frame = +1

Query: 7   VRKNTIRNLDFHRNGNKYKKQEKSMVPLQKNSANPILDGQTKVDLDFNDVELSSERCNLI 186
           ++K+  R   F R  N+ + +              + +G+  V+      +LS E  N I
Sbjct: 109 IKKDVTRKSSFRRESNELELEGLF-----------VNNGEMDVNYSAMKPDLSLEHYNGI 157

Query: 187 LEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
           L++LE  +D+ A+ FFDWM+  GKL+ N+ AY+ ILRVL R+ +WD AE
Sbjct: 158 LKRLECCSDTNAVKFFDWMRCKGKLEGNIVAYSLILRVLARREEWDRAE 206


>ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X1 [Glycine max]
           gi|571450583|ref|XP_006578471.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 854

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
 Frame = +1

Query: 55  KYKKQEKSMVPLQKNSANPILDGQTKVDLDFNDVELSSERCNLILEQLEKSNDS--RALS 228
           ++ K + S +P  KN+    L      D+DF+  ELS+E CN IL++LE S  +  + LS
Sbjct: 54  QHPKTKPSYLP--KNTEKQKLFFSRDADVDFSP-ELSTEHCNAILKRLEASAAAADKTLS 110

Query: 229 FFDWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
           FF+ M+  GKL+ N  AYN +LR L R+ DW+GAE
Sbjct: 111 FFERMRATGKLERNAAAYNVMLRFLSRRQDWEGAE 145


>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315195|gb|EFH45618.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 906

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
 Frame = +1

Query: 10  RKNTIRNLDFHRNGNKYKKQEKSMVPLQKNSANPILDGQTKVDLDFNDVE--LSSERCNL 183
           +K+  R   F R  N  + +              +     ++D++++ ++  LS E  N 
Sbjct: 100 KKDVARKFSFRRESNDLELEN-------------LFVNNGEMDVNYSAIKPGLSLEHYNA 146

Query: 184 ILEQLEKSNDSRALSFFDWMKVNGKLKNNVTAYNSILRVLGRKGDWDGAE 333
           IL++LE  +D+ A+ FFDWM+  GKL+ N  AY+ ILRVLGR+ +W+ AE
Sbjct: 147 ILKRLESCSDTNAIKFFDWMRCKGKLEGNFGAYSLILRVLGRREEWNRAE 196